RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TTC14Q96N46 770 aa13.94□□□□□ -0.18
SRRM4-201ENST00000267260 MROH2BQ7Z745 1585 aa13.94□□□□□ -0.18
SRRM4-201ENST00000267260 RAB11FIP3O75154 756 aa13.94□□□□□ -0.18
SRRM4-201ENST00000267260 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
SRRM4-201ENST00000267260 DRC1Q96MC2 740 aa13.93□□□□□ -0.18
SRRM4-201ENST00000267260 GTPBP4Q9BZE4 634 aaKnown RBP13.93□□□□□ -0.18
SRRM4-201ENST00000267260 STX1AQ16623 288 aa13.93□□□□□ -0.18
SRRM4-201ENST00000267260 AACSQ86V21 672 aa13.93□□□□□ -0.18
SRRM4-201ENST00000267260 MKRN1Q9UHC7 482 aaKnown RBP13.93□□□□□ -0.18
SRRM4-201ENST00000267260 GOLIM4O00461 696 aa13.93□□□□□ -0.18
SRRM4-201ENST00000267260 PPM1FP49593 454 aaPredicted RBP13.93□□□□□ -0.18
SRRM4-201ENST00000267260 SNW1Q13573 536 aaKnown RBP13.93□□□□□ -0.18
SRRM4-201ENST00000267260 FAM184BQ9ULE4 1060 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 ACTN2P35609 894 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 MVPQ14764 893 aaKnown RBP13.92□□□□□ -0.18
SRRM4-201ENST00000267260 GBP6Q6ZN66 633 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 ABTB2Q8N961 1025 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 CCDC121Q6ZUS5 278 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 CEP57Q86XR8 500 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 HECW1Q76N89 1606 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 MACROD2A1Z1Q3 448 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 MTHFSP49914 203 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 ARFGAP3Q9NP61 516 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 FEZ2Q9UHY8 353 aaPredicted RBP13.92□□□□□ -0.18
SRRM4-201ENST00000267260 ERICH3Q5RHP9 1530 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 ATF7IPQ6VMQ6 1270 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 RASAL2Q9UJF2 1139 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
SRRM4-201ENST00000267260 IQCGQ9H095 443 aaKnown RBP13.92□□□□□ -0.18
SRRM4-201ENST00000267260 CCDC171Q6TFL3 1326 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 DNAJC21Q5F1R6 531 aaKnown RBP13.91□□□□□ -0.18
SRRM4-201ENST00000267260 CWC27Q6UX04 472 aaKnown RBP13.91□□□□□ -0.18
SRRM4-201ENST00000267260 SPDYE4A6NLX3 237 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 HMGB1P1B2RPK0 211 aaPredicted RBP13.91□□□□□ -0.18
SRRM4-201ENST00000267260 CEP120Q8N960 986 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 TACC1O75410 805 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 SELENOOQ9BVL4 669 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 STIM2Q9P246 746 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 CAMK4Q16566 473 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 CEP135Q66GS9 1140 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 CWC25Q9NXE8 425 aaPredicted RBP13.91□□□□□ -0.18
SRRM4-201ENST00000267260 LRP2BPQ9P2M1 347 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 A0A1B0GUA9 196 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 TATP17735 454 aaPredicted RBP13.91□□□□□ -0.18
SRRM4-201ENST00000267260 ZFP91Q96JP5 570 aaPredicted RBP13.91□□□□□ -0.18
SRRM4-201ENST00000267260 PRPHP41219 470 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 RPUSD2Q8IZ73 545 aaKnown RBP13.91□□□□□ -0.18
SRRM4-201ENST00000267260 CUL5Q93034 780 aa13.91□□□□□ -0.18
SRRM4-201ENST00000267260 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
SRRM4-201ENST00000267260 RSPH14Q9UHP6 348 aa13.9□□□□□ -0.18
SRRM4-201ENST00000267260 OPA1O60313 960 aa13.9□□□□□ -0.18
SRRM4-201ENST00000267260 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
SRRM4-201ENST00000267260 MAP7D1Q3KQU3 841 aa13.9□□□□□ -0.18
SRRM4-201ENST00000267260 SUDS3Q9H7L9 328 aaPredicted RBP13.9□□□□□ -0.18
SRRM4-201ENST00000267260 MICALL1Q8N3F8 863 aa13.9□□□□□ -0.18
SRRM4-201ENST00000267260 AIDAQ96BJ3 306 aa13.9□□□□□ -0.18
SRRM4-201ENST00000267260 USP5P45974 858 aa13.9□□□□□ -0.18
SRRM4-201ENST00000267260 TDRD12Q587J7 1177 aaKnown RBP13.9□□□□□ -0.18
SRRM4-201ENST00000267260 ZSCAN29Q8IWY8 852 aaPredicted RBP13.9□□□□□ -0.18
SRRM4-201ENST00000267260 WDHD1O75717 1129 aaPredicted RBP13.89□□□□□ -0.19
SRRM4-201ENST00000267260 TCP11L2Q8N4U5 519 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 LRRC27Q9C0I9 530 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 CABP4P57796 275 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 KLHL10Q6JEL2 608 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 C8orf76Q96K31 380 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 SCLT1Q96NL6 688 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 JADE2Q9NQC1 790 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 TMOD2Q9NZR1 351 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 TPD52P55327 224 aaPredicted RBP13.89□□□□□ -0.19
SRRM4-201ENST00000267260 CFAP58Q5T655 872 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 TBC1D5Q92609 795 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 C1orf115Q9H7X2 142 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 SPG7Q9UQ90 795 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 CNNM3Q8NE01 707 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 CCDC12Q8WUD4 166 aaPredicted RBP13.89□□□□□ -0.19
SRRM4-201ENST00000267260 MAP3K9P80192 1104 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 OTUD6BQ8N6M0 293 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 KIAA0753Q2KHM9 967 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 CALML4Q96GE6 196 aa13.89□□□□□ -0.19
SRRM4-201ENST00000267260 APBB1IPQ7Z5R6 666 aaPredicted RBP13.88□□□□□ -0.19
SRRM4-201ENST00000267260 SIL1Q9H173 461 aa13.88□□□□□ -0.19
SRRM4-201ENST00000267260 BAG4O95429 457 aaKnown RBP13.88□□□□□ -0.19
SRRM4-201ENST00000267260 CCDC110Q8TBZ0 833 aa13.88□□□□□ -0.19
SRRM4-201ENST00000267260 DDX19AQ9NUU7 478 aaKnown RBP13.88□□□□□ -0.19
SRRM4-201ENST00000267260 ADAMTS8Q9UP79 889 aa13.88□□□□□ -0.19
SRRM4-201ENST00000267260 EBAG9O00559 213 aa13.88□□□□□ -0.19
SRRM4-201ENST00000267260 NLRP6P59044 892 aa13.88□□□□□ -0.19
SRRM4-201ENST00000267260 IGHMBP2P38935 993 aaKnown RBP13.88□□□□□ -0.19
SRRM4-201ENST00000267260 CEP126Q9P2H0 1117 aa13.88□□□□□ -0.19
SRRM4-201ENST00000267260 TCHPQ9BT92 498 aa13.88□□□□□ -0.19
SRRM4-201ENST00000267260 SETD1BQ9UPS6 1966 aaKnown RBP13.88□□□□□ -0.19
SRRM4-201ENST00000267260 MAP4K4O95819 1239 aaPredicted RBP13.88□□□□□ -0.19
SRRM4-201ENST00000267260 PSMC4P43686 418 aa13.87□□□□□ -0.19
SRRM4-201ENST00000267260 NAA25Q14CX7 972 aa13.87□□□□□ -0.19
SRRM4-201ENST00000267260 RBM28Q9NW13 759 aaKnown RBP13.87□□□□□ -0.19
SRRM4-201ENST00000267260 DNA2P51530 1060 aa13.87□□□□□ -0.19
SRRM4-201ENST00000267260 CTAGE1Q96RT6 745 aa13.87□□□□□ -0.19
SRRM4-201ENST00000267260 ATP2C2O75185 946 aa13.87□□□□□ -0.19
SRRM4-201ENST00000267260 IQCA1Q86XH1 822 aa13.87□□□□□ -0.19
SRRM4-201ENST00000267260 FGD6Q6ZV73 1430 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms