RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 USP44Q9H0E7 712 aa15.25■□□□□ 0.03
BEST3-201ENST00000266661 CEMIPQ8WUJ3 1361 aa15.25■□□□□ 0.03
BEST3-201ENST00000266661 ZNF445P59923 1031 aa15.25■□□□□ 0.03
BEST3-201ENST00000266661 ABTB2Q8N961 1025 aa15.25■□□□□ 0.03
BEST3-201ENST00000266661 AOX1Q06278 1338 aa15.24■□□□□ 0.03
BEST3-201ENST00000266661 MX1P20591 662 aa15.24■□□□□ 0.03
BEST3-201ENST00000266661 CHMLP26374 656 aa15.24■□□□□ 0.03
BEST3-201ENST00000266661 PPP1R9BQ96SB3 815 aa15.24■□□□□ 0.03
BEST3-201ENST00000266661 FKBP5Q13451 457 aaPredicted RBP15.23■□□□□ 0.03
BEST3-201ENST00000266661 CUL4AQ13619 759 aa15.23■□□□□ 0.03
BEST3-201ENST00000266661 SSH3Q8TE77 659 aa15.23■□□□□ 0.03
BEST3-201ENST00000266661 TNS3Q68CZ2 1445 aa15.23■□□□□ 0.03
BEST3-201ENST00000266661 ERBB4Q15303 1308 aa15.23■□□□□ 0.03
BEST3-201ENST00000266661 ANAPC15P60006 121 aa15.23■□□□□ 0.03
BEST3-201ENST00000266661 DDX49Q9Y6V7 483 aaKnown RBP15.23■□□□□ 0.03
BEST3-201ENST00000266661 EPB41L2O43491 1005 aaKnown RBP15.22■□□□□ 0.03
BEST3-201ENST00000266661 POLA2Q14181 598 aa15.22■□□□□ 0.03
BEST3-201ENST00000266661 TSHZ3Q63HK5 1081 aa15.22■□□□□ 0.03
BEST3-201ENST00000266661 SRCIN1Q9C0H9 1055 aa15.22■□□□□ 0.03
BEST3-201ENST00000266661 LRRFIP2Q9Y608 721 aaKnown RBP15.22■□□□□ 0.03
BEST3-201ENST00000266661 JCADQ9P266 1359 aa15.22■□□□□ 0.03
BEST3-201ENST00000266661 AK9Q5TCS8 1911 aa15.21■□□□□ 0.03
BEST3-201ENST00000266661 MCTP1Q6DN14 999 aa15.21■□□□□ 0.03
BEST3-201ENST00000266661 UNC5CLQ8IV45 518 aa15.2■□□□□ 0.02
BEST3-201ENST00000266661 TMX3Q96JJ7 454 aa15.2■□□□□ 0.02
BEST3-201ENST00000266661 PALD1Q9ULE6 856 aa15.2■□□□□ 0.02
BEST3-201ENST00000266661 ABCA3Q99758 1704 aa15.2■□□□□ 0.02
BEST3-201ENST00000266661 NFAT5O94916 1531 aa15.2■□□□□ 0.02
BEST3-201ENST00000266661 LRP6O75581 1613 aa15.2■□□□□ 0.02
BEST3-201ENST00000266661 CRYBG1Q9Y4K1 1723 aa15.2■□□□□ 0.02
BEST3-201ENST00000266661 ESPNB1AK53 854 aa15.2■□□□□ 0.02
BEST3-201ENST00000266661 ADAMTS2O95450 1211 aa15.2■□□□□ 0.02
BEST3-201ENST00000266661 MCM2P49736 904 aa15.2■□□□□ 0.02
BEST3-201ENST00000266661 COL22A1Q8NFW1 1626 aaPredicted RBP15.18■□□□□ 0.02
BEST3-201ENST00000266661 HOXB7P09629 217 aa15.18■□□□□ 0.02
BEST3-201ENST00000266661 NEK4P51957 841 aa15.18■□□□□ 0.02
BEST3-201ENST00000266661 GPT2Q8TD30 523 aa15.18■□□□□ 0.02
BEST3-201ENST00000266661 IP6K1Q92551 441 aa15.18■□□□□ 0.02
BEST3-201ENST00000266661 NECTIN2Q92692 538 aa15.18■□□□□ 0.02
BEST3-201ENST00000266661 PHAXQ9H814 394 aaKnown RBP15.18■□□□□ 0.02
BEST3-201ENST00000266661 KDM3BQ7LBC6 1761 aa15.18■□□□□ 0.02
BEST3-201ENST00000266661 BRD1O95696 1058 aa15.18■□□□□ 0.02
BEST3-201ENST00000266661 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
BEST3-201ENST00000266661 ZSCAN23Q3MJ62 389 aa15.18■□□□□ 0.02
BEST3-201ENST00000266661 INTS4Q96HW7 963 aaKnown RBP15.18■□□□□ 0.02
BEST3-201ENST00000266661 IL25Q9H293 177 aa15.18■□□□□ 0.02
BEST3-201ENST00000266661 PHRF1Q9P1Y6 1649 aaKnown RBP15.17■□□□□ 0.02
BEST3-201ENST00000266661 RAB11FIP3O75154 756 aa15.17■□□□□ 0.02
BEST3-201ENST00000266661 UBTFL1P0CB47 393 aaPredicted RBP15.17■□□□□ 0.02
BEST3-201ENST00000266661 CCDC173Q0VFZ6 552 aa15.17■□□□□ 0.02
BEST3-201ENST00000266661 HDGFL1Q5TGJ6 251 aa15.17■□□□□ 0.02
BEST3-201ENST00000266661 PI4K2BQ8TCG2 481 aa15.16■□□□□ 0.02
BEST3-201ENST00000266661 NCAPD2Q15021 1401 aa15.16■□□□□ 0.02
BEST3-201ENST00000266661 NASPP49321 788 aaPredicted RBP15.16■□□□□ 0.02
BEST3-201ENST00000266661 ZC3H6P61129 1189 aaKnown RBP15.16■□□□□ 0.02
BEST3-201ENST00000266661 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
BEST3-201ENST00000266661 PPP1R42Q7Z4L9 355 aa15.16■□□□□ 0.02
BEST3-201ENST00000266661 LTN1O94822 1766 aa15.16■□□□□ 0.02
BEST3-201ENST00000266661 PRPF40AO75400 957 aaKnown RBP15.15■□□□□ 0.02
BEST3-201ENST00000266661 NBPF6Q5VWK0 638 aa15.15■□□□□ 0.02
BEST3-201ENST00000266661 CAVIN1Q6NZI2 390 aaKnown RBP15.15■□□□□ 0.02
BEST3-201ENST00000266661 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
BEST3-201ENST00000266661 NBPF4Q96M43 638 aa15.15■□□□□ 0.02
BEST3-201ENST00000266661 USP42Q9H9J4 1324 aaKnown RBP15.15■□□□□ 0.02
BEST3-201ENST00000266661 LMO7Q8WWI1 1683 aa15.15■□□□□ 0.02
BEST3-201ENST00000266661 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
BEST3-201ENST00000266661 MCCP23508 829 aa15.14■□□□□ 0.01
BEST3-201ENST00000266661 HSPA4P34932 840 aa15.14■□□□□ 0.01
BEST3-201ENST00000266661 RHPN1Q8TCX5 695 aa15.14■□□□□ 0.01
BEST3-201ENST00000266661 LTV1Q96GA3 475 aaPredicted RBP15.14■□□□□ 0.01
BEST3-201ENST00000266661 LGR6Q9HBX8 967 aa15.14■□□□□ 0.01
BEST3-201ENST00000266661 RGPD5Q99666 1765 aa15.14■□□□□ 0.01
BEST3-201ENST00000266661 RILPL2Q969X0 211 aa15.14■□□□□ 0.01
BEST3-201ENST00000266661 CHAMP1Q96JM3 812 aa15.14■□□□□ 0.01
BEST3-201ENST00000266661 RBSNQ9H1K0 784 aa15.14■□□□□ 0.01
BEST3-201ENST00000266661 ANO2Q9NQ90 1003 aa15.14■□□□□ 0.01
BEST3-201ENST00000266661 PDLIM2Q96JY6 352 aa15.13■□□□□ 0.01
BEST3-201ENST00000266661 IL1RAPL2Q9NP60 686 aa15.13■□□□□ 0.01
BEST3-201ENST00000266661 TRIM6-TRIM34B2RNG4 842 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 KCNQ3O43525 872 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 GCP02774 474 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 NBPF7P0C2Y1 421 aaPredicted RBP15.12■□□□□ 0.01
BEST3-201ENST00000266661 MTX1Q13505 466 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 CHRNA2Q15822 529 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 C8orf37Q96NL8 207 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 TMEM63CQ9P1W3 806 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 NSFL1CQ9UNZ2 370 aaKnown RBP15.12■□□□□ 0.01
BEST3-201ENST00000266661 SPATA31A6Q5VVP1 1343 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 ADCY9O60503 1353 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 HEG1Q9ULI3 1381 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 SGSM2O43147 1006 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 NUTM1Q86Y26 1132 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 DNAAF4Q8WXU2 420 aa15.12■□□□□ 0.01
BEST3-201ENST00000266661 SURF6O75683 361 aaKnown RBP15.11■□□□□ 0.01
BEST3-201ENST00000266661 PRIM1P49642 420 aaKnown RBP15.11■□□□□ 0.01
BEST3-201ENST00000266661 MEX3CQ5U5Q3 659 aaKnown RBP15.11■□□□□ 0.01
BEST3-201ENST00000266661 KIF1BPQ96EK5 621 aa15.11■□□□□ 0.01
BEST3-201ENST00000266661 CHPF2Q9P2E5 772 aa15.11■□□□□ 0.01
BEST3-201ENST00000266661 RBM27Q9P2N5 1060 aaKnown RBP15.11■□□□□ 0.01
BEST3-201ENST00000266661 TRIM44Q96DX7 344 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms