RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 PPP1R42Q7Z4L9 355 aa12.59□□□□□ -0.39
LSG1-201ENST00000265245 AOX1Q06278 1338 aa12.59□□□□□ -0.39
LSG1-201ENST00000265245 SURF6O75683 361 aaKnown RBP12.59□□□□□ -0.39
LSG1-201ENST00000265245 MPRIPQ6WCQ1 1025 aa12.59□□□□□ -0.39
LSG1-201ENST00000265245 CLEC17AQ6ZS10 378 aa12.59□□□□□ -0.39
LSG1-201ENST00000265245 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
LSG1-201ENST00000265245 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
LSG1-201ENST00000265245 XPCQ01831 940 aaPredicted RBP12.59□□□□□ -0.39
LSG1-201ENST00000265245 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
LSG1-201ENST00000265245 ORAI2Q96SN7 254 aa12.59□□□□□ -0.39
LSG1-201ENST00000265245 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
LSG1-201ENST00000265245 IL1RAPL2Q9NP60 686 aa12.58□□□□□ -0.4
LSG1-201ENST00000265245 LTN1O94822 1766 aa12.58□□□□□ -0.4
LSG1-201ENST00000265245 ANO2Q9NQ90 1003 aa12.58□□□□□ -0.4
LSG1-201ENST00000265245 CACNA1FO60840 1977 aa12.58□□□□□ -0.4
LSG1-201ENST00000265245 CHMLP26374 656 aa12.58□□□□□ -0.4
LSG1-201ENST00000265245 FAM43AQ8N2R8 423 aa12.58□□□□□ -0.4
LSG1-201ENST00000265245 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
LSG1-201ENST00000265245 KCNQ3O43525 872 aa12.57□□□□□ -0.4
LSG1-201ENST00000265245 BAG4O95429 457 aaKnown RBP12.57□□□□□ -0.4
LSG1-201ENST00000265245 MCM2P49736 904 aa12.57□□□□□ -0.4
LSG1-201ENST00000265245 ANKRD24Q8TF21 1146 aa12.57□□□□□ -0.4
LSG1-201ENST00000265245 MED1Q15648 1581 aaPredicted RBP12.57□□□□□ -0.4
LSG1-201ENST00000265245 NCAPD2Q15021 1401 aa12.57□□□□□ -0.4
LSG1-201ENST00000265245 NEK4P51957 841 aa12.57□□□□□ -0.4
LSG1-201ENST00000265245 POLA2Q14181 598 aa12.57□□□□□ -0.4
LSG1-201ENST00000265245 HSP90AB4PQ58FF6 505 aa12.57□□□□□ -0.4
LSG1-201ENST00000265245 BEND3Q5T5X7 828 aa12.57□□□□□ -0.4
LSG1-201ENST00000265245 KIF1BPQ96EK5 621 aa12.57□□□□□ -0.4
LSG1-201ENST00000265245 RNMTO43148 476 aaKnown RBP12.56□□□□□ -0.4
LSG1-201ENST00000265245 ANAPC15P60006 121 aa12.56□□□□□ -0.4
LSG1-201ENST00000265245 NBPF7P0C2Y1 421 aaPredicted RBP12.56□□□□□ -0.4
LSG1-201ENST00000265245 RHPN1Q8TCX5 695 aa12.56□□□□□ -0.4
LSG1-201ENST00000265245 GRPEL1Q9HAV7 217 aa12.56□□□□□ -0.4
LSG1-201ENST00000265245 HDAC5Q9UQL6 1122 aa12.55□□□□□ -0.4
LSG1-201ENST00000265245 ANXA1P04083 346 aa12.55□□□□□ -0.4
LSG1-201ENST00000265245 NUTM1Q86Y26 1132 aa12.55□□□□□ -0.4
LSG1-201ENST00000265245 DDX49Q9Y6V7 483 aaKnown RBP12.55□□□□□ -0.4
LSG1-201ENST00000265245 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
LSG1-201ENST00000265245 OS9Q13438 667 aaPredicted RBP12.54□□□□□ -0.4
LSG1-201ENST00000265245 CYP2E1P05181 493 aaPredicted RBP12.54□□□□□ -0.4
LSG1-201ENST00000265245 KLHL40Q2TBA0 621 aa12.54□□□□□ -0.4
LSG1-201ENST00000265245 KRT28Q7Z3Y7 464 aa12.54□□□□□ -0.4
LSG1-201ENST00000265245 PROSER2Q86WR7 435 aaPredicted RBP12.54□□□□□ -0.4
LSG1-201ENST00000265245 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
LSG1-201ENST00000265245 PANK2Q9BZ23 570 aa12.54□□□□□ -0.4
LSG1-201ENST00000265245 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
LSG1-201ENST00000265245 PHRF1Q9P1Y6 1649 aaKnown RBP12.54□□□□□ -0.4
LSG1-201ENST00000265245 EPB41L2O43491 1005 aaKnown RBP12.54□□□□□ -0.4
LSG1-201ENST00000265245 UNC5CLQ8IV45 518 aa12.54□□□□□ -0.4
LSG1-201ENST00000265245 C9orf78Q9NZ63 289 aaPredicted RBP12.54□□□□□ -0.4
LSG1-201ENST00000265245 GIGYF1O75420 1035 aaPredicted RBP12.53□□□□□ -0.4
LSG1-201ENST00000265245 HSPA2P54652 639 aa12.53□□□□□ -0.4
LSG1-201ENST00000265245 MCTP1Q6DN14 999 aa12.53□□□□□ -0.4
LSG1-201ENST00000265245 ADCY9O60503 1353 aa12.53□□□□□ -0.4
LSG1-201ENST00000265245 ALDH1L1O75891 902 aa12.53□□□□□ -0.4
LSG1-201ENST00000265245 TMX3Q96JJ7 454 aa12.53□□□□□ -0.4
LSG1-201ENST00000265245 DCCP43146 1447 aa12.53□□□□□ -0.4
LSG1-201ENST00000265245 SLIT3O75094 1523 aa12.53□□□□□ -0.4
LSG1-201ENST00000265245 MAP3K2Q9Y2U5 619 aa12.53□□□□□ -0.4
LSG1-201ENST00000265245 N4BP2Q86UW6 1770 aaPredicted RBP12.52□□□□□ -0.4
LSG1-201ENST00000265245 PXDNQ92626 1479 aa12.52□□□□□ -0.4
LSG1-201ENST00000265245 KSR2Q6VAB6 950 aa12.52□□□□□ -0.4
LSG1-201ENST00000265245 CNTROBQ8N137 903 aa12.52□□□□□ -0.4
LSG1-201ENST00000265245 PKP1Q13835 747 aa12.52□□□□□ -0.41
LSG1-201ENST00000265245 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
LSG1-201ENST00000265245 PALD1Q9ULE6 856 aa12.52□□□□□ -0.41
LSG1-201ENST00000265245 DDX58O95786 925 aaKnown RBP12.51□□□□□ -0.41
LSG1-201ENST00000265245 MTX1Q13505 466 aa12.51□□□□□ -0.41
LSG1-201ENST00000265245 CLASRPQ8N2M8 674 aaKnown RBP12.51□□□□□ -0.41
LSG1-201ENST00000265245 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
LSG1-201ENST00000265245 PI4K2BQ8TCG2 481 aa12.51□□□□□ -0.41
LSG1-201ENST00000265245 C19orf44Q9H6X5 657 aa12.51□□□□□ -0.41
LSG1-201ENST00000265245 AXIN2Q9Y2T1 843 aa12.51□□□□□ -0.41
LSG1-201ENST00000265245 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
LSG1-201ENST00000265245 RAPGEF4Q8WZA2 1011 aa12.51□□□□□ -0.41
LSG1-201ENST00000265245 KDM3BQ7LBC6 1761 aa12.51□□□□□ -0.41
LSG1-201ENST00000265245 ERBB3P21860 1342 aa12.5□□□□□ -0.41
LSG1-201ENST00000265245 GLRX3O76003 335 aaKnown RBP12.5□□□□□ -0.41
LSG1-201ENST00000265245 MAP4K4O95819 1239 aaPredicted RBP12.5□□□□□ -0.41
LSG1-201ENST00000265245 ERC1Q8IUD2 1116 aa12.5□□□□□ -0.41
LSG1-201ENST00000265245 ZC3H6P61129 1189 aaKnown RBP12.5□□□□□ -0.41
LSG1-201ENST00000265245 PROSER3Q2NL68 480 aa12.5□□□□□ -0.41
LSG1-201ENST00000265245 GPATCH3Q96I76 525 aa12.5□□□□□ -0.41
LSG1-201ENST00000265245 TTC41PQ6P2S7 1318 aa12.5□□□□□ -0.41
LSG1-201ENST00000265245 HEG1Q9ULI3 1381 aa12.49□□□□□ -0.41
LSG1-201ENST00000265245 NCLP19338 710 aaKnown RBP12.49□□□□□ -0.41
LSG1-201ENST00000265245 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
LSG1-201ENST00000265245 DHX37Q8IY37 1157 aaKnown RBP12.49□□□□□ -0.41
LSG1-201ENST00000265245 IL17RAQ96F46 866 aa12.49□□□□□ -0.41
LSG1-201ENST00000265245 INTS4Q96HW7 963 aaKnown RBP12.49□□□□□ -0.41
LSG1-201ENST00000265245 GAS2L3Q86XJ1 694 aa12.49□□□□□ -0.41
LSG1-201ENST00000265245 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
LSG1-201ENST00000265245 UPF3BQ9BZI7 483 aaKnown RBP12.49□□□□□ -0.41
LSG1-201ENST00000265245 C1orf167Q5SNV9 1468 aa12.49□□□□□ -0.41
LSG1-201ENST00000265245 SGSM2O43147 1006 aa12.49□□□□□ -0.41
LSG1-201ENST00000265245 HSPA4P34932 840 aa12.49□□□□□ -0.41
LSG1-201ENST00000265245 CUL4AQ13619 759 aa12.49□□□□□ -0.41
LSG1-201ENST00000265245 DDX21Q9NR30 783 aaKnown RBP eCLIP12.49□□□□□ -0.41
LSG1-201ENST00000265245 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms