RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 USP26Q9BXU7 913 aa15.08■□□□□ 0
HERC6-201ENST00000264346 CWC22Q9HCG8 908 aaKnown RBP15.08■□□□□ 0
HERC6-201ENST00000264346 A2ML1A8K2U0 1454 aa15.08■□□□□ 0
HERC6-201ENST00000264346 ESPNB1AK53 854 aa15.07■□□□□ 0
HERC6-201ENST00000264346 FKBP4Q02790 459 aaKnown RBP eCLIP15.07■□□□□ 0
HERC6-201ENST00000264346 ESYT1Q9BSJ8 1104 aa15.07■□□□□ 0
HERC6-201ENST00000264346 MAP3K5Q99683 1374 aa15.07■□□□□ 0
HERC6-201ENST00000264346 LAMC1P11047 1609 aa15.07■□□□□ 0
HERC6-201ENST00000264346 SBNO1A3KN83 1393 aa15.07■□□□□ 0
HERC6-201ENST00000264346 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
HERC6-201ENST00000264346 STK11IPQ8N1F8 1099 aa15.07■□□□□ 0
HERC6-201ENST00000264346 A0A087WZG4 1122 aa15.07■□□□□ 0
HERC6-201ENST00000264346 ZNF853P0CG23 659 aa15.07■□□□□ 0
HERC6-201ENST00000264346 MCM2P49736 904 aa15.07■□□□□ 0
HERC6-201ENST00000264346 SF3A1Q15459 793 aaKnown RBP15.07■□□□□ 0
HERC6-201ENST00000264346 XAGE3Q8WTP9 111 aa15.07■□□□□ 0
HERC6-201ENST00000264346 BCL11BQ9C0K0 894 aaPredicted RBP15.07■□□□□ 0
HERC6-201ENST00000264346 ARHGAP31Q2M1Z3 1444 aa15.06■□□□□ 0
HERC6-201ENST00000264346 PHF14O94880 888 aa15.06■□□□□ 0
HERC6-201ENST00000264346 RBM25P49756 843 aaKnown RBP15.06■□□□□ 0
HERC6-201ENST00000264346 IP6K1Q92551 441 aa15.06■□□□□ 0
HERC6-201ENST00000264346 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.06■□□□□ 0
HERC6-201ENST00000264346 RRP9O43818 475 aaKnown RBP15.06■□□□□ 0
HERC6-201ENST00000264346 PDRG1Q9NUG6 133 aa15.06■□□□□ 0
HERC6-201ENST00000264346 ALKQ9UM73 1620 aa15.05■□□□□ 0
HERC6-201ENST00000264346 DDX11Q96FC9 970 aa15.05■□□□□ 0
HERC6-201ENST00000264346 LARP1Q6PKG0 1096 aaKnown RBP15.05■□□□□ -0
HERC6-201ENST00000264346 RAB11FIP3O75154 756 aa15.05■□□□□ -0
HERC6-201ENST00000264346 R3HCC1Q9Y3T6 440 aaKnown RBP15.05■□□□□ -0
HERC6-201ENST00000264346 RTL1A6NKG5 1358 aa15.05■□□□□ -0
HERC6-201ENST00000264346 ECHDC1Q9NTX5 307 aa15.04■□□□□ -0
HERC6-201ENST00000264346 FAM135BQ49AJ0 1406 aa15.04■□□□□ -0
HERC6-201ENST00000264346 SNX21Q969T3 373 aa15.04■□□□□ -0
HERC6-201ENST00000264346 MROH2AA6NES4 1674 aa15.04■□□□□ -0
HERC6-201ENST00000264346 AKAP4Q5JQC9 854 aa15.04■□□□□ -0
HERC6-201ENST00000264346 BLOC1S2Q6QNY1 142 aa15.04■□□□□ -0
HERC6-201ENST00000264346 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
HERC6-201ENST00000264346 LARP1BQ659C4 914 aaKnown RBP15.03■□□□□ -0
HERC6-201ENST00000264346 NECAB1Q8N987 351 aa15.03■□□□□ -0
HERC6-201ENST00000264346 USP44Q9H0E7 712 aa15.03■□□□□ -0
HERC6-201ENST00000264346 PKP1Q13835 747 aa15.03■□□□□ -0
HERC6-201ENST00000264346 CSPP1Q1MSJ5 1256 aa15.03■□□□□ -0
HERC6-201ENST00000264346 SNRKQ9NRH2 765 aa15.03■□□□□ -0
HERC6-201ENST00000264346 HYPKQ9NX55 129 aa15.03■□□□□ -0
HERC6-201ENST00000264346 NDUFB9Q9Y6M9 179 aa15.03■□□□□ -0
HERC6-201ENST00000264346 PRAMEF22A3QJZ6 481 aa15.02■□□□□ -0
HERC6-201ENST00000264346 CHMLP26374 656 aa15.02■□□□□ -0
HERC6-201ENST00000264346 ZHX1Q9UKY1 873 aaPredicted RBP15.02□□□□□ -0.01
HERC6-201ENST00000264346 DIP2CQ9Y2E4 1556 aa15.02□□□□□ -0.01
HERC6-201ENST00000264346 WDR33Q9C0J8 1336 aaKnown RBP15.02□□□□□ -0.01
HERC6-201ENST00000264346 GPTP24298 496 aa15.02□□□□□ -0.01
HERC6-201ENST00000264346 PTPRMP28827 1452 aa15.02□□□□□ -0.01
HERC6-201ENST00000264346 NEXMIFQ5QGS0 1516 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 CPLX1O14810 134 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 ANKRD13DQ6ZTN6 518 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 ATP7BP35670 1465 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 ADGRB1O14514 1584 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 GRM8O00222 908 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 RNMTO43148 476 aaKnown RBP15.01□□□□□ -0.01
HERC6-201ENST00000264346 MBD3O95983 291 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 PSMA5P28066 241 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 DDX46Q7L014 1031 aaKnown RBP15.01□□□□□ -0.01
HERC6-201ENST00000264346 CAMSAP1Q5T5Y3 1602 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 USP6P35125 1406 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 RAB3GAP1Q15042 981 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 KSR2Q6VAB6 950 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 IFNL2Q8IZJ0 200 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 LRRC2Q9BYS8 371 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 LMTK2Q8IWU2 1503 aa15.01□□□□□ -0.01
HERC6-201ENST00000264346 SOS1Q07889 1333 aaPredicted RBP15□□□□□ -0.01
HERC6-201ENST00000264346 AATKQ6ZMQ8 1374 aa15□□□□□ -0.01
HERC6-201ENST00000264346 HTATSF1O43719 755 aaKnown RBP15□□□□□ -0.01
HERC6-201ENST00000264346 UNC5CLQ8IV45 518 aa15□□□□□ -0.01
HERC6-201ENST00000264346 NUTM2BA6NNL0 878 aaPredicted RBP15□□□□□ -0.01
HERC6-201ENST00000264346 NUTM2EB1AL46 878 aaPredicted RBP15□□□□□ -0.01
HERC6-201ENST00000264346 NUTM2AQ8IVF1 878 aaPredicted RBP15□□□□□ -0.01
HERC6-201ENST00000264346 LRRC7Q96NW7 1537 aa14.99□□□□□ -0.01
HERC6-201ENST00000264346 PROSER3Q2NL68 480 aa14.99□□□□□ -0.01
HERC6-201ENST00000264346 SETBP1Q9Y6X0 1596 aa14.99□□□□□ -0.01
HERC6-201ENST00000264346 CCDC57Q2TAC2 916 aa14.99□□□□□ -0.01
HERC6-201ENST00000264346 PALD1Q9ULE6 856 aa14.99□□□□□ -0.01
HERC6-201ENST00000264346 EIF4A1P60842 406 aaKnown RBP14.99□□□□□ -0.01
HERC6-201ENST00000264346 SIRT1Q96EB6 747 aa14.99□□□□□ -0.01
HERC6-201ENST00000264346 FMNL2Q96PY5 1086 aa14.99□□□□□ -0.01
HERC6-201ENST00000264346 CNNM1Q9NRU3 951 aa14.99□□□□□ -0.01
HERC6-201ENST00000264346 TFIP11Q9UBB9 837 aaKnown RBP14.99□□□□□ -0.01
HERC6-201ENST00000264346 SPC24Q8NBT2 197 aa14.98□□□□□ -0.01
HERC6-201ENST00000264346 BICC1Q9H694 974 aaKnown RBP14.98□□□□□ -0.01
HERC6-201ENST00000264346 ISY1Q9ULR0 285 aaKnown RBP14.98□□□□□ -0.01
HERC6-201ENST00000264346 PNPLA6Q8IY17 1366 aa14.98□□□□□ -0.01
HERC6-201ENST00000264346 CLCN1P35523 988 aa14.98□□□□□ -0.01
HERC6-201ENST00000264346 CAMK4Q16566 473 aa14.98□□□□□ -0.01
HERC6-201ENST00000264346 TSPY26PQ9H489 355 aa14.98□□□□□ -0.01
HERC6-201ENST00000264346 ANTXR1Q9H6X2 564 aa14.98□□□□□ -0.01
HERC6-201ENST00000264346 CEP126Q9P2H0 1117 aa14.98□□□□□ -0.01
HERC6-201ENST00000264346 GUCY1B3Q02153 619 aa14.97□□□□□ -0.01
HERC6-201ENST00000264346 RALYLQ86SE5 291 aaKnown RBP14.97□□□□□ -0.01
HERC6-201ENST00000264346 GOLIM4O00461 696 aa14.97□□□□□ -0.01
HERC6-201ENST00000264346 LMBR1LQ6UX01 489 aa14.97□□□□□ -0.01
HERC6-201ENST00000264346 RAB11FIP4Q86YS3 637 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms