RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.35
PPM1F-201ENST00000263212 STK11IPQ8N1F8 1099 aa17.21■□□□□ 0.35
PPM1F-201ENST00000263212 CBX1P83916 185 aa17.21■□□□□ 0.35
PPM1F-201ENST00000263212 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
PPM1F-201ENST00000263212 IDH1O75874 414 aaKnown RBP17.21■□□□□ 0.34
PPM1F-201ENST00000263212 KIAA0754O94854 1291 aa17.21■□□□□ 0.34
PPM1F-201ENST00000263212 AIDAQ96BJ3 306 aa17.21■□□□□ 0.34
PPM1F-201ENST00000263212 IFIT1P09914 478 aaKnown RBP17.2■□□□□ 0.34
PPM1F-201ENST00000263212 ZNF165P49910 485 aa17.2■□□□□ 0.34
PPM1F-201ENST00000263212 SOGA3Q5TF21 947 aa17.2■□□□□ 0.34
PPM1F-201ENST00000263212 CD109Q6YHK3 1445 aa17.2■□□□□ 0.34
PPM1F-201ENST00000263212 TOP1P11387 765 aaKnown RBP17.2■□□□□ 0.34
PPM1F-201ENST00000263212 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
PPM1F-201ENST00000263212 STX1AQ16623 288 aa17.2■□□□□ 0.34
PPM1F-201ENST00000263212 PIK3R4Q99570 1358 aa17.2■□□□□ 0.34
PPM1F-201ENST00000263212 ZSCAN22P10073 491 aaPredicted RBP17.19■□□□□ 0.34
PPM1F-201ENST00000263212 PANK2Q9BZ23 570 aa17.19■□□□□ 0.34
PPM1F-201ENST00000263212 HMG20BQ9P0W2 317 aa17.19■□□□□ 0.34
PPM1F-201ENST00000263212 IKQ13123 557 aaPredicted RBP17.19■□□□□ 0.34
PPM1F-201ENST00000263212 RAB3GAP1Q15042 981 aa17.19■□□□□ 0.34
PPM1F-201ENST00000263212 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
PPM1F-201ENST00000263212 FSIP1Q8NA03 581 aa17.19■□□□□ 0.34
PPM1F-201ENST00000263212 C16orf45Q96MC5 204 aaPredicted RBP17.19■□□□□ 0.34
PPM1F-201ENST00000263212 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
PPM1F-201ENST00000263212 URI1O94763 535 aaPredicted RBP17.19■□□□□ 0.34
PPM1F-201ENST00000263212 PPP1R42Q7Z4L9 355 aa17.19■□□□□ 0.34
PPM1F-201ENST00000263212 STRN4Q9NRL3 753 aa17.19■□□□□ 0.34
PPM1F-201ENST00000263212 TFIP11Q9UBB9 837 aaKnown RBP17.19■□□□□ 0.34
PPM1F-201ENST00000263212 PDE1AP54750 535 aa17.19■□□□□ 0.34
PPM1F-201ENST00000263212 ARHGEF12Q9NZN5 1544 aa17.18■□□□□ 0.34
PPM1F-201ENST00000263212 MRPL50Q8N5N7 158 aaKnown RBP17.18■□□□□ 0.34
PPM1F-201ENST00000263212 CCDC102AQ96A19 550 aa17.18■□□□□ 0.34
PPM1F-201ENST00000263212 PUS7Q96PZ0 661 aaKnown RBP17.18■□□□□ 0.34
PPM1F-201ENST00000263212 MYD88Q99836 296 aa17.18■□□□□ 0.34
PPM1F-201ENST00000263212 HCLS1P14317 486 aaPredicted RBP17.18■□□□□ 0.34
PPM1F-201ENST00000263212 CCDC148Q8NFR7 591 aa17.18■□□□□ 0.34
PPM1F-201ENST00000263212 PER1O15534 1290 aaPredicted RBP17.18■□□□□ 0.34
PPM1F-201ENST00000263212 EIF5P55010 431 aaKnown RBP17.18■□□□□ 0.34
PPM1F-201ENST00000263212 HS1BP3Q53T59 392 aa17.18■□□□□ 0.34
PPM1F-201ENST00000263212 TANGO6Q9C0B7 1094 aa17.18■□□□□ 0.34
PPM1F-201ENST00000263212 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 PRM3Q9NNZ6 103 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 ESYT1Q9BSJ8 1104 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 RLBP1P12271 317 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 METTL24Q5JXM2 366 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 ZFYVE27Q5T4F4 411 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 MEIS3Q99687 375 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 BMP2KQ9NSY1 1161 aaPredicted RBP17.17■□□□□ 0.34
PPM1F-201ENST00000263212 KIF5CO60282 957 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 SYCP1Q15431 976 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 KIAA1328Q86T90 577 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 LARP6Q9BRS8 491 aaKnown RBP17.17■□□□□ 0.34
PPM1F-201ENST00000263212 LRP2BPQ9P2M1 347 aa17.17■□□□□ 0.34
PPM1F-201ENST00000263212 ZKSCAN5Q9Y2L8 839 aa17.16■□□□□ 0.34
PPM1F-201ENST00000263212 RHPN1Q8TCX5 695 aa17.16■□□□□ 0.34
PPM1F-201ENST00000263212 ERICH4A6NGS2 130 aa17.16■□□□□ 0.34
PPM1F-201ENST00000263212 ZSCAN16Q9H4T2 348 aaPredicted RBP17.16■□□□□ 0.34
PPM1F-201ENST00000263212 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
PPM1F-201ENST00000263212 ITSN2Q9NZM3 1697 aa17.16■□□□□ 0.34
PPM1F-201ENST00000263212 GUCY1B3Q02153 619 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 PRDM11Q9NQV5 511 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 PAXBP1Q9Y5B6 917 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 EIF2AK4Q9P2K8 1649 aaKnown RBP17.15■□□□□ 0.34
PPM1F-201ENST00000263212 PHAXQ9H814 394 aaKnown RBP17.15■□□□□ 0.34
PPM1F-201ENST00000263212 ZBTB40Q9NUA8 1239 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 RAI14Q9P0K7 980 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 DUOX2Q9NRD8 1548 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 CASQ1P31415 396 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 USP8P40818 1118 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 SKIDA1Q1XH10 827 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 RAPGEF6Q8TEU7 1601 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 TSHZ3Q63HK5 1081 aa17.15■□□□□ 0.34
PPM1F-201ENST00000263212 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
PPM1F-201ENST00000263212 NEK1Q96PY6 1258 aa17.14■□□□□ 0.33
PPM1F-201ENST00000263212 CRACR2AQ9BSW2 395 aa17.14■□□□□ 0.33
PPM1F-201ENST00000263212 DCTPP1Q9H773 170 aa17.14■□□□□ 0.33
PPM1F-201ENST00000263212 TRMT1Q9NXH9 659 aaKnown RBP17.14■□□□□ 0.33
PPM1F-201ENST00000263212 ZNF213O14771 459 aa17.14■□□□□ 0.33
PPM1F-201ENST00000263212 CFAP43Q8NDM7 1665 aa17.14■□□□□ 0.33
PPM1F-201ENST00000263212 KDM5BQ9UGL1 1544 aa17.14■□□□□ 0.33
PPM1F-201ENST00000263212 KIF4BQ2VIQ3 1234 aa17.14■□□□□ 0.33
PPM1F-201ENST00000263212 PRDM10Q9NQV6 1147 aa17.14■□□□□ 0.33
PPM1F-201ENST00000263212 POGZQ7Z3K3 1410 aa17.14■□□□□ 0.33
PPM1F-201ENST00000263212 GIMAP6Q6P9H5 292 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
PPM1F-201ENST00000263212 GOLGA6L9A6NEM1 432 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 ZC3H6P61129 1189 aaKnown RBP17.13■□□□□ 0.33
PPM1F-201ENST00000263212 MAP9Q49MG5 647 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 NAPBQ9H115 298 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 GOLGA8BA8MQT2 603 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 STARD3NLO95772 234 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 NOLC1Q14978 699 aaKnown RBP eCLIP17.13■□□□□ 0.332e-7■■■□□ 17.3
PPM1F-201ENST00000263212 CNNM3Q8NE01 707 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 TNNQ9UQP3 1299 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 IGHMBP2P38935 993 aaKnown RBP17.13■□□□□ 0.33
PPM1F-201ENST00000263212 USHBP1Q8N6Y0 703 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 FAM200AQ8TCP9 573 aa17.13■□□□□ 0.33
PPM1F-201ENST00000263212 FANCAO15360 1455 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms