RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 CCDC30Q5VVM6 783 aa31.34■■■□□ 2.61
SCN1B-201ENST00000262631 LAMB4A4D0S4 1761 aa31.34■■■□□ 2.61
SCN1B-201ENST00000262631 STARD3NLO95772 234 aa31.33■■■□□ 2.61
SCN1B-201ENST00000262631 A1BGP04217 495 aa31.33■■■□□ 2.61
SCN1B-201ENST00000262631 SLC27A3Q5K4L6 730 aa31.33■■■□□ 2.61
SCN1B-201ENST00000262631 ZNF428Q96B54 188 aa31.33■■■□□ 2.61
SCN1B-201ENST00000262631 CHPF2Q9P2E5 772 aa31.33■■■□□ 2.61
SCN1B-201ENST00000262631 CENPBP07199 599 aaPredicted RBP31.32■■■□□ 2.6
SCN1B-201ENST00000262631 CAMKK2Q96RR4 588 aa31.32■■■□□ 2.6
SCN1B-201ENST00000262631 BCAR3O75815 825 aa31.32■■■□□ 2.6
SCN1B-201ENST00000262631 PDIA6Q15084 440 aa31.32■■■□□ 2.6
SCN1B-201ENST00000262631 EZH2Q15910 746 aaKnown RBP31.32■■■□□ 2.6
SCN1B-201ENST00000262631 PROSER3Q2NL68 480 aa31.32■■■□□ 2.6
SCN1B-201ENST00000262631 UPF1Q92900 1129 aaKnown RBP eCLIP31.32■■■□□ 2.6
SCN1B-201ENST00000262631 ANXA1P04083 346 aa31.31■■■□□ 2.6
SCN1B-201ENST00000262631 CCDC125Q86Z20 511 aa31.31■■■□□ 2.6
SCN1B-201ENST00000262631 NBPF26B4DH59 902 aa31.3■■■□□ 2.6
SCN1B-201ENST00000262631 NBPF14Q5TI25 921 aa31.3■■■□□ 2.6
SCN1B-201ENST00000262631 NBPF10Q6P3W6 841 aaKnown RBP31.3■■■□□ 2.6
SCN1B-201ENST00000262631 NBPF15Q8N660 670 aa31.3■■■□□ 2.6
SCN1B-201ENST00000262631 CRKLP46109 303 aaKnown RBP31.29■■■□□ 2.6
SCN1B-201ENST00000262631 BAG6P46379 1132 aa31.29■■■□□ 2.6
SCN1B-201ENST00000262631 ALDH1L2Q3SY69 923 aa31.29■■■□□ 2.6
SCN1B-201ENST00000262631 SMC4Q9NTJ3 1288 aa31.29■■■□□ 2.6
SCN1B-201ENST00000262631 COL5A3P25940 1745 aaPredicted RBP31.29■■■□□ 2.6
SCN1B-201ENST00000262631 RGPD3A6NKT7 1758 aaPredicted RBP31.29■■■□□ 2.6
SCN1B-201ENST00000262631 RGPD4Q7Z3J3 1758 aa31.29■■■□□ 2.6
SCN1B-201ENST00000262631 INTS5Q6P9B9 1019 aaKnown RBP31.29■■■□□ 2.6
SCN1B-201ENST00000262631 SLC4A2P04920 1241 aa31.28■■■□□ 2.6
SCN1B-201ENST00000262631 ZBTB1Q9Y2K1 713 aa31.28■■■□□ 2.6
SCN1B-201ENST00000262631 MRPL50Q8N5N7 158 aaKnown RBP31.27■■■□□ 2.6
SCN1B-201ENST00000262631 STK31Q9BXU1 1019 aa31.27■■■□□ 2.6
SCN1B-201ENST00000262631 DBF4Q9UBU7 674 aaPredicted RBP31.27■■■□□ 2.6
SCN1B-201ENST00000262631 MYL6BP14649 208 aa31.26■■■□□ 2.6
SCN1B-201ENST00000262631 DDX21Q9NR30 783 aaKnown RBP eCLIP31.26■■■□□ 2.6
SCN1B-201ENST00000262631 SOCS7O14512 581 aa31.25■■■□□ 2.59
SCN1B-201ENST00000262631 LRP10Q7Z4F1 713 aa31.25■■■□□ 2.59
SCN1B-201ENST00000262631 CHMP4AQ9BY43 222 aa31.25■■■□□ 2.59
SCN1B-201ENST00000262631 CCDC87Q9NVE4 849 aa31.25■■■□□ 2.59
SCN1B-201ENST00000262631 TAF1LQ8IZX4 1826 aa31.25■■■□□ 2.59
SCN1B-201ENST00000262631 ERBB4Q15303 1308 aa31.24■■■□□ 2.59
SCN1B-201ENST00000262631 CNTNAP4Q9C0A0 1308 aa31.24■■■□□ 2.59
SCN1B-201ENST00000262631 CANXP27824 592 aaKnown RBP31.24■■■□□ 2.59
SCN1B-201ENST00000262631 G2E3Q7L622 706 aa31.24■■■□□ 2.59
SCN1B-201ENST00000262631 MYH14Q7Z406 1995 aaKnown RBP31.23■■■□□ 2.59
SCN1B-201ENST00000262631 PHAXQ9H814 394 aaKnown RBP31.22■■■□□ 2.59
SCN1B-201ENST00000262631 C4BP0C0L5 1744 aa31.21■■■□□ 2.59
SCN1B-201ENST00000262631 RC3H1Q5TC82 1133 aaKnown RBP31.21■■■□□ 2.59
SCN1B-201ENST00000262631 BRPF1P55201 1214 aaPredicted RBP31.2■■■□□ 2.59
SCN1B-201ENST00000262631 RREB1Q92766 1687 aa31.2■■■□□ 2.58
SCN1B-201ENST00000262631 SMIM5Q71RC9 77 aa31.19■■■□□ 2.58
SCN1B-201ENST00000262631 AMIGO3Q86WK7 504 aa31.19■■■□□ 2.58
SCN1B-201ENST00000262631 HYPKQ9NX55 129 aa31.19■■■□□ 2.58
SCN1B-201ENST00000262631 ZNF330Q9Y3S2 320 aaPredicted RBP31.19■■■□□ 2.58
SCN1B-201ENST00000262631 NOB1Q9ULX3 412 aaKnown RBP31.18■■■□□ 2.58
SCN1B-201ENST00000262631 GNPATO15228 680 aa31.17■■■□□ 2.58
SCN1B-201ENST00000262631 FLIIQ13045 1269 aa31.17■■■□□ 2.58
SCN1B-201ENST00000262631 IL6STP40189 918 aaPredicted RBP31.16■■■□□ 2.58
SCN1B-201ENST00000262631 ZNF827Q17R98 1081 aa31.16■■■□□ 2.58
SCN1B-201ENST00000262631 FRAT1Q92837 279 aaPredicted RBP31.16■■■□□ 2.58
SCN1B-201ENST00000262631 SUPT16HQ9Y5B9 1047 aaKnown RBP31.16■■■□□ 2.58
SCN1B-201ENST00000262631 EIF5P55010 431 aaKnown RBP31.16■■■□□ 2.58
SCN1B-201ENST00000262631 AIMP1Q12904 312 aaKnown RBP31.16■■■□□ 2.58
SCN1B-201ENST00000262631 XAGE3Q8WTP9 111 aa31.16■■■□□ 2.58
SCN1B-201ENST00000262631 AK7Q96M32 723 aa31.16■■■□□ 2.58
SCN1B-201ENST00000262631 PLIN1O60240 522 aa31.15■■■□□ 2.58
SCN1B-201ENST00000262631 COPS6Q7L5N1 327 aa31.15■■■□□ 2.58
SCN1B-201ENST00000262631 AKT1S1Q96B36 256 aa31.14■■■□□ 2.58
SCN1B-201ENST00000262631 ANO8Q9HCE9 1232 aaPredicted RBP31.14■■■□□ 2.58
SCN1B-201ENST00000262631 KIF16BQ96L93 1317 aa31.14■■■□□ 2.58
SCN1B-201ENST00000262631 RPS6KA4O75676 772 aa31.13■■■□□ 2.57
SCN1B-201ENST00000262631 TTLL7Q6ZT98 887 aa31.13■■■□□ 2.57
SCN1B-201ENST00000262631 NUP188Q5SRE5 1749 aa31.11■■■□□ 2.57
SCN1B-201ENST00000262631 TNNQ9UQP3 1299 aa31.11■■■□□ 2.57
SCN1B-201ENST00000262631 RTCBQ9Y3I0 505 aaKnown RBP31.11■■■□□ 2.57
SCN1B-201ENST00000262631 FKBP5Q13451 457 aaPredicted RBP31.1■■■□□ 2.57
SCN1B-201ENST00000262631 COL15A1P39059 1388 aa31.1■■■□□ 2.57
SCN1B-201ENST00000262631 RRP1P56182 461 aaKnown RBP31.09■■■□□ 2.57
SCN1B-201ENST00000262631 PHF14O94880 888 aa31.09■■■□□ 2.57
SCN1B-201ENST00000262631 HMGB2P26583 209 aaKnown RBP31.09■■■□□ 2.57
SCN1B-201ENST00000262631 CACNA1FO60840 1977 aa31.09■■■□□ 2.57
SCN1B-201ENST00000262631 RNF123Q5XPI4 1314 aa31.09■■■□□ 2.57
SCN1B-201ENST00000262631 TRIM27P14373 513 aa31.08■■■□□ 2.57
SCN1B-201ENST00000262631 TBC1D2BQ9UPU7 963 aa31.08■■■□□ 2.57
SCN1B-201ENST00000262631 PTPRCP08575 1304 aa31.08■■■□□ 2.57
SCN1B-201ENST00000262631 ARXQ96QS3 562 aa31.07■■■□□ 2.56
SCN1B-201ENST00000262631 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.06■■■□□ 2.56
SCN1B-201ENST00000262631 F6X3S4 739 aa31.06■■■□□ 2.56
SCN1B-201ENST00000262631 ZKSCAN2Q63HK3 967 aa31.06■■■□□ 2.56
SCN1B-201ENST00000262631 ATF7IPQ6VMQ6 1270 aa31.06■■■□□ 2.56
SCN1B-201ENST00000262631 TFCP2L1Q9NZI6 479 aa31.06■■■□□ 2.56
SCN1B-201ENST00000262631 ADCY9O60503 1353 aa31.06■■■□□ 2.56
SCN1B-201ENST00000262631 PI4KAP2A4QPH2 592 aa31.06■■■□□ 2.56
SCN1B-201ENST00000262631 UBR3Q6ZT12 1888 aa31.06■■■□□ 2.56
SCN1B-201ENST00000262631 NPM2Q86SE8 214 aaKnown RBP31.06■■■□□ 2.56
SCN1B-201ENST00000262631 DZIP3Q86Y13 1208 aaKnown RBP31.06■■■□□ 2.56
SCN1B-201ENST00000262631 PI4KAP1Q8N8J0 262 aa31.06■■■□□ 2.56
SCN1B-201ENST00000262631 ARHGAP45Q92619 1136 aa31.06■■■□□ 2.56
SCN1B-201ENST00000262631 IPO8O15397 1037 aaKnown RBP31.05■■■□□ 2.56
SCN1B-201ENST00000262631 ARHGEF1Q92888 912 aaKnown RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms