RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 DAAM2Q86T65 1068 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 WDR63Q8IWG1 891 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 RSRC1Q96IZ7 334 aaKnown RBP12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 HYPKQ9NX55 129 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 CCT4P50991 539 aaKnown RBP12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 KRT32Q14532 448 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 PLEKHO1Q53GL0 409 aaPredicted RBP12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 CCDC6Q16204 474 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 VPS18Q9P253 973 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 CEP131Q9UPN4 1083 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 PTPRGP23470 1445 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 POGZQ7Z3K3 1410 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 SLU7O95391 586 aaKnown RBP12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 FKBP15Q5T1M5 1219 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 PPP4R3AQ6IN85 833 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 CCDC121Q6ZUS5 278 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 NBPF11Q86T75 865 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 ALS2CR12Q96Q35 445 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 MPHOSPH8Q99549 860 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 GDPD2Q9HCC8 539 aa12.44□□□□□ -0.42
SLC6A4-201ENST00000261707 EBAG9O00559 213 aa12.43□□□□□ -0.42
SLC6A4-201ENST00000261707 KLHL10Q6JEL2 608 aa12.43□□□□□ -0.42
SLC6A4-201ENST00000261707 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
SLC6A4-201ENST00000261707 NAA25Q14CX7 972 aa12.43□□□□□ -0.42
SLC6A4-201ENST00000261707 FBF1Q8TES7 1133 aa12.43□□□□□ -0.42
SLC6A4-201ENST00000261707 GSTTP1A0A1W2PQM5 241 aa12.43□□□□□ -0.42
SLC6A4-201ENST00000261707 HS1BP3Q53T59 392 aa12.43□□□□□ -0.42
SLC6A4-201ENST00000261707 GGNBP2Q9H3C7 697 aa12.43□□□□□ -0.42
SLC6A4-201ENST00000261707 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.43□□□□□ -0.42
SLC6A4-201ENST00000261707 V9GYY5 206 aaPredicted RBP12.43□□□□□ -0.42
SLC6A4-201ENST00000261707 CCDC160A6NGH7 325 aa12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 ECM2O94769 699 aaPredicted RBP12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 SPG7Q9UQ90 795 aa12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 NACADO15069 1562 aa12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 NUP133Q8WUM0 1156 aa12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 HCLS1P14317 486 aaPredicted RBP12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 CRACR2BQ8N4Y2 399 aaPredicted RBP12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 NSRP1Q9H0G5 558 aaKnown RBP12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 TTC16Q8NEE8 873 aa12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 ZNF622Q969S3 477 aaKnown RBP eCLIP12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 ATRIPQ8WXE1 791 aa12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 CEP83Q9Y592 693 aa12.42□□□□□ -0.42
SLC6A4-201ENST00000261707 ZNF165P49910 485 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 SEPT6Q14141 434 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 CACNA2D4Q7Z3S7 1137 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 WASF1Q92558 559 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 SH2B1Q9NRF2 756 aaPredicted RBP12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 OPA1O60313 960 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 CCDC158Q5M9N0 1113 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 UBE2HP62256 183 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 DNAI1Q9UI46 699 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 CTAGE15A4D2H0 777 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 CTAGE8P0CG41 777 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 SKILP12757 684 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 CTAGE6Q86UF2 777 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 CTAGE4Q8IX94 777 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 RRAGDQ9NQL2 400 aaPredicted RBP12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 TAOK3Q9H2K8 898 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 JADE2Q9NQC1 790 aa12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 BMP2KQ9NSY1 1161 aaPredicted RBP12.41□□□□□ -0.42
SLC6A4-201ENST00000261707 KIF5BP33176 963 aa12.4□□□□□ -0.42
SLC6A4-201ENST00000261707 A0A1B0GUA9 196 aa12.4□□□□□ -0.42
SLC6A4-201ENST00000261707 CKAP4Q07065 602 aaKnown RBP12.4□□□□□ -0.42
SLC6A4-201ENST00000261707 C20orf194Q5TEA3 1177 aa12.4□□□□□ -0.42
SLC6A4-201ENST00000261707 ZNF652Q9Y2D9 606 aa12.4□□□□□ -0.42
SLC6A4-201ENST00000261707 PRKAR2BP31323 418 aa12.4□□□□□ -0.42
SLC6A4-201ENST00000261707 CCDC186Q7Z3E2 898 aa12.4□□□□□ -0.42
SLC6A4-201ENST00000261707 ANKS4BQ8N8V4 417 aa12.4□□□□□ -0.42
SLC6A4-201ENST00000261707 TBC1D32Q96NH3 1257 aa12.4□□□□□ -0.42
SLC6A4-201ENST00000261707 TOM1O60784 492 aa12.4□□□□□ -0.43
SLC6A4-201ENST00000261707 SLFN5Q08AF3 891 aa12.4□□□□□ -0.43
SLC6A4-201ENST00000261707 TNIP1Q15025 636 aa12.4□□□□□ -0.43
SLC6A4-201ENST00000261707 GOLGA1Q92805 767 aa12.4□□□□□ -0.43
SLC6A4-201ENST00000261707 SIL1Q9H173 461 aa12.4□□□□□ -0.43
SLC6A4-201ENST00000261707 FSIP1Q8NA03 581 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 CETN2P41208 172 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 SOGA3Q5TF21 947 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 AACSQ86V21 672 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 GIMAP6Q6P9H5 292 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 TMEM57Q8N5G2 664 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 CCDC114Q96M63 670 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 CFAP57Q96MR6 1250 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 TTC12Q9H892 705 aaPredicted RBP12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 CAVIN2O95810 425 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 SCAPERQ9BY12 1400 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 SSBP05455 408 aaKnown RBP eCLIP12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 GTF3C6Q969F1 213 aa12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 PAIP2Q9BPZ3 127 aaKnown RBP12.39□□□□□ -0.43
SLC6A4-201ENST00000261707 PRPF40BQ6NWY9 871 aaKnown RBP12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 ANKIB1Q9P2G1 1089 aa12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 TUBB4AP04350 444 aa12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 VPS36Q86VN1 386 aa12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 RPAP2Q8IXW5 612 aaPredicted RBP12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 RBM28Q9NW13 759 aaKnown RBP12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 RNF216Q9NWF9 866 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms