RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 IL16Q14005 1332 aa11.99□□□□□ -0.49
PALB2-201ENST00000261584 VGLL3A8MV65 326 aa11.98□□□□□ -0.49
PALB2-201ENST00000261584 RASEFQ8IZ41 740 aa11.98□□□□□ -0.49
PALB2-201ENST00000261584 CHPF2Q9P2E5 772 aa11.98□□□□□ -0.49
PALB2-201ENST00000261584 PYCARDQ9ULZ3 195 aa11.98□□□□□ -0.49
PALB2-201ENST00000261584 HTATSF1O43719 755 aaKnown RBP11.98□□□□□ -0.49
PALB2-201ENST00000261584 NBPF7P0C2Y1 421 aaPredicted RBP11.98□□□□□ -0.49
PALB2-201ENST00000261584 NRBP1Q9UHY1 535 aa11.98□□□□□ -0.49
PALB2-201ENST00000261584 FANCAO15360 1455 aa11.98□□□□□ -0.49
PALB2-201ENST00000261584 POLR3DP05423 398 aaPredicted RBP11.98□□□□□ -0.49
PALB2-201ENST00000261584 HAND2P61296 217 aa11.98□□□□□ -0.49
PALB2-201ENST00000261584 ARHGAP45Q92619 1136 aa11.98□□□□□ -0.49
PALB2-201ENST00000261584 ITSN2Q9NZM3 1697 aa11.98□□□□□ -0.49
PALB2-201ENST00000261584 SYNMO15061 1565 aa11.98□□□□□ -0.49
PALB2-201ENST00000261584 IL13P35225 146 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 HDGFP51858 240 aaKnown RBP11.97□□□□□ -0.49
PALB2-201ENST00000261584 PSME1Q06323 249 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 SNRKQ9NRH2 765 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 ATP5J2-PTCD1G3V325 749 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 PTCD1O75127 700 aaKnown RBP11.97□□□□□ -0.49
PALB2-201ENST00000261584 UBE2HP62256 183 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 HSP90AB3PQ58FF7 597 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 NLRP2Q9NX02 1062 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 MTMR7Q9Y216 660 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 F13A1P00488 732 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 FAM227BQ96M60 508 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 SLC52A1Q9NWF4 448 aa11.97□□□□□ -0.49
PALB2-201ENST00000261584 FKBP4Q02790 459 aaKnown RBP eCLIP11.96□□□□□ -0.49
PALB2-201ENST00000261584 NEXNQ0ZGT2 675 aa11.96□□□□□ -0.49
PALB2-201ENST00000261584 ACEP12821 1306 aa11.96□□□□□ -0.49
PALB2-201ENST00000261584 DDX46Q7L014 1031 aaKnown RBP11.96□□□□□ -0.49
PALB2-201ENST00000261584 MTERF4Q7Z6M4 381 aaKnown RBP11.96□□□□□ -0.49
PALB2-201ENST00000261584 MNS1Q8NEH6 495 aa11.96□□□□□ -0.49
PALB2-201ENST00000261584 KIF1BPQ96EK5 621 aa11.96□□□□□ -0.49
PALB2-201ENST00000261584 BTBD11A6QL63 1104 aa11.96□□□□□ -0.5
PALB2-201ENST00000261584 GNAT3A8MTJ3 354 aa11.96□□□□□ -0.5
PALB2-201ENST00000261584 CCDC129Q6ZRS4 1044 aa11.96□□□□□ -0.5
PALB2-201ENST00000261584 BCL2L12Q9HB09 334 aa11.96□□□□□ -0.5
PALB2-201ENST00000261584 PLCH2O75038 1416 aa11.96□□□□□ -0.5
PALB2-201ENST00000261584 CD109Q6YHK3 1445 aa11.96□□□□□ -0.5
PALB2-201ENST00000261584 LARGE1O95461 756 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 ZC3H6P61129 1189 aaKnown RBP11.95□□□□□ -0.5
PALB2-201ENST00000261584 PDE4CQ08493 712 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 DHX37Q8IY37 1157 aaKnown RBP11.95□□□□□ -0.5
PALB2-201ENST00000261584 CCDC144CPQ8IYA2 1237 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 SLC39A6Q13433 755 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 RBM8AQ9Y5S9 174 aaKnown RBP11.95□□□□□ -0.5
PALB2-201ENST00000261584 LIG1P18858 919 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 ADCK5Q3MIX3 580 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 USP16Q9Y5T5 823 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 EID1Q9Y6B2 187 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 NPC1L1Q9UHC9 1359 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 BRD1O95696 1058 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 STK38Q15208 465 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 OTUD7BQ6GQQ9 843 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 BRF1Q92994 677 aa11.95□□□□□ -0.5
PALB2-201ENST00000261584 ESCO1Q5FWF5 840 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 LRRC59Q96AG4 307 aaKnown RBP11.94□□□□□ -0.5
PALB2-201ENST00000261584 SNX14Q9Y5W7 946 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 PTH1RQ03431 593 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 TYRO3Q06418 890 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 CDC37L1Q7L3B6 337 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 MAP3K2Q9Y2U5 619 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 ATP10AO60312 1499 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 KCNQ3O43525 872 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 JAK2O60674 1132 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 PTPN14Q15678 1187 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 CHMP4AQ9BY43 222 aa11.94□□□□□ -0.5
PALB2-201ENST00000261584 RRP12Q5JTH9 1297 aaKnown RBP11.93□□□□□ -0.5
PALB2-201ENST00000261584 CCDC94Q9BW85 323 aaPredicted RBP11.93□□□□□ -0.5
PALB2-201ENST00000261584 SHANK2Q9UPX8 1470 aa11.93□□□□□ -0.5
PALB2-201ENST00000261584 PSMA5P28066 241 aa11.93□□□□□ -0.5
PALB2-201ENST00000261584 LARP1Q6PKG0 1096 aaKnown RBP11.93□□□□□ -0.5
PALB2-201ENST00000261584 SYNE3Q6ZMZ3 975 aa11.93□□□□□ -0.5
PALB2-201ENST00000261584 DNAAF4Q8WXU2 420 aa11.93□□□□□ -0.5
PALB2-201ENST00000261584 EYA1Q99502 592 aa11.93□□□□□ -0.5
PALB2-201ENST00000261584 IL25Q9H293 177 aa11.93□□□□□ -0.5
PALB2-201ENST00000261584 RPGRIP1LQ68CZ1 1315 aa11.93□□□□□ -0.5
PALB2-201ENST00000261584 GLRX3O76003 335 aaKnown RBP11.93□□□□□ -0.5
PALB2-201ENST00000261584 ATP8B2P98198 1209 aa11.93□□□□□ -0.5
PALB2-201ENST00000261584 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
PALB2-201ENST00000261584 SERPINC1P01008 464 aa11.92□□□□□ -0.5
PALB2-201ENST00000261584 TPM4P67936 248 aa11.92□□□□□ -0.5
PALB2-201ENST00000261584 ABCC4O15439 1325 aa11.92□□□□□ -0.5
PALB2-201ENST00000261584 GTF2F1P35269 517 aaKnown RBP eCLIP11.92□□□□□ -0.5
PALB2-201ENST00000261584 NMIQ13287 307 aaPredicted RBP11.92□□□□□ -0.5
PALB2-201ENST00000261584 NFXL1Q6ZNB6 911 aa11.92□□□□□ -0.5
PALB2-201ENST00000261584 GTF3C6Q969F1 213 aa11.92□□□□□ -0.5
PALB2-201ENST00000261584 FTOQ9C0B1 505 aaKnown RBP eCLIP11.92□□□□□ -0.5
PALB2-201ENST00000261584 NCOA5Q9HCD5 579 aaKnown RBP11.92□□□□□ -0.5
PALB2-201ENST00000261584 PDCP20941 246 aa11.92□□□□□ -0.5
PALB2-201ENST00000261584 ARID5BQ14865 1188 aa11.92□□□□□ -0.5
PALB2-201ENST00000261584 HSP90AB4PQ58FF6 505 aa11.92□□□□□ -0.5
PALB2-201ENST00000261584 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
PALB2-201ENST00000261584 SHROOM2Q13796 1616 aa11.92□□□□□ -0.5
PALB2-201ENST00000261584 URI1O94763 535 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms