RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 AKAP2Q9Y2D5 859 aa17.29■□□□□ 0.36
C12orf49-201ENST00000261318 TMC6Q7Z403 805 aa17.29■□□□□ 0.36
C12orf49-201ENST00000261318 FSIP1Q8NA03 581 aa17.29■□□□□ 0.36
C12orf49-201ENST00000261318 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
C12orf49-201ENST00000261318 GOLGA6L10A0A0M3HER8 536 aa17.29■□□□□ 0.36
C12orf49-201ENST00000261318 PAFAH1B1P43034 410 aa17.29■□□□□ 0.36
C12orf49-201ENST00000261318 MCM10Q7L590 875 aa17.29■□□□□ 0.36
C12orf49-201ENST00000261318 STRN4Q9NRL3 753 aa17.29■□□□□ 0.36
C12orf49-201ENST00000261318 SPDYE4A6NLX3 237 aa17.29■□□□□ 0.36
C12orf49-201ENST00000261318 USO1O60763 962 aaKnown RBP17.29■□□□□ 0.36
C12orf49-201ENST00000261318 IFFO1Q0D2I5 559 aa17.29■□□□□ 0.36
C12orf49-201ENST00000261318 FGFR1OPO95684 399 aaKnown RBP17.29■□□□□ 0.36
C12orf49-201ENST00000261318 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.36
C12orf49-201ENST00000261318 RBM27Q9P2N5 1060 aaKnown RBP17.29■□□□□ 0.36
C12orf49-201ENST00000261318 GJB2P29033 226 aa17.28■□□□□ 0.36
C12orf49-201ENST00000261318 GUCY1B3Q02153 619 aa17.28■□□□□ 0.36
C12orf49-201ENST00000261318 VPS36Q86VN1 386 aa17.28■□□□□ 0.36
C12orf49-201ENST00000261318 ZHX1Q9UKY1 873 aaPredicted RBP17.28■□□□□ 0.36
C12orf49-201ENST00000261318 CDK13Q14004 1512 aaKnown RBP17.28■□□□□ 0.36
C12orf49-201ENST00000261318 DESP17661 470 aa17.28■□□□□ 0.36
C12orf49-201ENST00000261318 TSG101Q99816 390 aa17.28■□□□□ 0.36
C12orf49-201ENST00000261318 PTPRCP08575 1304 aa17.28■□□□□ 0.36
C12orf49-201ENST00000261318 LRSAM1Q6UWE0 723 aa17.27■□□□□ 0.36
C12orf49-201ENST00000261318 EPRSP07814 1512 aaKnown RBP17.27■□□□□ 0.36
C12orf49-201ENST00000261318 YEATS4O95619 227 aa17.27■□□□□ 0.36
C12orf49-201ENST00000261318 ZNF165P49910 485 aa17.27■□□□□ 0.36
C12orf49-201ENST00000261318 BMS1Q14692 1282 aaKnown RBP17.27■□□□□ 0.36
C12orf49-201ENST00000261318 SSR1P43307 286 aaKnown RBP17.27■□□□□ 0.36
C12orf49-201ENST00000261318 CCDC178Q5BJE1 867 aa17.27■□□□□ 0.36
C12orf49-201ENST00000261318 CLCN1P35523 988 aa17.27■□□□□ 0.35
C12orf49-201ENST00000261318 CTR9Q6PD62 1173 aa17.27■□□□□ 0.35
C12orf49-201ENST00000261318 DDX54Q8TDD1 881 aaKnown RBP17.27■□□□□ 0.35
C12orf49-201ENST00000261318 CETN2P41208 172 aa17.27■□□□□ 0.35
C12orf49-201ENST00000261318 SEC63Q9UGP8 760 aaKnown RBP17.27■□□□□ 0.35
C12orf49-201ENST00000261318 KIF14Q15058 1648 aa17.26■□□□□ 0.35
C12orf49-201ENST00000261318 ZNF76P36508 570 aa17.26■□□□□ 0.35
C12orf49-201ENST00000261318 SMARCC1Q92922 1105 aaPredicted RBP17.26■□□□□ 0.35
C12orf49-201ENST00000261318 CUL7Q14999 1698 aa17.26■□□□□ 0.35
C12orf49-201ENST00000261318 TOM1L2Q6ZVM7 507 aa17.26■□□□□ 0.35
C12orf49-201ENST00000261318 CCDC150Q8NCX0 1101 aa17.26■□□□□ 0.35
C12orf49-201ENST00000261318 TMX1Q9H3N1 280 aa17.26■□□□□ 0.35
C12orf49-201ENST00000261318 RNF187Q5TA31 235 aaPredicted RBP17.26■□□□□ 0.35
C12orf49-201ENST00000261318 GOPCQ9HD26 462 aa17.26■□□□□ 0.35
C12orf49-201ENST00000261318 BCCIPQ9P287 314 aaKnown RBP eCLIP17.26■□□□□ 0.35
C12orf49-201ENST00000261318 GCOM1H8Y6P7 765 aaPredicted RBP17.25■□□□□ 0.35
C12orf49-201ENST00000261318 MYZAPP0CAP1 466 aa17.25■□□□□ 0.35
C12orf49-201ENST00000261318 POTEJP0CG39 1038 aa17.25■□□□□ 0.35
C12orf49-201ENST00000261318 METTL24Q5JXM2 366 aa17.25■□□□□ 0.35
C12orf49-201ENST00000261318 KRI1Q8N9T8 703 aaKnown RBP17.25■□□□□ 0.35
C12orf49-201ENST00000261318 CAMSAP2Q08AD1 1489 aa17.25■□□□□ 0.35
C12orf49-201ENST00000261318 LARP1Q6PKG0 1096 aaKnown RBP17.25■□□□□ 0.35
C12orf49-201ENST00000261318 NAPBQ9H115 298 aa17.25■□□□□ 0.35
C12orf49-201ENST00000261318 CCDC171Q6TFL3 1326 aa17.25■□□□□ 0.35
C12orf49-201ENST00000261318 TRERF1Q96PN7 1200 aa17.25■□□□□ 0.35
C12orf49-201ENST00000261318 NAA15Q9BXJ9 866 aaKnown RBP17.25■□□□□ 0.35
C12orf49-201ENST00000261318 ZNF287Q9HBT7 754 aa17.24■□□□□ 0.35
C12orf49-201ENST00000261318 USP5P45974 858 aa17.24■□□□□ 0.35
C12orf49-201ENST00000261318 UBE2Q2Q8WVN8 375 aa17.24■□□□□ 0.35
C12orf49-201ENST00000261318 EVI5LQ96CN4 794 aa17.24■□□□□ 0.35
C12orf49-201ENST00000261318 GOLGA8BA8MQT2 603 aa17.24■□□□□ 0.35
C12orf49-201ENST00000261318 IGHMBP2P38935 993 aaKnown RBP17.24■□□□□ 0.35
C12orf49-201ENST00000261318 SLC12A7Q9Y666 1083 aa17.24■□□□□ 0.35
C12orf49-201ENST00000261318 IFIT1P09914 478 aaKnown RBP17.24■□□□□ 0.35
C12orf49-201ENST00000261318 ALS2CR12Q96Q35 445 aa17.24■□□□□ 0.35
C12orf49-201ENST00000261318 LMAN1P49257 510 aa17.24■□□□□ 0.35
C12orf49-201ENST00000261318 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
C12orf49-201ENST00000261318 MATR3P43243 847 aaKnown RBP eCLIP17.23■□□□□ 0.35
C12orf49-201ENST00000261318 TIGD1Q96MW7 591 aa17.23■□□□□ 0.35
C12orf49-201ENST00000261318 ZNF213O14771 459 aa17.23■□□□□ 0.35
C12orf49-201ENST00000261318 CPLX3Q8WVH0 158 aa17.23■□□□□ 0.35
C12orf49-201ENST00000261318 TFIP11Q9UBB9 837 aaKnown RBP17.23■□□□□ 0.35
C12orf49-201ENST00000261318 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
C12orf49-201ENST00000261318 KRT222Q8N1A0 295 aa17.23■□□□□ 0.35
C12orf49-201ENST00000261318 LARP6Q9BRS8 491 aaKnown RBP17.23■□□□□ 0.35
C12orf49-201ENST00000261318 ABCF2Q9UG63 623 aa17.23■□□□□ 0.35
C12orf49-201ENST00000261318 IGHDP01880 384 aa17.23■□□□□ 0.35
C12orf49-201ENST00000261318 CCT2P78371 535 aaKnown RBP17.23■□□□□ 0.35
C12orf49-201ENST00000261318 BIN1O00499 593 aa17.23■□□□□ 0.35
C12orf49-201ENST00000261318 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
C12orf49-201ENST00000261318 TTC22Q5TAA0 569 aa17.22■□□□□ 0.35
C12orf49-201ENST00000261318 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
C12orf49-201ENST00000261318 MINDY4BA8MYZ0 360 aa17.22■□□□□ 0.35
C12orf49-201ENST00000261318 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
C12orf49-201ENST00000261318 CCDC61Q9Y6R9 512 aa17.22■□□□□ 0.35
C12orf49-201ENST00000261318 RAB34Q9BZG1 259 aa17.22■□□□□ 0.35
C12orf49-201ENST00000261318 ZMYND15Q9H091 742 aa17.22■□□□□ 0.35
C12orf49-201ENST00000261318 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.22■□□□□ 0.35
C12orf49-201ENST00000261318 F6X3S4 739 aa17.21■□□□□ 0.35
C12orf49-201ENST00000261318 CCDC175P0C221 793 aa17.21■□□□□ 0.35
C12orf49-201ENST00000261318 SMC1AQ14683 1233 aaKnown RBP17.21■□□□□ 0.35
C12orf49-201ENST00000261318 IQGAP2Q13576 1575 aa17.21■□□□□ 0.35
C12orf49-201ENST00000261318 GSTTP1A0A1W2PQM5 241 aa17.21■□□□□ 0.35
C12orf49-201ENST00000261318 DNA2P51530 1060 aa17.21■□□□□ 0.35
C12orf49-201ENST00000261318 SPECC1Q5M775 1068 aa17.21■□□□□ 0.35
C12orf49-201ENST00000261318 RBM5P52756 815 aaKnown RBP eCLIP17.21■□□□□ 0.35
C12orf49-201ENST00000261318 HLTFQ14527 1009 aaKnown RBP eCLIP17.21■□□□□ 0.35
C12orf49-201ENST00000261318 TDRD12Q587J7 1177 aaKnown RBP17.21■□□□□ 0.35
C12orf49-201ENST00000261318 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
C12orf49-201ENST00000261318 CTCFLQ8NI51 663 aaPredicted RBP17.21■□□□□ 0.34
C12orf49-201ENST00000261318 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms