RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
SLC3A1-201ENST00000260649 XRCC6P12956 609 aaKnown RBP eCLIP13.87□□□□□ -0.19
SLC3A1-201ENST00000260649 BABAM1Q9NWV8 329 aa13.87□□□□□ -0.19
SLC3A1-201ENST00000260649 PA2G4Q9UQ80 394 aaKnown RBP13.87□□□□□ -0.19
SLC3A1-201ENST00000260649 SALL3Q9BXA9 1300 aa13.86□□□□□ -0.19
SLC3A1-201ENST00000260649 CHMLP26374 656 aa13.86□□□□□ -0.19
SLC3A1-201ENST00000260649 RHPN1Q8TCX5 695 aa13.86□□□□□ -0.19
SLC3A1-201ENST00000260649 UPF3BQ9BZI7 483 aaKnown RBP13.86□□□□□ -0.19
SLC3A1-201ENST00000260649 MYL6BP14649 208 aa13.86□□□□□ -0.19
SLC3A1-201ENST00000260649 NCLP19338 710 aaKnown RBP13.86□□□□□ -0.19
SLC3A1-201ENST00000260649 SSH3Q8TE77 659 aa13.86□□□□□ -0.19
SLC3A1-201ENST00000260649 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
SLC3A1-201ENST00000260649 L1TD1Q5T7N2 865 aaKnown RBP13.86□□□□□ -0.19
SLC3A1-201ENST00000260649 MCTP1Q6DN14 999 aa13.86□□□□□ -0.19
SLC3A1-201ENST00000260649 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
SLC3A1-201ENST00000260649 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
SLC3A1-201ENST00000260649 DBF4Q9UBU7 674 aaPredicted RBP13.85□□□□□ -0.19
SLC3A1-201ENST00000260649 ADCY9O60503 1353 aa13.85□□□□□ -0.19
SLC3A1-201ENST00000260649 FOXD4L6Q3SYB3 417 aaPredicted RBP13.84□□□□□ -0.19
SLC3A1-201ENST00000260649 FOXD4L3Q6VB84 417 aaPredicted RBP13.84□□□□□ -0.19
SLC3A1-201ENST00000260649 RAPGEF4Q8WZA2 1011 aa13.84□□□□□ -0.19
SLC3A1-201ENST00000260649 BAG4O95429 457 aaKnown RBP13.83□□□□□ -0.19
SLC3A1-201ENST00000260649 ATF3P18847 181 aa13.83□□□□□ -0.19
SLC3A1-201ENST00000260649 LARP6Q9BRS8 491 aaKnown RBP13.83□□□□□ -0.19
SLC3A1-201ENST00000260649 EIF5BO60841 1220 aaKnown RBP13.83□□□□□ -0.2
SLC3A1-201ENST00000260649 NFATC2IPQ8NCF5 419 aa13.83□□□□□ -0.2
SLC3A1-201ENST00000260649 DTNBO60941 627 aa13.83□□□□□ -0.2
SLC3A1-201ENST00000260649 POLA2Q14181 598 aa13.82□□□□□ -0.2
SLC3A1-201ENST00000260649 SIL1Q9H173 461 aa13.82□□□□□ -0.2
SLC3A1-201ENST00000260649 C19orf44Q9H6X5 657 aa13.82□□□□□ -0.2
SLC3A1-201ENST00000260649 DDX49Q9Y6V7 483 aaKnown RBP13.82□□□□□ -0.2
SLC3A1-201ENST00000260649 CWC27Q6UX04 472 aaKnown RBP13.82□□□□□ -0.2
SLC3A1-201ENST00000260649 KIF1BPQ96EK5 621 aa13.82□□□□□ -0.2
SLC3A1-201ENST00000260649 GOLGA6L22H0YM25 854 aa13.81□□□□□ -0.2
SLC3A1-201ENST00000260649 MCCP23508 829 aa13.81□□□□□ -0.2
SLC3A1-201ENST00000260649 TPRNQ4KMQ1 711 aa13.81□□□□□ -0.2
SLC3A1-201ENST00000260649 GAS2L3Q86XJ1 694 aa13.81□□□□□ -0.2
SLC3A1-201ENST00000260649 STAP2Q9UGK3 403 aa13.81□□□□□ -0.2
SLC3A1-201ENST00000260649 ERBB3P21860 1342 aa13.81□□□□□ -0.2
SLC3A1-201ENST00000260649 HSPA2P54652 639 aa13.81□□□□□ -0.2
SLC3A1-201ENST00000260649 KLHDC4Q8TBB5 520 aa13.81□□□□□ -0.2
SLC3A1-201ENST00000260649 TMX3Q96JJ7 454 aa13.81□□□□□ -0.2
SLC3A1-201ENST00000260649 SPG7Q9UQ90 795 aa13.81□□□□□ -0.2
SLC3A1-201ENST00000260649 KSR2Q6VAB6 950 aa13.8□□□□□ -0.2
SLC3A1-201ENST00000260649 RIC3Q7Z5B4 369 aa13.8□□□□□ -0.2
SLC3A1-201ENST00000260649 FSD2A1L4K1 749 aa13.8□□□□□ -0.2
SLC3A1-201ENST00000260649 RAB11FIP3O75154 756 aa13.8□□□□□ -0.2
SLC3A1-201ENST00000260649 HOXB7P09629 217 aa13.8□□□□□ -0.2
SLC3A1-201ENST00000260649 PI4K2BQ8TCG2 481 aa13.8□□□□□ -0.2
SLC3A1-201ENST00000260649 C1orf167Q5SNV9 1468 aa13.8□□□□□ -0.2
SLC3A1-201ENST00000260649 DDX54Q8TDD1 881 aaKnown RBP13.79□□□□□ -0.2
SLC3A1-201ENST00000260649 SUCLG2Q96I99 432 aa13.79□□□□□ -0.2
SLC3A1-201ENST00000260649 GRPEL1Q9HAV7 217 aa13.79□□□□□ -0.2
SLC3A1-201ENST00000260649 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.79□□□□□ -0.2
SLC3A1-201ENST00000260649 TATP17735 454 aaPredicted RBP13.79□□□□□ -0.2
SLC3A1-201ENST00000260649 USP54Q70EL1 1684 aa13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 PRPF40AO75400 957 aaKnown RBP13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 NUCB2P80303 420 aa13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 ZNF790Q6PG37 636 aa13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 CCDC8Q9H0W5 538 aaPredicted RBP13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 PXDNLA1KZ92 1463 aa13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 CACNA1FO60840 1977 aa13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 RGPD5Q99666 1765 aa13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 CPA1P15085 419 aa13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 CLASRPQ8N2M8 674 aaKnown RBP13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 BICC1Q9H694 974 aaKnown RBP13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 ZDHHC9Q9Y397 364 aa13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 TMEM94Q12767 1356 aa13.78□□□□□ -0.2
SLC3A1-201ENST00000260649 AACSQ86V21 672 aa13.77□□□□□ -0.2
SLC3A1-201ENST00000260649 XAGE3Q8WTP9 111 aa13.77□□□□□ -0.2
SLC3A1-201ENST00000260649 ZNF496Q96IT1 587 aaPredicted RBP13.77□□□□□ -0.2
SLC3A1-201ENST00000260649 IFIT2P09913 472 aaKnown RBP13.77□□□□□ -0.21
SLC3A1-201ENST00000260649 COPS6Q7L5N1 327 aa13.77□□□□□ -0.21
SLC3A1-201ENST00000260649 CNTROBQ8N137 903 aa13.77□□□□□ -0.21
SLC3A1-201ENST00000260649 MYD88Q99836 296 aa13.77□□□□□ -0.21
SLC3A1-201ENST00000260649 USP16Q9Y5T5 823 aa13.77□□□□□ -0.21
SLC3A1-201ENST00000260649 CAVIN1Q6NZI2 390 aaKnown RBP13.77□□□□□ -0.21
SLC3A1-201ENST00000260649 HYPKQ9NX55 129 aa13.77□□□□□ -0.21
SLC3A1-201ENST00000260649 CCDC9Q9Y3X0 531 aaKnown RBP13.77□□□□□ -0.21
SLC3A1-201ENST00000260649 ZNF142P52746 1687 aaPredicted RBP13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 MED1Q15648 1581 aaPredicted RBP13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 GRM8O00222 908 aa13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 SKOR2Q2VWA4 1001 aaPredicted RBP13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 CHMP4AQ9BY43 222 aa13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 KDM3BQ7LBC6 1761 aa13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 NPHP3Q7Z494 1330 aa13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 DDX58O95786 925 aaKnown RBP13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 PHKG2P15735 406 aa13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 MRE11P49959 708 aa13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 PDIA6Q15084 440 aa13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 SLC52A2Q9HAB3 445 aa13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 RBM27Q9P2N5 1060 aaKnown RBP13.76□□□□□ -0.21
SLC3A1-201ENST00000260649 ADAMTSL3P82987 1691 aa13.75□□□□□ -0.21
SLC3A1-201ENST00000260649 DIAPH3Q9NSV4 1193 aa13.75□□□□□ -0.21
SLC3A1-201ENST00000260649 ATP5J2-PTCD1G3V325 749 aa13.75□□□□□ -0.21
SLC3A1-201ENST00000260649 PTCD1O75127 700 aaKnown RBP13.75□□□□□ -0.21
SLC3A1-201ENST00000260649 IGKV5-2P06315 115 aa13.75□□□□□ -0.21
SLC3A1-201ENST00000260649 HSP90AB4PQ58FF6 505 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms