RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 ZNF790Q6PG37 636 aa22.64■■□□□ 1.21
CGREF1-201ENST00000260595 TTC5Q8N0Z6 440 aa22.64■■□□□ 1.21
CGREF1-201ENST00000260595 ZNF496Q96IT1 587 aaPredicted RBP22.64■■□□□ 1.21
CGREF1-201ENST00000260595 NARFQ9UHQ1 456 aa22.64■■□□□ 1.21
CGREF1-201ENST00000260595 NUDCQ9Y266 331 aa22.64■■□□□ 1.21
CGREF1-201ENST00000260595 BCS1LQ9Y276 419 aa22.63■■□□□ 1.21
CGREF1-201ENST00000260595 N4BP2Q86UW6 1770 aaPredicted RBP22.63■■□□□ 1.21
CGREF1-201ENST00000260595 COL15A1P39059 1388 aa22.63■■□□□ 1.21
CGREF1-201ENST00000260595 BCL2L12Q9HB09 334 aa22.62■■□□□ 1.21
CGREF1-201ENST00000260595 U2AF1L5P0DN76 240 aaPredicted RBP22.61■■□□□ 1.21
CGREF1-201ENST00000260595 U2AF1Q01081 240 aaKnown RBP eCLIP22.61■■□□□ 1.21
CGREF1-201ENST00000260595 HEG1Q9ULI3 1381 aa22.61■■□□□ 1.21
CGREF1-201ENST00000260595 FCHSD2O94868 740 aa22.6■■□□□ 1.21
CGREF1-201ENST00000260595 STARD3NLO95772 234 aa22.6■■□□□ 1.21
CGREF1-201ENST00000260595 CANXP27824 592 aaKnown RBP22.6■■□□□ 1.21
CGREF1-201ENST00000260595 EIF5P55010 431 aaKnown RBP22.6■■□□□ 1.21
CGREF1-201ENST00000260595 SIPA1L3O60292 1781 aaPredicted RBP22.59■■□□□ 1.21
CGREF1-201ENST00000260595 NFIXQ14938 502 aa22.59■■□□□ 1.21
CGREF1-201ENST00000260595 KCNQ3O43525 872 aa22.58■■□□□ 1.21
CGREF1-201ENST00000260595 TEX13AQ9BXU3 409 aaPredicted RBP22.58■■□□□ 1.21
CGREF1-201ENST00000260595 GPBP1L1Q9HC44 474 aaPredicted RBP22.57■■□□□ 1.2
CGREF1-201ENST00000260595 PIM2Q9P1W9 311 aa22.57■■□□□ 1.2
CGREF1-201ENST00000260595 BTBD11A6QL63 1104 aa22.56■■□□□ 1.2
CGREF1-201ENST00000260595 FMNL2Q96PY5 1086 aa22.56■■□□□ 1.2
CGREF1-201ENST00000260595 BRCA1P38398 1863 aaKnown RBP22.56■■□□□ 1.2
CGREF1-201ENST00000260595 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
CGREF1-201ENST00000260595 CHRNA5P30532 468 aa22.55■■□□□ 1.2
CGREF1-201ENST00000260595 ARHGAP27Q6ZUM4 889 aa22.55■■□□□ 1.2
CGREF1-201ENST00000260595 ZNF526Q8TF50 670 aaPredicted RBP22.55■■□□□ 1.2
CGREF1-201ENST00000260595 MCM10Q7L590 875 aa22.54■■□□□ 1.2
CGREF1-201ENST00000260595 A0A087WZG4 1122 aa22.53■■□□□ 1.2
CGREF1-201ENST00000260595 SERPINB2P05120 415 aa22.53■■□□□ 1.2
CGREF1-201ENST00000260595 DALRD3Q5D0E6 543 aaKnown RBP22.53■■□□□ 1.2
CGREF1-201ENST00000260595 HTATSF1O43719 755 aaKnown RBP22.52■■□□□ 1.2
CGREF1-201ENST00000260595 A1BGP04217 495 aa22.52■■□□□ 1.2
CGREF1-201ENST00000260595 IL6STP40189 918 aaPredicted RBP22.52■■□□□ 1.2
CGREF1-201ENST00000260595 RTF1Q92541 710 aaKnown RBP22.52■■□□□ 1.2
CGREF1-201ENST00000260595 NRXN2Q9P2S2 1712 aa22.51■■□□□ 1.19
CGREF1-201ENST00000260595 DCTN1Q14203 1278 aa22.51■■□□□ 1.19
CGREF1-201ENST00000260595 USP16Q9Y5T5 823 aa22.51■■□□□ 1.19
CGREF1-201ENST00000260595 TBC1D2BQ9UPU7 963 aa22.5■■□□□ 1.19
CGREF1-201ENST00000260595 PRAMEF22A3QJZ6 481 aa22.49■■□□□ 1.19
CGREF1-201ENST00000260595 TBC1D9BQ66K14 1250 aa22.49■■□□□ 1.19
CGREF1-201ENST00000260595 AFDNP55196 1824 aaKnown RBP22.48■■□□□ 1.19
CGREF1-201ENST00000260595 KIF3CO14782 793 aa22.48■■□□□ 1.19
CGREF1-201ENST00000260595 BICDL1Q6ZP65 573 aa22.48■■□□□ 1.19
CGREF1-201ENST00000260595 PLEKHF1Q96S99 279 aa22.48■■□□□ 1.19
CGREF1-201ENST00000260595 ARFGEF1Q9Y6D6 1849 aa22.47■■□□□ 1.19
CGREF1-201ENST00000260595 ZNF330Q9Y3S2 320 aaPredicted RBP22.47■■□□□ 1.19
CGREF1-201ENST00000260595 CARMIL3Q8ND23 1372 aa22.47■■□□□ 1.19
CGREF1-201ENST00000260595 CAMTA2O94983 1202 aa22.46■■□□□ 1.19
CGREF1-201ENST00000260595 C9orf131Q5VYM1 1079 aa22.46■■□□□ 1.19
CGREF1-201ENST00000260595 SNRPA1P09661 255 aaKnown RBP22.45■■□□□ 1.18
CGREF1-201ENST00000260595 PIP4K2AP48426 406 aaPredicted RBP22.44■■□□□ 1.18
CGREF1-201ENST00000260595 SCN7AQ01118 1682 aa22.44■■□□□ 1.18
CGREF1-201ENST00000260595 TAF7Q15545 349 aaPredicted RBP22.44■■□□□ 1.18
CGREF1-201ENST00000260595 C2CD5Q86YS7 1000 aa22.43■■□□□ 1.18
CGREF1-201ENST00000260595 DZIP3Q86Y13 1208 aaKnown RBP22.42■■□□□ 1.18
CGREF1-201ENST00000260595 MIS18AQ9NYP9 233 aa22.42■■□□□ 1.18
CGREF1-201ENST00000260595 NBPF26B4DH59 902 aa22.41■■□□□ 1.18
CGREF1-201ENST00000260595 PRR5LQ6MZQ0 368 aa22.41■■□□□ 1.18
CGREF1-201ENST00000260595 NBPF10Q6P3W6 841 aaKnown RBP22.41■■□□□ 1.18
CGREF1-201ENST00000260595 NPM2Q86SE8 214 aaKnown RBP22.41■■□□□ 1.18
CGREF1-201ENST00000260595 NBPF15Q8N660 670 aa22.41■■□□□ 1.18
CGREF1-201ENST00000260595 TTLL6Q8N841 843 aa22.41■■□□□ 1.18
CGREF1-201ENST00000260595 H0YIN7 160 aa22.4■■□□□ 1.18
CGREF1-201ENST00000260595 NFE2L2Q16236 605 aa22.4■■□□□ 1.18
CGREF1-201ENST00000260595 BRIP1Q9BX63 1249 aa22.4■■□□□ 1.18
CGREF1-201ENST00000260595 NEFMP07197 916 aa22.39■■□□□ 1.17
CGREF1-201ENST00000260595 CCDC24Q8N4L8 307 aa22.39■■□□□ 1.17
CGREF1-201ENST00000260595 SETDB2Q96T68 719 aa22.39■■□□□ 1.17
CGREF1-201ENST00000260595 RNF181Q9P0P0 153 aa22.39■■□□□ 1.17
CGREF1-201ENST00000260595 DLEC1Q9Y238 1755 aa22.38■■□□□ 1.17
CGREF1-201ENST00000260595 RALBP1Q15311 655 aa22.38■■□□□ 1.17
CGREF1-201ENST00000260595 NMRK2Q9NPI5 230 aa22.38■■□□□ 1.17
CGREF1-201ENST00000260595 PDE6BP35913 854 aa22.37■■□□□ 1.17
CGREF1-201ENST00000260595 PRELPP51888 382 aa22.37■■□□□ 1.17
CGREF1-201ENST00000260595 RASSF7Q02833 373 aa22.37■■□□□ 1.17
CGREF1-201ENST00000260595 CLEC4GQ6UXB4 293 aa22.37■■□□□ 1.17
CGREF1-201ENST00000260595 PNISRQ8TF01 805 aaKnown RBP22.37■■□□□ 1.17
CGREF1-201ENST00000260595 THUMPD2Q9BTF0 503 aaKnown RBP22.37■■□□□ 1.17
CGREF1-201ENST00000260595 PDZRN3Q9UPQ7 1066 aa22.37■■□□□ 1.17
CGREF1-201ENST00000260595 HSPA6P17066 643 aa22.36■■□□□ 1.17
CGREF1-201ENST00000260595 PNNQ9H307 717 aaKnown RBP22.36■■□□□ 1.17
CGREF1-201ENST00000260595 ANKRD31Q8N7Z5 1873 aa22.36■■□□□ 1.17
CGREF1-201ENST00000260595 BCORQ6W2J9 1755 aa22.35■■□□□ 1.17
CGREF1-201ENST00000260595 CNBD1Q8NA66 436 aa22.35■■□□□ 1.17
CGREF1-201ENST00000260595 RGL2O15211 777 aa22.34■■□□□ 1.17
CGREF1-201ENST00000260595 EIF4A1P60842 406 aaKnown RBP22.34■■□□□ 1.17
CGREF1-201ENST00000260595 DDX10Q13206 875 aaKnown RBP22.34■■□□□ 1.17
CGREF1-201ENST00000260595 ZNF622Q969S3 477 aaKnown RBP eCLIP22.34■■□□□ 1.17
CGREF1-201ENST00000260595 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.17
CGREF1-201ENST00000260595 NFKBIEO00221 500 aa22.33■■□□□ 1.17
CGREF1-201ENST00000260595 TOMM70O94826 608 aa22.33■■□□□ 1.17
CGREF1-201ENST00000260595 MAPK8IP3Q9UPT6 1336 aa22.32■■□□□ 1.16
CGREF1-201ENST00000260595 SBF1O95248 1867 aa22.32■■□□□ 1.16
CGREF1-201ENST00000260595 LMNB1P20700 586 aa22.32■■□□□ 1.16
CGREF1-201ENST00000260595 ZNF652Q9Y2D9 606 aa22.32■■□□□ 1.16
CGREF1-201ENST00000260595 KDM3BQ7LBC6 1761 aa22.31■■□□□ 1.16
CGREF1-201ENST00000260595 SRGNP10124 158 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms