RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ISM2Q6H9L7 571 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 FAM83GA6ND36 823 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 BTBD11A6QL63 1104 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 ZNF165P49910 485 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 RAB11FIP3O75154 756 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 STIM1Q13586 685 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 CCAR1Q8IX12 1150 aaKnown RBP11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 SCAND2PQ9GZW5 306 aaPredicted RBP11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 LIMCH1Q9UPQ0 1083 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 TTC22Q5TAA0 569 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 NME9Q86XW9 330 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 CCDC141Q6ZP82 1450 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 NUP133Q8WUM0 1156 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 LUC7LQ9NQ29 371 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 NEMFO60524 1076 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 MCM6Q14566 821 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 MICALCLQ6ZW33 695 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 MICALL1Q8N3F8 863 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 ABCC11Q96J66 1382 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 ZHX3Q9H4I2 956 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 PLB1Q6P1J6 1458 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 GLRX3O76003 335 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 GJB2P29033 226 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 HDAC1Q13547 482 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 CNNM1Q9NRU3 951 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 KRT18P05783 430 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 GNG11P61952 73 aa11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 SEPT11Q9NVA2 429 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-201ENST00000260327 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.59
CTDSPL2-201ENST00000260327 STX6O43752 255 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 TMX3Q96JJ7 454 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 SYCP1Q15431 976 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 SPINK5Q9NQ38 1064 aaPredicted RBP11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 IQGAP2Q13576 1575 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 RAPGEF3O95398 923 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 NF2P35240 595 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 KRT32Q14532 448 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCDC12Q8WUD4 166 aaPredicted RBP11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 TAF4BQ92750 862 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCDC8Q9H0W5 538 aaPredicted RBP11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 PLEKHH1Q9ULM0 1364 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 PPFIA3O75145 1194 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 SDSP20132 328 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 C16orf71Q8IYS4 520 aaPredicted RBP11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 NUDT16Q96DE0 195 aaKnown RBP11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 GSDMDP57764 484 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 GTF3C6Q969F1 213 aa11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCDC85AQ96PX6 553 aaPredicted RBP11.33□□□□□ -0.6
CTDSPL2-201ENST00000260327 GBP2P32456 591 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 TRIM22Q8IYM9 498 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 MBIPQ9NS73 344 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCDC69A6NI79 296 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 SKILP12757 684 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 DNAI1Q9UI46 699 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 CNPY2Q9Y2B0 182 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 U2AF2P26368 475 aaKnown RBP eCLIP11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 TTC31Q49AM3 519 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 FSIP1Q8NA03 581 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 PARD3Q8TEW0 1356 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 CAPN2P17655 700 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 SLC52A1Q9NWF4 448 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 UBE2HP62256 183 aa11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 TAF7Q15545 349 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-201ENST00000260327 USP48Q86UV5 1035 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 DDX19AQ9NUU7 478 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 OGFRQ9NZT2 677 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 ABCA10Q8WWZ4 1543 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 RPGRIP1LQ68CZ1 1315 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCDC171Q6TFL3 1326 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 STX1AQ16623 288 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 PIBF1Q8WXW3 757 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 GOPCQ9HD26 462 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 IFFO1Q0D2I5 559 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 ANO6Q4KMQ2 910 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 SLC26A8Q96RN1 970 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 SH2B1Q9NRF2 756 aaPredicted RBP11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 SCAF11Q99590 1463 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 MATR3P43243 847 aaKnown RBP eCLIP11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 MCM3P25205 808 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 NUP88Q99567 741 aaPredicted RBP11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 ARFGAP3Q9NP61 516 aa11.31□□□□□ -0.6
CTDSPL2-201ENST00000260327 SPA17Q15506 151 aa11.3□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCT2P78371 535 aaKnown RBP11.3□□□□□ -0.6
CTDSPL2-201ENST00000260327 LUZP1Q86V48 1076 aa11.3□□□□□ -0.6
CTDSPL2-201ENST00000260327 PTGS1P23219 599 aa11.3□□□□□ -0.6
CTDSPL2-201ENST00000260327 ZNF397Q8NF99 534 aaPredicted RBP11.3□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCDC61Q9Y6R9 512 aa11.3□□□□□ -0.6
CTDSPL2-201ENST00000260327 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
CTDSPL2-201ENST00000260327 IVLP07476 585 aa11.3□□□□□ -0.6
CTDSPL2-201ENST00000260327 USHBP1Q8N6Y0 703 aa11.3□□□□□ -0.6
CTDSPL2-201ENST00000260327 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
CTDSPL2-201ENST00000260327 RAB3GAP1Q15042 981 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCDC178Q5BJE1 867 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 C17orf53Q8N3J3 647 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms