RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 STARD3NLO95772 234 aa20.31■□□□□ 0.84
CCDC90B-201ENST00000260054 ALDH1L2Q3SY69 923 aa20.31■□□□□ 0.84
CCDC90B-201ENST00000260054 SLC27A3Q5K4L6 730 aa20.31■□□□□ 0.84
CCDC90B-201ENST00000260054 LINC00116Q8NCU8 138 aa20.31■□□□□ 0.84
CCDC90B-201ENST00000260054 RGPD3A6NKT7 1758 aaPredicted RBP20.31■□□□□ 0.84
CCDC90B-201ENST00000260054 RGPD4Q7Z3J3 1758 aa20.31■□□□□ 0.84
CCDC90B-201ENST00000260054 BCAR3O75815 825 aa20.3■□□□□ 0.84
CCDC90B-201ENST00000260054 EN1Q05925 392 aaPredicted RBP20.3■□□□□ 0.84
CCDC90B-201ENST00000260054 CHPF2Q9P2E5 772 aa20.3■□□□□ 0.84
CCDC90B-201ENST00000260054 COL5A3P25940 1745 aaPredicted RBP20.3■□□□□ 0.84
CCDC90B-201ENST00000260054 A1BGP04217 495 aa20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 PIP4K2AP48426 406 aaPredicted RBP20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 PDIA6Q15084 440 aa20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 DEFB132Q7Z7B7 95 aa20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 CCDC125Q86Z20 511 aa20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 CAMKK2Q96RR4 588 aa20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 SMC4Q9NTJ3 1288 aa20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 ANXA1P04083 346 aa20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 BAG6P46379 1132 aa20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 PROSER3Q2NL68 480 aa20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 CHMP4AQ9BY43 222 aa20.29■□□□□ 0.84
CCDC90B-201ENST00000260054 NBPF26B4DH59 902 aa20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 CRKLP46109 303 aaKnown RBP20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 EZH2Q15910 746 aaKnown RBP20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 NBPF14Q5TI25 921 aa20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 NBPF10Q6P3W6 841 aaKnown RBP20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 MRPL50Q8N5N7 158 aaKnown RBP20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 NBPF15Q8N660 670 aa20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 UPF1Q92900 1129 aaKnown RBP eCLIP20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 STK31Q9BXU1 1019 aa20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 DBF4Q9UBU7 674 aaPredicted RBP20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 TAF1LQ8IZX4 1826 aa20.28■□□□□ 0.84
CCDC90B-201ENST00000260054 SLC4A2P04920 1241 aa20.27■□□□□ 0.84
CCDC90B-201ENST00000260054 INTS5Q6P9B9 1019 aaKnown RBP20.27■□□□□ 0.84
CCDC90B-201ENST00000260054 DDX21Q9NR30 783 aaKnown RBP eCLIP20.27■□□□□ 0.84
CCDC90B-201ENST00000260054 ZBTB1Q9Y2K1 713 aa20.27■□□□□ 0.84
CCDC90B-201ENST00000260054 ERBB4Q15303 1308 aa20.27■□□□□ 0.84
CCDC90B-201ENST00000260054 LRP10Q7Z4F1 713 aa20.26■□□□□ 0.83
CCDC90B-201ENST00000260054 MYH14Q7Z406 1995 aaKnown RBP20.26■□□□□ 0.83
CCDC90B-201ENST00000260054 MYL6BP14649 208 aa20.26■□□□□ 0.83
CCDC90B-201ENST00000260054 CCDC87Q9NVE4 849 aa20.26■□□□□ 0.83
CCDC90B-201ENST00000260054 CNTNAP4Q9C0A0 1308 aa20.25■□□□□ 0.83
CCDC90B-201ENST00000260054 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
CCDC90B-201ENST00000260054 RREB1Q92766 1687 aa20.24■□□□□ 0.83
CCDC90B-201ENST00000260054 C4BP0C0L5 1744 aa20.24■□□□□ 0.83
CCDC90B-201ENST00000260054 CANXP27824 592 aaKnown RBP20.24■□□□□ 0.83
CCDC90B-201ENST00000260054 G2E3Q7L622 706 aa20.24■□□□□ 0.83
CCDC90B-201ENST00000260054 PHAXQ9H814 394 aaKnown RBP20.24■□□□□ 0.83
CCDC90B-201ENST00000260054 RC3H1Q5TC82 1133 aaKnown RBP20.22■□□□□ 0.83
CCDC90B-201ENST00000260054 HYPKQ9NX55 129 aa20.22■□□□□ 0.83
CCDC90B-201ENST00000260054 CACNA1FO60840 1977 aa20.21■□□□□ 0.83
CCDC90B-201ENST00000260054 IL6STP40189 918 aaPredicted RBP20.21■□□□□ 0.83
CCDC90B-201ENST00000260054 FLIIQ13045 1269 aa20.21■□□□□ 0.83
CCDC90B-201ENST00000260054 NOB1Q9ULX3 412 aaKnown RBP20.21■□□□□ 0.83
CCDC90B-201ENST00000260054 SUPT16HQ9Y5B9 1047 aaKnown RBP20.21■□□□□ 0.83
CCDC90B-201ENST00000260054 KIF16BQ96L93 1317 aa20.21■□□□□ 0.83
CCDC90B-201ENST00000260054 AMIGO3Q86WK7 504 aa20.2■□□□□ 0.82
CCDC90B-201ENST00000260054 FRAT1Q92837 279 aaPredicted RBP20.2■□□□□ 0.82
CCDC90B-201ENST00000260054 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
CCDC90B-201ENST00000260054 GNPATO15228 680 aa20.19■□□□□ 0.82
CCDC90B-201ENST00000260054 EIF5P55010 431 aaKnown RBP20.19■□□□□ 0.82
CCDC90B-201ENST00000260054 COPS6Q7L5N1 327 aa20.19■□□□□ 0.82
CCDC90B-201ENST00000260054 XAGE3Q8WTP9 111 aa20.19■□□□□ 0.82
CCDC90B-201ENST00000260054 AK7Q96M32 723 aa20.19■□□□□ 0.82
CCDC90B-201ENST00000260054 PLIN1O60240 522 aa20.19■□□□□ 0.82
CCDC90B-201ENST00000260054 AIMP1Q12904 312 aaKnown RBP20.19■□□□□ 0.82
CCDC90B-201ENST00000260054 ZNF827Q17R98 1081 aa20.19■□□□□ 0.82
CCDC90B-201ENST00000260054 SMIM5Q71RC9 77 aa20.19■□□□□ 0.82
CCDC90B-201ENST00000260054 RPS6KA4O75676 772 aa20.18■□□□□ 0.82
CCDC90B-201ENST00000260054 HMGB2P26583 209 aaKnown RBP20.18■□□□□ 0.82
CCDC90B-201ENST00000260054 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
CCDC90B-201ENST00000260054 NUP188Q5SRE5 1749 aa20.18■□□□□ 0.82
CCDC90B-201ENST00000260054 RNF123Q5XPI4 1314 aa20.17■□□□□ 0.82
CCDC90B-201ENST00000260054 RRP1P56182 461 aaKnown RBP20.17■□□□□ 0.82
CCDC90B-201ENST00000260054 TTLL7Q6ZT98 887 aa20.17■□□□□ 0.82
CCDC90B-201ENST00000260054 COL15A1P39059 1388 aa20.17■□□□□ 0.82
CCDC90B-201ENST00000260054 PTPRCP08575 1304 aa20.16■□□□□ 0.82
CCDC90B-201ENST00000260054 FKBP5Q13451 457 aaPredicted RBP20.16■□□□□ 0.82
CCDC90B-201ENST00000260054 ANO8Q9HCE9 1232 aaPredicted RBP20.16■□□□□ 0.82
CCDC90B-201ENST00000260054 TNNQ9UQP3 1299 aa20.16■□□□□ 0.82
CCDC90B-201ENST00000260054 RTCBQ9Y3I0 505 aaKnown RBP20.16■□□□□ 0.82
CCDC90B-201ENST00000260054 ZKSCAN2Q63HK3 967 aa20.16■□□□□ 0.82
CCDC90B-201ENST00000260054 UBR3Q6ZT12 1888 aa20.15■□□□□ 0.82
CCDC90B-201ENST00000260054 TRIM27P14373 513 aa20.15■□□□□ 0.82
CCDC90B-201ENST00000260054 ATF7IPQ6VMQ6 1270 aa20.15■□□□□ 0.82
CCDC90B-201ENST00000260054 ARHGAP45Q92619 1136 aa20.15■□□□□ 0.82
CCDC90B-201ENST00000260054 IPO8O15397 1037 aaKnown RBP20.14■□□□□ 0.81
CCDC90B-201ENST00000260054 PHF14O94880 888 aa20.14■□□□□ 0.81
CCDC90B-201ENST00000260054 TBC1D2BQ9UPU7 963 aa20.14■□□□□ 0.81
CCDC90B-201ENST00000260054 ADCY9O60503 1353 aa20.14■□□□□ 0.81
CCDC90B-201ENST00000260054 PI4KAP2A4QPH2 592 aa20.13■□□□□ 0.81
CCDC90B-201ENST00000260054 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
CCDC90B-201ENST00000260054 DZIP3Q86Y13 1208 aaKnown RBP20.13■□□□□ 0.81
CCDC90B-201ENST00000260054 PI4KAP1Q8N8J0 262 aa20.13■□□□□ 0.81
CCDC90B-201ENST00000260054 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.13■□□□□ 0.81
CCDC90B-201ENST00000260054 F6X3S4 739 aa20.13■□□□□ 0.81
CCDC90B-201ENST00000260054 ANKRD13DQ6ZTN6 518 aa20.13■□□□□ 0.81
CCDC90B-201ENST00000260054 CLUAP1Q96AJ1 413 aa20.13■□□□□ 0.81
CCDC90B-201ENST00000260054 ARXQ96QS3 562 aa20.13■□□□□ 0.81
CCDC90B-201ENST00000260054 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms