RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 USP16Q9Y5T5 823 aa29.51■■■□□ 2.31
APOE-201ENST00000252486 CRKLP46109 303 aaKnown RBP29.5■■■□□ 2.31
APOE-201ENST00000252486 DUSP27Q5VZP5 1158 aa29.5■■■□□ 2.31
APOE-201ENST00000252486 CCDC87Q9NVE4 849 aa29.5■■■□□ 2.31
APOE-201ENST00000252486 SLC15A2Q16348 729 aa29.49■■■□□ 2.31
APOE-201ENST00000252486 TRMT2AQ8IZ69 625 aaKnown RBP29.49■■■□□ 2.31
APOE-201ENST00000252486 PRAMEF22A3QJZ6 481 aa29.48■■■□□ 2.31
APOE-201ENST00000252486 KRT24Q2M2I5 525 aa29.48■■■□□ 2.31
APOE-201ENST00000252486 CDCA7LQ96GN5 454 aa29.48■■■□□ 2.31
APOE-201ENST00000252486 ANO8Q9HCE9 1232 aaPredicted RBP29.48■■■□□ 2.31
APOE-201ENST00000252486 ERBB4Q15303 1308 aa29.47■■■□□ 2.31
APOE-201ENST00000252486 C8orf58Q8NAV2 365 aa29.47■■■□□ 2.31
APOE-201ENST00000252486 ZNF827Q17R98 1081 aa29.46■■■□□ 2.31
APOE-201ENST00000252486 INTS5Q6P9B9 1019 aaKnown RBP29.46■■■□□ 2.31
APOE-201ENST00000252486 TFCP2L1Q9NZI6 479 aa29.46■■■□□ 2.31
APOE-201ENST00000252486 GNPATO15228 680 aa29.45■■■□□ 2.31
APOE-201ENST00000252486 RPS6KA4O75676 772 aa29.45■■■□□ 2.31
APOE-201ENST00000252486 EXOSC9Q06265 439 aaKnown RBP29.45■■■□□ 2.31
APOE-201ENST00000252486 TWISTNBQ3B726 338 aaPredicted RBP29.45■■■□□ 2.31
APOE-201ENST00000252486 FLAD1Q8NFF5 587 aa29.45■■■□□ 2.31
APOE-201ENST00000252486 RTCBQ9Y3I0 505 aaKnown RBP29.45■■■□□ 2.31
APOE-201ENST00000252486 QSER1Q2KHR3 1735 aa29.44■■■□□ 2.3
APOE-201ENST00000252486 MYH14Q7Z406 1995 aaKnown RBP29.43■■■□□ 2.3
APOE-201ENST00000252486 ELL2O00472 640 aaPredicted RBP29.43■■■□□ 2.3
APOE-201ENST00000252486 ADRA2BP18089 450 aa29.43■■■□□ 2.3
APOE-201ENST00000252486 EIF2S2P20042 333 aaKnown RBP29.43■■■□□ 2.3
APOE-201ENST00000252486 SSFA2P28290 1259 aa29.43■■■□□ 2.3
APOE-201ENST00000252486 HDGFL1Q5TGJ6 251 aa29.43■■■□□ 2.3
APOE-201ENST00000252486 A1BGP04217 495 aa29.42■■■□□ 2.3
APOE-201ENST00000252486 ZBTB1Q9Y2K1 713 aa29.42■■■□□ 2.3
APOE-201ENST00000252486 UBR3Q6ZT12 1888 aa29.42■■■□□ 2.3
APOE-201ENST00000252486 TSPYL6Q8N831 410 aa29.41■■■□□ 2.3
APOE-201ENST00000252486 CANXP27824 592 aaKnown RBP29.4■■■□□ 2.3
APOE-201ENST00000252486 IL6STP40189 918 aaPredicted RBP29.4■■■□□ 2.3
APOE-201ENST00000252486 CCDC30Q5VVM6 783 aa29.4■■■□□ 2.3
APOE-201ENST00000252486 NPM2Q86SE8 214 aaKnown RBP29.4■■■□□ 2.3
APOE-201ENST00000252486 YTHDC1Q96MU7 727 aaKnown RBP29.4■■■□□ 2.3
APOE-201ENST00000252486 TUBGCP6Q96RT7 1819 aa29.38■■■□□ 2.29
APOE-201ENST00000252486 A0A087WZG4 1122 aa29.37■■■□□ 2.29
APOE-201ENST00000252486 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.37■■■□□ 2.29
APOE-201ENST00000252486 VAMP4O75379 141 aa29.37■■■□□ 2.29
APOE-201ENST00000252486 CT47B1P0C2W7 299 aaPredicted RBP29.37■■■□□ 2.29
APOE-201ENST00000252486 EIF5P55010 431 aaKnown RBP29.37■■■□□ 2.29
APOE-201ENST00000252486 R3HDM1Q15032 1099 aaKnown RBP29.37■■■□□ 2.29
APOE-201ENST00000252486 TRAPPC3LQ5T215 181 aa29.37■■■□□ 2.29
APOE-201ENST00000252486 DDX21Q9NR30 783 aaKnown RBP eCLIP29.37■■■□□ 2.29
APOE-201ENST00000252486 DBF4Q9UBU7 674 aaPredicted RBP29.37■■■□□ 2.29
APOE-201ENST00000252486 ZNF428Q96B54 188 aa29.36■■■□□ 2.29
APOE-201ENST00000252486 NBPF26B4DH59 902 aa29.35■■■□□ 2.29
APOE-201ENST00000252486 NBPF10Q6P3W6 841 aaKnown RBP29.35■■■□□ 2.29
APOE-201ENST00000252486 NBPF15Q8N660 670 aa29.35■■■□□ 2.29
APOE-201ENST00000252486 NECTIN2Q92692 538 aa29.35■■■□□ 2.29
APOE-201ENST00000252486 PNPLA7Q6ZV29 1317 aa29.35■■■□□ 2.29
APOE-201ENST00000252486 PHF14O94880 888 aa29.34■■■□□ 2.29
APOE-201ENST00000252486 STK31Q9BXU1 1019 aa29.34■■■□□ 2.29
APOE-201ENST00000252486 COL15A1P39059 1388 aa29.34■■■□□ 2.29
APOE-201ENST00000252486 RFC4P35249 363 aa29.32■■■□□ 2.28
APOE-201ENST00000252486 PDIA6Q15084 440 aa29.32■■■□□ 2.28
APOE-201ENST00000252486 ARHGEF1Q92888 912 aaKnown RBP29.32■■■□□ 2.28
APOE-201ENST00000252486 HYPKQ9NX55 129 aa29.32■■■□□ 2.28
APOE-201ENST00000252486 CHPF2Q9P2E5 772 aa29.32■■■□□ 2.28
APOE-201ENST00000252486 MYL6BP14649 208 aa29.31■■■□□ 2.28
APOE-201ENST00000252486 AMIGO3Q86WK7 504 aa29.31■■■□□ 2.28
APOE-201ENST00000252486 COL23A1Q86Y22 540 aaPredicted RBP29.31■■■□□ 2.28
APOE-201ENST00000252486 ZNF330Q9Y3S2 320 aaPredicted RBP29.31■■■□□ 2.28
APOE-201ENST00000252486 MSH5O43196 834 aa29.3■■■□□ 2.28
APOE-201ENST00000252486 PIP4K2AP48426 406 aaPredicted RBP29.3■■■□□ 2.28
APOE-201ENST00000252486 SLC16A10Q8TF71 515 aa29.3■■■□□ 2.28
APOE-201ENST00000252486 PSDA5PKW4 1024 aaPredicted RBP29.29■■■□□ 2.28
APOE-201ENST00000252486 ZPR1O75312 459 aa29.27■■■□□ 2.28
APOE-201ENST00000252486 PROSER3Q2NL68 480 aa29.27■■■□□ 2.28
APOE-201ENST00000252486 LRP10Q7Z4F1 713 aa29.27■■■□□ 2.28
APOE-201ENST00000252486 CASZ1Q86V15 1759 aa29.26■■■□□ 2.28
APOE-201ENST00000252486 CACNA1FO60840 1977 aa29.26■■■□□ 2.28
APOE-201ENST00000252486 C4AP0C0L4 1744 aa29.26■■■□□ 2.27
APOE-201ENST00000252486 SMIM5Q71RC9 77 aa29.26■■■□□ 2.27
APOE-201ENST00000252486 DZIP3Q86Y13 1208 aaKnown RBP29.26■■■□□ 2.27
APOE-201ENST00000252486 NARFQ9UHQ1 456 aa29.26■■■□□ 2.27
APOE-201ENST00000252486 USP42Q9H9J4 1324 aaKnown RBP29.25■■■□□ 2.27
APOE-201ENST00000252486 RGL2O15211 777 aa29.25■■■□□ 2.27
APOE-201ENST00000252486 ALDH1L2Q3SY69 923 aa29.25■■■□□ 2.27
APOE-201ENST00000252486 ANXA1P04083 346 aa29.24■■■□□ 2.27
APOE-201ENST00000252486 KIF6Q6ZMV9 814 aa29.24■■■□□ 2.27
APOE-201ENST00000252486 ARXQ96QS3 562 aa29.24■■■□□ 2.27
APOE-201ENST00000252486 SLC4A2P04920 1241 aa29.23■■■□□ 2.27
APOE-201ENST00000252486 COPS6Q7L5N1 327 aa29.22■■■□□ 2.27
APOE-201ENST00000252486 XAGE3Q8WTP9 111 aa29.22■■■□□ 2.27
APOE-201ENST00000252486 TBC1D2BQ9UPU7 963 aa29.22■■■□□ 2.27
APOE-201ENST00000252486 ERVV-1B6SEH8 477 aa29.21■■■□□ 2.27
APOE-201ENST00000252486 TCERG1O14776 1098 aaKnown RBP29.21■■■□□ 2.27
APOE-201ENST00000252486 MAP3K15Q6ZN16 1313 aa29.2■■■□□ 2.27
APOE-201ENST00000252486 CAMTA2O94983 1202 aa29.2■■■□□ 2.26
APOE-201ENST00000252486 USPL1Q5W0Q7 1092 aa29.2■■■□□ 2.26
APOE-201ENST00000252486 PDGFDQ9GZP0 370 aaPredicted RBP29.2■■■□□ 2.26
APOE-201ENST00000252486 MTFR1LQ9H019 292 aa29.2■■■□□ 2.26
APOE-201ENST00000252486 SRP68Q9UHB9 627 aaKnown RBP29.2■■■□□ 2.26
APOE-201ENST00000252486 ZNF652Q9Y2D9 606 aa29.2■■■□□ 2.26
APOE-201ENST00000252486 SCN7AQ01118 1682 aa29.19■■■□□ 2.26
APOE-201ENST00000252486 DDX58O95786 925 aaKnown RBP29.19■■■□□ 2.26
APOE-201ENST00000252486 AIMP1Q12904 312 aaKnown RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms