RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 SBNO2Q9Y2G9 1366 aa13.76□□□□□ -0.21
SOX9-201ENST00000245479 PLXNC1O60486 1568 aa13.76□□□□□ -0.21
SOX9-201ENST00000245479 CCDC112Q8NEF3 446 aa13.76□□□□□ -0.21
SOX9-201ENST00000245479 HOXC9P31274 260 aa13.75□□□□□ -0.21
SOX9-201ENST00000245479 SPHKAPQ2M3C7 1700 aa13.75□□□□□ -0.21
SOX9-201ENST00000245479 PROSER3Q2NL68 480 aa13.75□□□□□ -0.21
SOX9-201ENST00000245479 LRSAM1Q6UWE0 723 aa13.75□□□□□ -0.21
SOX9-201ENST00000245479 RBSNQ9H1K0 784 aa13.75□□□□□ -0.21
SOX9-201ENST00000245479 EFCAB6Q5THR3 1501 aa13.75□□□□□ -0.21
SOX9-201ENST00000245479 MCM2P49736 904 aa13.75□□□□□ -0.21
SOX9-201ENST00000245479 PRIMPOLQ96LW4 560 aa13.75□□□□□ -0.21
SOX9-201ENST00000245479 MYD88Q99836 296 aa13.75□□□□□ -0.21
SOX9-201ENST00000245479 HSPA2P54652 639 aa13.74□□□□□ -0.21
SOX9-201ENST00000245479 TEX35Q5T0J7 233 aa13.74□□□□□ -0.21
SOX9-201ENST00000245479 BICD2Q8TD16 824 aa13.74□□□□□ -0.21
SOX9-201ENST00000245479 DNAAF4Q8WXU2 420 aa13.74□□□□□ -0.21
SOX9-201ENST00000245479 TFIP11Q9UBB9 837 aaKnown RBP13.74□□□□□ -0.21
SOX9-201ENST00000245479 LETM1O95202 739 aaPredicted RBP13.74□□□□□ -0.21
SOX9-201ENST00000245479 NEXNQ0ZGT2 675 aa13.74□□□□□ -0.21
SOX9-201ENST00000245479 TAF7LQ5H9L4 462 aa13.74□□□□□ -0.21
SOX9-201ENST00000245479 TULP4Q9NRJ4 1543 aa13.74□□□□□ -0.21
SOX9-201ENST00000245479 TAF3Q5VWG9 929 aa13.74□□□□□ -0.21
SOX9-201ENST00000245479 NFATC2IPQ8NCF5 419 aa13.74□□□□□ -0.21
SOX9-201ENST00000245479 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
SOX9-201ENST00000245479 TTC12Q9H892 705 aaPredicted RBP13.73□□□□□ -0.21
SOX9-201ENST00000245479 SNRKQ9NRH2 765 aa13.73□□□□□ -0.21
SOX9-201ENST00000245479 TERF1P54274 439 aa13.73□□□□□ -0.21
SOX9-201ENST00000245479 NOLC1Q14978 699 aaKnown RBP eCLIP13.73□□□□□ -0.21
SOX9-201ENST00000245479 PLEKHO1Q53GL0 409 aaPredicted RBP13.73□□□□□ -0.21
SOX9-201ENST00000245479 RHPN1Q8TCX5 695 aa13.73□□□□□ -0.21
SOX9-201ENST00000245479 TOMM22Q9NS69 142 aa13.73□□□□□ -0.21
SOX9-201ENST00000245479 PPRC1Q5VV67 1664 aaKnown RBP13.73□□□□□ -0.21
SOX9-201ENST00000245479 KIF1BO60333 1816 aa13.73□□□□□ -0.21
SOX9-201ENST00000245479 ABCC3O15438 1527 aa13.73□□□□□ -0.21
SOX9-201ENST00000245479 GUCY1B3Q02153 619 aa13.73□□□□□ -0.21
SOX9-201ENST00000245479 GNL2Q13823 731 aaKnown RBP13.73□□□□□ -0.21
SOX9-201ENST00000245479 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
SOX9-201ENST00000245479 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
SOX9-201ENST00000245479 HOMER1Q86YM7 354 aa13.72□□□□□ -0.21
SOX9-201ENST00000245479 CCAR2Q8N163 923 aaKnown RBP13.72□□□□□ -0.21
SOX9-201ENST00000245479 ZBTB3Q9H5J0 574 aa13.72□□□□□ -0.21
SOX9-201ENST00000245479 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
SOX9-201ENST00000245479 CNTROBQ8N137 903 aa13.72□□□□□ -0.21
SOX9-201ENST00000245479 MYOM2P54296 1465 aa13.72□□□□□ -0.21
SOX9-201ENST00000245479 ADCY5O95622 1261 aa13.71□□□□□ -0.21
SOX9-201ENST00000245479 UBE3BQ7Z3V4 1068 aa13.71□□□□□ -0.21
SOX9-201ENST00000245479 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
SOX9-201ENST00000245479 TRERF1Q96PN7 1200 aa13.71□□□□□ -0.21
SOX9-201ENST00000245479 USP44Q9H0E7 712 aa13.71□□□□□ -0.21
SOX9-201ENST00000245479 NSFL1CQ9UNZ2 370 aaKnown RBP13.71□□□□□ -0.21
SOX9-201ENST00000245479 POLR1AO95602 1720 aaPredicted RBP13.71□□□□□ -0.21
SOX9-201ENST00000245479 EVA1CP58658 441 aa13.71□□□□□ -0.21
SOX9-201ENST00000245479 TET3O43151 1660 aa13.71□□□□□ -0.21
SOX9-201ENST00000245479 ATF3P18847 181 aa13.71□□□□□ -0.21
SOX9-201ENST00000245479 RBM25P49756 843 aaKnown RBP13.71□□□□□ -0.21
SOX9-201ENST00000245479 CHST3Q7LGC8 479 aa13.71□□□□□ -0.21
SOX9-201ENST00000245479 GPATCH3Q96I76 525 aa13.71□□□□□ -0.21
SOX9-201ENST00000245479 ABCC4O15439 1325 aa13.71□□□□□ -0.22
SOX9-201ENST00000245479 ZKSCAN1P17029 563 aaPredicted RBP13.71□□□□□ -0.22
SOX9-201ENST00000245479 TSC1Q92574 1164 aa13.71□□□□□ -0.22
SOX9-201ENST00000245479 ESYT1Q9BSJ8 1104 aa13.71□□□□□ -0.22
SOX9-201ENST00000245479 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
SOX9-201ENST00000245479 CCDC192P0DO97 292 aa13.7□□□□□ -0.22
SOX9-201ENST00000245479 GPS2Q13227 327 aa13.7□□□□□ -0.22
SOX9-201ENST00000245479 GTPBP4Q9BZE4 634 aaKnown RBP13.7□□□□□ -0.22
SOX9-201ENST00000245479 ZNF853P0CG23 659 aa13.7□□□□□ -0.22
SOX9-201ENST00000245479 FKBP4Q02790 459 aaKnown RBP eCLIP13.7□□□□□ -0.227e-7■□□□□ 9
SOX9-201ENST00000245479 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
SOX9-201ENST00000245479 KIF2CQ99661 725 aa13.7□□□□□ -0.22
SOX9-201ENST00000245479 RTL1A6NKG5 1358 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 HCLS1P14317 486 aaPredicted RBP13.69□□□□□ -0.22
SOX9-201ENST00000245479 TPM4P67936 248 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 CNPY2Q9Y2B0 182 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
SOX9-201ENST00000245479 GADD45BO75293 160 aaPredicted RBP13.69□□□□□ -0.22
SOX9-201ENST00000245479 CHGBP05060 677 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 APPP05067 770 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 SLFNL1Q499Z3 407 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 DDX46Q7L014 1031 aaKnown RBP13.69□□□□□ -0.22
SOX9-201ENST00000245479 C16orf45Q96MC5 204 aaPredicted RBP13.69□□□□□ -0.22
SOX9-201ENST00000245479 SOS1Q07889 1333 aaPredicted RBP13.69□□□□□ -0.22
SOX9-201ENST00000245479 H3BQV1 296 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 GCP02774 474 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 CHMLP26374 656 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 WASHC4Q2M389 1173 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 IFFO2Q5TF58 517 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 TOM1L2Q6ZVM7 507 aa13.69□□□□□ -0.22
SOX9-201ENST00000245479 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.68□□□□□ -0.22
SOX9-201ENST00000245479 ATP8B2P98198 1209 aa13.68□□□□□ -0.22
SOX9-201ENST00000245479 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
SOX9-201ENST00000245479 FAM227BQ96M60 508 aa13.68□□□□□ -0.22
SOX9-201ENST00000245479 PUS7Q96PZ0 661 aaKnown RBP13.68□□□□□ -0.22
SOX9-201ENST00000245479 IL25Q9H293 177 aa13.68□□□□□ -0.22
SOX9-201ENST00000245479 PTPRCP08575 1304 aa13.68□□□□□ -0.22
SOX9-201ENST00000245479 GLI2P10070 1586 aa13.68□□□□□ -0.22
SOX9-201ENST00000245479 KRT28Q7Z3Y7 464 aa13.68□□□□□ -0.22
SOX9-201ENST00000245479 XAGE3Q8WTP9 111 aa13.68□□□□□ -0.22
SOX9-201ENST00000245479 CCDC129Q6ZRS4 1044 aa13.67□□□□□ -0.22
SOX9-201ENST00000245479 C17orf53Q8N3J3 647 aaPredicted RBP13.67□□□□□ -0.22
SOX9-201ENST00000245479 MNS1Q8NEH6 495 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms