RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 GAS2L2Q8NHY3 880 aa17.07■□□□□ 0.32
PDZD11-201ENST00000239666 KIF12Q96FN5 646 aa17.07■□□□□ 0.32
PDZD11-201ENST00000239666 PCDHB13Q9Y5F0 798 aa17.07■□□□□ 0.32
PDZD11-201ENST00000239666 RPS6KA4O75676 772 aa17.06■□□□□ 0.32
PDZD11-201ENST00000239666 RFC4P35249 363 aa17.06■□□□□ 0.32
PDZD11-201ENST00000239666 ITPK1Q13572 414 aa17.06■□□□□ 0.32
PDZD11-201ENST00000239666 SLC52A2Q9HAB3 445 aa17.06■□□□□ 0.32
PDZD11-201ENST00000239666 SCN11AQ9UI33 1791 aa17.06■□□□□ 0.32
PDZD11-201ENST00000239666 KDM6AO15550 1401 aaPredicted RBP17.05■□□□□ 0.32
PDZD11-201ENST00000239666 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
PDZD11-201ENST00000239666 MAP3K13O43283 966 aa17.05■□□□□ 0.32
PDZD11-201ENST00000239666 HMOX1P09601 288 aa17.05■□□□□ 0.32
PDZD11-201ENST00000239666 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
PDZD11-201ENST00000239666 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
PDZD11-201ENST00000239666 RNMTO43148 476 aaKnown RBP17.03■□□□□ 0.32
PDZD11-201ENST00000239666 PTCD1O75127 700 aaKnown RBP17.03■□□□□ 0.32
PDZD11-201ENST00000239666 NEFMP07197 916 aa17.03■□□□□ 0.32
PDZD11-201ENST00000239666 PELP1Q8IZL8 1130 aaKnown RBP17.03■□□□□ 0.32
PDZD11-201ENST00000239666 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.32
PDZD11-201ENST00000239666 TTC5Q8N0Z6 440 aa17.02■□□□□ 0.32
PDZD11-201ENST00000239666 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.32
PDZD11-201ENST00000239666 TEFQ10587 303 aa17.01■□□□□ 0.31
PDZD11-201ENST00000239666 MTHFSDQ2M296 383 aaKnown RBP17.01■□□□□ 0.31
PDZD11-201ENST00000239666 PCDHB8Q9UN66 801 aa17.01■□□□□ 0.31
PDZD11-201ENST00000239666 COL5A3P25940 1745 aaPredicted RBP17■□□□□ 0.31
PDZD11-201ENST00000239666 TGFB2P61812 414 aa17■□□□□ 0.31
PDZD11-201ENST00000239666 ARHGEF1Q92888 912 aaKnown RBP17■□□□□ 0.31
PDZD11-201ENST00000239666 PNNQ9H307 717 aaKnown RBP17■□□□□ 0.31
PDZD11-201ENST00000239666 FCHSD2O94868 740 aa16.99■□□□□ 0.31
PDZD11-201ENST00000239666 STARD3NLO95772 234 aa16.99■□□□□ 0.31
PDZD11-201ENST00000239666 CRKLP46109 303 aaKnown RBP16.99■□□□□ 0.31
PDZD11-201ENST00000239666 CCDC87Q9NVE4 849 aa16.99■□□□□ 0.31
PDZD11-201ENST00000239666 PARP3Q9Y6F1 533 aa16.99■□□□□ 0.31
PDZD11-201ENST00000239666 CICQ96RK0 1608 aaPredicted RBP16.99■□□□□ 0.31
PDZD11-201ENST00000239666 ZPR1O75312 459 aa16.98■□□□□ 0.31
PDZD11-201ENST00000239666 EVX2Q03828 476 aa16.98■□□□□ 0.31
PDZD11-201ENST00000239666 CNGB1Q14028 1251 aaPredicted RBP16.98■□□□□ 0.31
PDZD11-201ENST00000239666 NPM2Q86SE8 214 aaKnown RBP16.98■□□□□ 0.31
PDZD11-201ENST00000239666 NLGN2Q8NFZ4 835 aa16.98■□□□□ 0.31
PDZD11-201ENST00000239666 SLC4A9Q96Q91 983 aa16.98■□□□□ 0.31
PDZD11-201ENST00000239666 LGR6Q9HBX8 967 aa16.98■□□□□ 0.31
PDZD11-201ENST00000239666 MMP10P09238 476 aa16.97■□□□□ 0.31
PDZD11-201ENST00000239666 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
PDZD11-201ENST00000239666 MRC1P22897 1456 aa16.97■□□□□ 0.31
PDZD11-201ENST00000239666 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.31
PDZD11-201ENST00000239666 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
PDZD11-201ENST00000239666 PPP2R1AP30153 589 aa16.96■□□□□ 0.31
PDZD11-201ENST00000239666 IFNL1Q8IU54 200 aa16.96■□□□□ 0.31
PDZD11-201ENST00000239666 COL3A1P02461 1466 aaPredicted RBP16.95■□□□□ 0.3
PDZD11-201ENST00000239666 A0A087WZG4 1122 aa16.95■□□□□ 0.3
PDZD11-201ENST00000239666 U2AF1L5P0DN76 240 aaPredicted RBP16.95■□□□□ 0.3
PDZD11-201ENST00000239666 U2AF1Q01081 240 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDZD11-201ENST00000239666 ZNF784Q8NCA9 323 aaPredicted RBP16.95■□□□□ 0.3
PDZD11-201ENST00000239666 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
PDZD11-201ENST00000239666 GYS1P13807 737 aa16.94■□□□□ 0.3
PDZD11-201ENST00000239666 AMIGO3Q86WK7 504 aa16.94■□□□□ 0.3
PDZD11-201ENST00000239666 UTRNP46939 3433 aa16.94■□□□□ 0.3
PDZD11-201ENST00000239666 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
PDZD11-201ENST00000239666 ZNF790Q6PG37 636 aa16.93■□□□□ 0.3
PDZD11-201ENST00000239666 MYH14Q7Z406 1995 aaKnown RBP16.93■□□□□ 0.3
PDZD11-201ENST00000239666 USP42Q9H9J4 1324 aaKnown RBP16.93■□□□□ 0.3
PDZD11-201ENST00000239666 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.92■□□□□ 0.3
PDZD11-201ENST00000239666 STK25O00506 426 aa16.92■□□□□ 0.3
PDZD11-201ENST00000239666 CYP19A1P11511 503 aaPredicted RBP16.92■□□□□ 0.3
PDZD11-201ENST00000239666 PDAP1Q13442 181 aaKnown RBP16.92■□□□□ 0.3
PDZD11-201ENST00000239666 DNAJC10Q8IXB1 793 aa16.92■□□□□ 0.3
PDZD11-201ENST00000239666 ZFP91Q96JP5 570 aaPredicted RBP16.92■□□□□ 0.3
PDZD11-201ENST00000239666 FMNL2Q96PY5 1086 aa16.92■□□□□ 0.3
PDZD11-201ENST00000239666 RSPH6AQ9H0K4 717 aa16.92■□□□□ 0.3
PDZD11-201ENST00000239666 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
PDZD11-201ENST00000239666 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
PDZD11-201ENST00000239666 HS6ST3Q8IZP7 471 aa16.91■□□□□ 0.3
PDZD11-201ENST00000239666 YBX3P16989 372 aaKnown RBP eCLIP16.9■□□□□ 0.3
PDZD11-201ENST00000239666 CLCN6P51797 869 aa16.9■□□□□ 0.3
PDZD11-201ENST00000239666 RALBP1Q15311 655 aa16.9■□□□□ 0.3
PDZD11-201ENST00000239666 IL17REQ8NFR9 667 aa16.9■□□□□ 0.3
PDZD11-201ENST00000239666 NARFQ9UHQ1 456 aa16.9■□□□□ 0.3
PDZD11-201ENST00000239666 TJP1Q07157 1748 aa16.9■□□□□ 0.3
PDZD11-201ENST00000239666 CEMIPQ8WUJ3 1361 aa16.89■□□□□ 0.3
PDZD11-201ENST00000239666 KIF13BQ9NQT8 1826 aa16.89■□□□□ 0.29
PDZD11-201ENST00000239666 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
PDZD11-201ENST00000239666 SMIM5Q71RC9 77 aa16.89■□□□□ 0.29
PDZD11-201ENST00000239666 SOS1Q07889 1333 aaPredicted RBP16.89■□□□□ 0.29
PDZD11-201ENST00000239666 C4AP0C0L4 1744 aa16.88■□□□□ 0.29
PDZD11-201ENST00000239666 PSEN1P49768 467 aa16.88■□□□□ 0.29
PDZD11-201ENST00000239666 MS4A3Q96HJ5 214 aa16.88■□□□□ 0.29
PDZD11-201ENST00000239666 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
PDZD11-201ENST00000239666 HEG1Q9ULI3 1381 aa16.88■□□□□ 0.29
PDZD11-201ENST00000239666 PNISRQ8TF01 805 aaKnown RBP16.87■□□□□ 0.29
PDZD11-201ENST00000239666 BBXQ8WY36 941 aaPredicted RBP16.87■□□□□ 0.29
PDZD11-201ENST00000239666 PIM2Q9P1W9 311 aa16.87■□□□□ 0.29
PDZD11-201ENST00000239666 COL15A1P39059 1388 aa16.87■□□□□ 0.29
PDZD11-201ENST00000239666 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
PDZD11-201ENST00000239666 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
PDZD11-201ENST00000239666 TM4SF1P30408 202 aa16.86■□□□□ 0.29
PDZD11-201ENST00000239666 IL6STP40189 918 aaPredicted RBP16.86■□□□□ 0.29
PDZD11-201ENST00000239666 PHACTR3Q96KR7 559 aa16.86■□□□□ 0.29
PDZD11-201ENST00000239666 STK24Q9Y6E0 443 aa16.86■□□□□ 0.29
PDZD11-201ENST00000239666 GOLGB1Q14789 3259 aaKnown RBP16.86■□□□□ 0.29
PDZD11-201ENST00000239666 C10orf71Q711Q0 1435 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms