RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 DCAF5Q96JK2 942 aa12.04□□□□□ -0.48
TGFB3-201ENST00000238682 SOS1Q07889 1333 aaPredicted RBP12.04□□□□□ -0.48
TGFB3-201ENST00000238682 PNPLA7Q6ZV29 1317 aa12.04□□□□□ -0.48
TGFB3-201ENST00000238682 MRC1P22897 1456 aa12.04□□□□□ -0.48
TGFB3-201ENST00000238682 SENP3-EIF4A1A0A087X0R7 540 aa12.04□□□□□ -0.48
TGFB3-201ENST00000238682 E9PSI1 815 aa12.04□□□□□ -0.48
TGFB3-201ENST00000238682 PHKG2P15735 406 aa12.04□□□□□ -0.48
TGFB3-201ENST00000238682 ZNF827Q17R98 1081 aa12.04□□□□□ -0.48
TGFB3-201ENST00000238682 PTF1AQ7RTS3 328 aa12.04□□□□□ -0.48
TGFB3-201ENST00000238682 TUBGCP6Q96RT7 1819 aa12.03□□□□□ -0.48
TGFB3-201ENST00000238682 APAF1O14727 1248 aa12.03□□□□□ -0.48
TGFB3-201ENST00000238682 FBLN1P23142 703 aa12.03□□□□□ -0.48
TGFB3-201ENST00000238682 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
TGFB3-201ENST00000238682 TAF1LQ8IZX4 1826 aa12.03□□□□□ -0.48
TGFB3-201ENST00000238682 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
TGFB3-201ENST00000238682 RC3H1Q5TC82 1133 aaKnown RBP12.03□□□□□ -0.48
TGFB3-201ENST00000238682 LRRC4BQ9NT99 713 aa12.03□□□□□ -0.48
TGFB3-201ENST00000238682 TMOD3Q9NYL9 352 aa12.03□□□□□ -0.48
TGFB3-201ENST00000238682 TFCP2L1Q9NZI6 479 aa12.03□□□□□ -0.48
TGFB3-201ENST00000238682 DLG5Q8TDM6 1919 aa12.03□□□□□ -0.48
TGFB3-201ENST00000238682 ITGB4P16144 1822 aa12.03□□□□□ -0.48
TGFB3-201ENST00000238682 CYP27B1O15528 508 aa12.02□□□□□ -0.48
TGFB3-201ENST00000238682 TRMT2AQ8IZ69 625 aaKnown RBP12.02□□□□□ -0.48
TGFB3-201ENST00000238682 MKRN3Q13064 507 aaKnown RBP12.02□□□□□ -0.49
TGFB3-201ENST00000238682 TAF7LQ5H9L4 462 aa12.02□□□□□ -0.49
TGFB3-201ENST00000238682 MYH16Q9H6N6 1097 aa12.02□□□□□ -0.49
TGFB3-201ENST00000238682 CD2APQ9Y5K6 639 aa12.02□□□□□ -0.49
TGFB3-201ENST00000238682 WWC1Q8IX03 1113 aa12.01□□□□□ -0.49
TGFB3-201ENST00000238682 FGD1P98174 961 aa12.01□□□□□ -0.49
TGFB3-201ENST00000238682 AKAP4Q5JQC9 854 aa12.01□□□□□ -0.49
TGFB3-201ENST00000238682 SYTL4Q96C24 671 aaPredicted RBP12.01□□□□□ -0.49
TGFB3-201ENST00000238682 CNTNAP4Q9C0A0 1308 aa12.01□□□□□ -0.49
TGFB3-201ENST00000238682 ZBTB7AO95365 584 aa12□□□□□ -0.49
TGFB3-201ENST00000238682 RIPK4P57078 832 aa12□□□□□ -0.49
TGFB3-201ENST00000238682 ZC3H15Q8WU90 426 aaKnown RBP12□□□□□ -0.49
TGFB3-201ENST00000238682 AK7Q96M32 723 aa12□□□□□ -0.49
TGFB3-201ENST00000238682 GRIN3BO60391 1043 aa12□□□□□ -0.49
TGFB3-201ENST00000238682 IFT57Q9NWB7 429 aa12□□□□□ -0.49
TGFB3-201ENST00000238682 HMOX1P09601 288 aa11.99□□□□□ -0.49
TGFB3-201ENST00000238682 IRX6P78412 446 aaPredicted RBP11.99□□□□□ -0.49
TGFB3-201ENST00000238682 CCDC146Q8IYE0 955 aa11.99□□□□□ -0.49
TGFB3-201ENST00000238682 GNAT3A8MTJ3 354 aa11.99□□□□□ -0.49
TGFB3-201ENST00000238682 GNAI1P63096 354 aa11.99□□□□□ -0.49
TGFB3-201ENST00000238682 SLFN5Q08AF3 891 aa11.99□□□□□ -0.49
TGFB3-201ENST00000238682 C1orf141Q5JVX7 400 aa11.99□□□□□ -0.49
TGFB3-201ENST00000238682 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
TGFB3-201ENST00000238682 SYT17Q9BSW7 474 aa11.99□□□□□ -0.49
TGFB3-201ENST00000238682 CEMIPQ8WUJ3 1361 aa11.99□□□□□ -0.49
TGFB3-201ENST00000238682 IL27Q8NEV9 243 aa11.98□□□□□ -0.49
TGFB3-201ENST00000238682 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
TGFB3-201ENST00000238682 RTF1Q92541 710 aaKnown RBP11.98□□□□□ -0.49
TGFB3-201ENST00000238682 FHDC1Q9C0D6 1143 aaPredicted RBP11.98□□□□□ -0.49
TGFB3-201ENST00000238682 COL5A3P25940 1745 aaPredicted RBP11.98□□□□□ -0.49
TGFB3-201ENST00000238682 SCN11AQ9UI33 1791 aa11.98□□□□□ -0.49
TGFB3-201ENST00000238682 UBR3Q6ZT12 1888 aa11.97□□□□□ -0.49
TGFB3-201ENST00000238682 LOC102724428A0A0B4J2F2 783 aa11.97□□□□□ -0.49
TGFB3-201ENST00000238682 YY1P25490 414 aa11.97□□□□□ -0.49
TGFB3-201ENST00000238682 SIK1P57059 783 aa11.97□□□□□ -0.49
TGFB3-201ENST00000238682 PIGBQ92521 554 aa11.97□□□□□ -0.49
TGFB3-201ENST00000238682 SIPA1L3O60292 1781 aaPredicted RBP11.97□□□□□ -0.49
TGFB3-201ENST00000238682 PHACTR3Q96KR7 559 aa11.97□□□□□ -0.49
TGFB3-201ENST00000238682 ZNF853P0CG23 659 aa11.96□□□□□ -0.49
TGFB3-201ENST00000238682 MTHFSDQ2M296 383 aaKnown RBP11.96□□□□□ -0.49
TGFB3-201ENST00000238682 ZNF530Q6P9A1 599 aaPredicted RBP11.95□□□□□ -0.5
TGFB3-201ENST00000238682 KDM6AO15550 1401 aaPredicted RBP11.95□□□□□ -0.5
TGFB3-201ENST00000238682 MPRIPQ6WCQ1 1025 aa11.95□□□□□ -0.5
TGFB3-201ENST00000238682 COL23A1Q86Y22 540 aaPredicted RBP11.95□□□□□ -0.5
TGFB3-201ENST00000238682 VIRMAQ69YN4 1812 aaKnown RBP11.94□□□□□ -0.5
TGFB3-201ENST00000238682 KDM3BQ7LBC6 1761 aa11.94□□□□□ -0.5
TGFB3-201ENST00000238682 MFAP1P55081 439 aaKnown RBP11.94□□□□□ -0.5
TGFB3-201ENST00000238682 CABP4P57796 275 aa11.94□□□□□ -0.5
TGFB3-201ENST00000238682 DUSP27Q5VZP5 1158 aa11.94□□□□□ -0.5
TGFB3-201ENST00000238682 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
TGFB3-201ENST00000238682 ATG3Q9NT62 314 aa11.94□□□□□ -0.5
TGFB3-201ENST00000238682 FAM177A1Q8N128 213 aaPredicted RBP11.93□□□□□ -0.5
TGFB3-201ENST00000238682 KIF13BQ9NQT8 1826 aa11.93□□□□□ -0.5
TGFB3-201ENST00000238682 HOXB7P09629 217 aa11.93□□□□□ -0.5
TGFB3-201ENST00000238682 NLGN1Q8N2Q7 840 aa11.93□□□□□ -0.5
TGFB3-201ENST00000238682 KCNV2Q8TDN2 545 aa11.93□□□□□ -0.5
TGFB3-201ENST00000238682 CHL1O00533 1208 aa11.92□□□□□ -0.5
TGFB3-201ENST00000238682 RBM19Q9Y4C8 960 aaKnown RBP11.92□□□□□ -0.5
TGFB3-201ENST00000238682 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
TGFB3-201ENST00000238682 RTCBQ9Y3I0 505 aaKnown RBP11.92□□□□□ -0.5
TGFB3-201ENST00000238682 PDZRN3Q9UPQ7 1066 aa11.91□□□□□ -0.5
TGFB3-201ENST00000238682 TJP1Q07157 1748 aa11.91□□□□□ -0.5
TGFB3-201ENST00000238682 C10orf71Q711Q0 1435 aa11.91□□□□□ -0.5
TGFB3-201ENST00000238682 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
TGFB3-201ENST00000238682 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
TGFB3-201ENST00000238682 TGFB2P61812 414 aa11.91□□□□□ -0.5
TGFB3-201ENST00000238682 TAF7Q15545 349 aaPredicted RBP11.91□□□□□ -0.5
TGFB3-201ENST00000238682 TEX13AQ9BXU3 409 aaPredicted RBP11.91□□□□□ -0.5
TGFB3-201ENST00000238682 CHD4Q14839 1912 aa11.91□□□□□ -0.5
TGFB3-201ENST00000238682 RNMTO43148 476 aaKnown RBP11.9□□□□□ -0.5
TGFB3-201ENST00000238682 LINC00116Q8NCU8 138 aa11.9□□□□□ -0.5
TGFB3-201ENST00000238682 C4AP0C0L4 1744 aa11.9□□□□□ -0.5
TGFB3-201ENST00000238682 A0A087WZG4 1122 aa11.9□□□□□ -0.5
TGFB3-201ENST00000238682 ALDH1L2Q3SY69 923 aa11.9□□□□□ -0.5
TGFB3-201ENST00000238682 PDGFDQ9GZP0 370 aaPredicted RBP11.9□□□□□ -0.5
TGFB3-201ENST00000238682 UBR2Q8IWV8 1755 aa11.89□□□□□ -0.51
TGFB3-201ENST00000238682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms