RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 LRRC59Q96AG4 307 aaKnown RBP26.82■■□□□ 1.88
SMARCD2-201ENST00000225742 HEG1Q9ULI3 1381 aa26.82■■□□□ 1.88
SMARCD2-201ENST00000225742 SURF6O75683 361 aaKnown RBP26.81■■□□□ 1.88
SMARCD2-201ENST00000225742 ALDH1L1O75891 902 aa26.81■■□□□ 1.88
SMARCD2-201ENST00000225742 RILPL2Q969X0 211 aa26.81■■□□□ 1.88
SMARCD2-201ENST00000225742 GRPEL1Q9HAV7 217 aa26.81■■□□□ 1.88
SMARCD2-201ENST00000225742 ADAMTS7Q9UKP4 1686 aa26.81■■□□□ 1.88
SMARCD2-201ENST00000225742 ZBTB7CA1YPR0 619 aa26.81■■□□□ 1.88
SMARCD2-201ENST00000225742 KLHL40Q2TBA0 621 aa26.81■■□□□ 1.88
SMARCD2-201ENST00000225742 RHPN1Q8TCX5 695 aa26.81■■□□□ 1.88
SMARCD2-201ENST00000225742 ANKRD24Q8TF21 1146 aa26.81■■□□□ 1.88
SMARCD2-201ENST00000225742 RBM33Q96EV2 1170 aaKnown RBP26.81■■□□□ 1.88
SMARCD2-201ENST00000225742 SIPA1L3O60292 1781 aaPredicted RBP26.8■■□□□ 1.88
SMARCD2-201ENST00000225742 PI4KAP2A4QPH2 592 aa26.8■■□□□ 1.88
SMARCD2-201ENST00000225742 PI4KAP1Q8N8J0 262 aa26.8■■□□□ 1.88
SMARCD2-201ENST00000225742 ADCY9O60503 1353 aa26.79■■□□□ 1.88
SMARCD2-201ENST00000225742 MTX1Q13505 466 aa26.79■■□□□ 1.88
SMARCD2-201ENST00000225742 TSHZ3Q63HK5 1081 aa26.79■■□□□ 1.88
SMARCD2-201ENST00000225742 SRGAP3O43295 1099 aa26.79■■□□□ 1.88
SMARCD2-201ENST00000225742 KCNQ3O43525 872 aa26.79■■□□□ 1.88
SMARCD2-201ENST00000225742 MPRIPQ6WCQ1 1025 aa26.79■■□□□ 1.88
SMARCD2-201ENST00000225742 ORAI2Q96SN7 254 aa26.79■■□□□ 1.88
SMARCD2-201ENST00000225742 AK9Q5TCS8 1911 aa26.78■■□□□ 1.88
SMARCD2-201ENST00000225742 PXDNQ92626 1479 aa26.78■■□□□ 1.88
SMARCD2-201ENST00000225742 USP42Q9H9J4 1324 aaKnown RBP26.78■■□□□ 1.88
SMARCD2-201ENST00000225742 NEK4P51957 841 aa26.77■■□□□ 1.88
SMARCD2-201ENST00000225742 ANO2Q9NQ90 1003 aa26.76■■□□□ 1.88
SMARCD2-201ENST00000225742 GIGYF1O75420 1035 aaPredicted RBP26.76■■□□□ 1.87
SMARCD2-201ENST00000225742 NBPF7P0C2Y1 421 aaPredicted RBP26.76■■□□□ 1.87
SMARCD2-201ENST00000225742 CUL4AQ13619 759 aa26.75■■□□□ 1.87
SMARCD2-201ENST00000225742 KRT28Q7Z3Y7 464 aa26.75■■□□□ 1.87
SMARCD2-201ENST00000225742 IL1RAPL2Q9NP60 686 aa26.75■■□□□ 1.87
SMARCD2-201ENST00000225742 KSR2Q6VAB6 950 aa26.74■■□□□ 1.87
SMARCD2-201ENST00000225742 PI4K2BQ8TCG2 481 aa26.74■■□□□ 1.87
SMARCD2-201ENST00000225742 INTS4Q96HW7 963 aaKnown RBP26.74■■□□□ 1.87
SMARCD2-201ENST00000225742 HYPKQ9NX55 129 aa26.74■■□□□ 1.87
SMARCD2-201ENST00000225742 TTC41PQ6P2S7 1318 aa26.74■■□□□ 1.87
SMARCD2-201ENST00000225742 CRYBG1Q9Y4K1 1723 aa26.73■■□□□ 1.87
SMARCD2-201ENST00000225742 NUTM1Q86Y26 1132 aa26.73■■□□□ 1.87
SMARCD2-201ENST00000225742 TMX3Q96JJ7 454 aa26.73■■□□□ 1.87
SMARCD2-201ENST00000225742 DDX49Q9Y6V7 483 aaKnown RBP26.73■■□□□ 1.87
SMARCD2-201ENST00000225742 PLEKHG2Q9H7P9 1386 aa26.73■■□□□ 1.87
SMARCD2-201ENST00000225742 C1orf167Q5SNV9 1468 aa26.73■■□□□ 1.87
SMARCD2-201ENST00000225742 ABCC6O95255 1503 aa26.72■■□□□ 1.87
SMARCD2-201ENST00000225742 UNC5CLQ8IV45 518 aa26.72■■□□□ 1.87
SMARCD2-201ENST00000225742 CNTROBQ8N137 903 aa26.72■■□□□ 1.87
SMARCD2-201ENST00000225742 ERC1Q8IUD2 1116 aa26.72■■□□□ 1.87
SMARCD2-201ENST00000225742 ZGPATQ8N5A5 531 aaKnown RBP26.72■■□□□ 1.87
SMARCD2-201ENST00000225742 ALS2Q96Q42 1657 aa26.71■■□□□ 1.87
SMARCD2-201ENST00000225742 HSPA4P34932 840 aa26.71■■□□□ 1.87
SMARCD2-201ENST00000225742 PROSER2Q86WR7 435 aaPredicted RBP26.71■■□□□ 1.87
SMARCD2-201ENST00000225742 MCTP1Q6DN14 999 aa26.7■■□□□ 1.87
SMARCD2-201ENST00000225742 PANK2Q9BZ23 570 aa26.7■■□□□ 1.87
SMARCD2-201ENST00000225742 DDX58O95786 925 aaKnown RBP26.69■■□□□ 1.86
SMARCD2-201ENST00000225742 ARXQ96QS3 562 aa26.69■■□□□ 1.86
SMARCD2-201ENST00000225742 C19orf44Q9H6X5 657 aa26.69■■□□□ 1.86
SMARCD2-201ENST00000225742 LMBRD1Q9NUN5 540 aa26.69■■□□□ 1.86
SMARCD2-201ENST00000225742 PALD1Q9ULE6 856 aa26.69■■□□□ 1.86
SMARCD2-201ENST00000225742 MAP3K2Q9Y2U5 619 aa26.69■■□□□ 1.86
SMARCD2-201ENST00000225742 C9orf78Q9NZ63 289 aaPredicted RBP26.69■■□□□ 1.86
SMARCD2-201ENST00000225742 GLRX3O76003 335 aaKnown RBP26.68■■□□□ 1.86
SMARCD2-201ENST00000225742 XPCQ01831 940 aaPredicted RBP26.68■■□□□ 1.86
SMARCD2-201ENST00000225742 UTYO14607 1347 aa26.68■■□□□ 1.86
SMARCD2-201ENST00000225742 SGSM2O43147 1006 aa26.67■■□□□ 1.86
SMARCD2-201ENST00000225742 LMOD2Q6P5Q4 547 aa26.67■■□□□ 1.86
SMARCD2-201ENST00000225742 DDX21Q9NR30 783 aaKnown RBP eCLIP26.67■■□□□ 1.86
SMARCD2-201ENST00000225742 ZDHHC9Q9Y397 364 aa26.67■■□□□ 1.86
SMARCD2-201ENST00000225742 RGPD5Q99666 1765 aa26.67■■□□□ 1.86
SMARCD2-201ENST00000225742 GAS2L3Q86XJ1 694 aa26.67■■□□□ 1.86
SMARCD2-201ENST00000225742 LINS1Q8NG48 757 aa26.67■■□□□ 1.86
SMARCD2-201ENST00000225742 ERBB3P21860 1342 aa26.66■■□□□ 1.86
SMARCD2-201ENST00000225742 RAD50Q92878 1312 aa26.66■■□□□ 1.86
SMARCD2-201ENST00000225742 ANXA1P04083 346 aa26.66■■□□□ 1.86
SMARCD2-201ENST00000225742 ZNF445P59923 1031 aa26.66■■□□□ 1.86
SMARCD2-201ENST00000225742 OS9Q13438 667 aaPredicted RBP26.66■■□□□ 1.86
SMARCD2-201ENST00000225742 CLASRPQ8N2M8 674 aaKnown RBP26.66■■□□□ 1.86
SMARCD2-201ENST00000225742 GPATCH3Q96I76 525 aa26.66■■□□□ 1.86
SMARCD2-201ENST00000225742 AXIN2Q9Y2T1 843 aa26.66■■□□□ 1.86
SMARCD2-201ENST00000225742 PKP1Q13835 747 aa26.65■■□□□ 1.86
SMARCD2-201ENST00000225742 SCN11AQ9UI33 1791 aa26.65■■□□□ 1.86
SMARCD2-201ENST00000225742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.65■■□□□ 1.86
SMARCD2-201ENST00000225742 RUFY2Q8WXA3 655 aa26.63■■□□□ 1.85
SMARCD2-201ENST00000225742 BRD1O95696 1058 aa26.62■■□□□ 1.85
SMARCD2-201ENST00000225742 PROSER3Q2NL68 480 aa26.62■■□□□ 1.85
SMARCD2-201ENST00000225742 RAPGEF4Q8WZA2 1011 aa26.62■■□□□ 1.85
SMARCD2-201ENST00000225742 PLEKHG5O94827 1062 aa26.62■■□□□ 1.85
SMARCD2-201ENST00000225742 KIAA1211Q6ZU35 1233 aa26.62■■□□□ 1.85
SMARCD2-201ENST00000225742 LSG1Q9H089 658 aaKnown RBP26.62■■□□□ 1.85
SMARCD2-201ENST00000225742 ECHDC1Q9NTX5 307 aa26.62■■□□□ 1.85
SMARCD2-201ENST00000225742 SPG7Q9UQ90 795 aa26.61■■□□□ 1.85
SMARCD2-201ENST00000225742 DCCP43146 1447 aa26.61■■□□□ 1.85
SMARCD2-201ENST00000225742 GRM8O00222 908 aa26.6■■□□□ 1.85
SMARCD2-201ENST00000225742 TATP17735 454 aaPredicted RBP26.6■■□□□ 1.85
SMARCD2-201ENST00000225742 LARP1Q6PKG0 1096 aaKnown RBP26.59■■□□□ 1.85
SMARCD2-201ENST00000225742 SLC52A2Q9HAB3 445 aa26.59■■□□□ 1.85
SMARCD2-201ENST00000225742 RRAGDQ9NQL2 400 aaPredicted RBP26.59■■□□□ 1.85
SMARCD2-201ENST00000225742 IL25Q9H293 177 aa26.58■■□□□ 1.85
SMARCD2-201ENST00000225742 NPHP3Q7Z494 1330 aa26.58■■□□□ 1.85
SMARCD2-201ENST00000225742 COL18A1P39060 1754 aa26.58■■□□□ 1.85
SMARCD2-201ENST00000225742 PRPF40AO75400 957 aaKnown RBP26.58■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms