RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 GJB2P29033 226 aa15.15■□□□□ 0.02
PITRM1-201ENST00000224949 ATP2B3Q16720 1220 aa15.15■□□□□ 0.02
PITRM1-201ENST00000224949 FAM173BQ6P4H8 233 aa15.15■□□□□ 0.02
PITRM1-201ENST00000224949 SNX14Q9Y5W7 946 aa15.15■□□□□ 0.02
PITRM1-201ENST00000224949 RIOK3O14730 519 aaKnown RBP15.15■□□□□ 0.02
PITRM1-201ENST00000224949 LARGE1O95461 756 aa15.15■□□□□ 0.02
PITRM1-201ENST00000224949 HSPA4P34932 840 aa15.14■□□□□ 0.01
PITRM1-201ENST00000224949 CKAP2LQ8IYA6 745 aa15.14■□□□□ 0.01
PITRM1-201ENST00000224949 NECAB1Q8N987 351 aa15.14■□□□□ 0.01
PITRM1-201ENST00000224949 LIMCH1Q9UPQ0 1083 aa15.14■□□□□ 0.01
PITRM1-201ENST00000224949 ATP6V1DQ9Y5K8 247 aa15.14■□□□□ 0.01
PITRM1-201ENST00000224949 JAKMIP1Q96N16 626 aaKnown RBP15.14■□□□□ 0.01
PITRM1-201ENST00000224949 CPSF1Q10570 1443 aaKnown RBP15.14■□□□□ 0.01
PITRM1-201ENST00000224949 RPAP1Q9BWH6 1393 aaPredicted RBP15.14■□□□□ 0.01
PITRM1-201ENST00000224949 GOLGA6L4A6NEF3 574 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 U2AF2P26368 475 aaKnown RBP eCLIP15.13■□□□□ 0.01
PITRM1-201ENST00000224949 RUFY3Q7L099 469 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 DIAPH3Q9NSV4 1193 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 SRGAP3O43295 1099 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 LETM1O95202 739 aaPredicted RBP15.13■□□□□ 0.01
PITRM1-201ENST00000224949 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 ATP7BP35670 1465 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 AP5Z1O43299 807 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 AMPHP49418 695 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 CCDC30Q5VVM6 783 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 PRPF40BQ6NWY9 871 aaKnown RBP15.13■□□□□ 0.01
PITRM1-201ENST00000224949 PPP1R42Q7Z4L9 355 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 C16orf45Q96MC5 204 aaPredicted RBP15.13■□□□□ 0.01
PITRM1-201ENST00000224949 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 KIAA0232Q92628 1395 aa15.13■□□□□ 0.01
PITRM1-201ENST00000224949 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
PITRM1-201ENST00000224949 PTGS1P23219 599 aa15.12■□□□□ 0.01
PITRM1-201ENST00000224949 TCEANC2Q96MN5 208 aa15.12■□□□□ 0.01
PITRM1-201ENST00000224949 CPS1P31327 1500 aa15.12■□□□□ 0.01
PITRM1-201ENST00000224949 MAP3K19Q56UN5 1328 aa15.12■□□□□ 0.01
PITRM1-201ENST00000224949 GOLGA6L6A8MZA4 724 aa15.12■□□□□ 0.01
PITRM1-201ENST00000224949 ZNF592Q92610 1267 aa15.12■□□□□ 0.01
PITRM1-201ENST00000224949 NUTM2GQ5VZR2 741 aa15.12■□□□□ 0.01
PITRM1-201ENST00000224949 CNTROBQ8N137 903 aa15.12■□□□□ 0.01
PITRM1-201ENST00000224949 CCDC192P0DO97 292 aa15.11■□□□□ 0.01
PITRM1-201ENST00000224949 LUZP1Q86V48 1076 aa15.11■□□□□ 0.01
PITRM1-201ENST00000224949 SALL3Q9BXA9 1300 aa15.11■□□□□ 0.01
PITRM1-201ENST00000224949 AATKQ6ZMQ8 1374 aa15.11■□□□□ 0.01
PITRM1-201ENST00000224949 KCNF1Q9H3M0 494 aa15.11■□□□□ 0.01
PITRM1-201ENST00000224949 PHAXQ9H814 394 aaKnown RBP15.11■□□□□ 0.01
PITRM1-201ENST00000224949 PDRG1Q9NUG6 133 aa15.11■□□□□ 0.01
PITRM1-201ENST00000224949 ZSCAN20P17040 1043 aaPredicted RBP15.1■□□□□ 0.01
PITRM1-201ENST00000224949 RHPN1Q8TCX5 695 aa15.1■□□□□ 0.01
PITRM1-201ENST00000224949 PODXL2Q9NZ53 605 aa15.1■□□□□ 0.01
PITRM1-201ENST00000224949 SGSM2O43147 1006 aa15.1■□□□□ 0.01
PITRM1-201ENST00000224949 DMTNQ08495 405 aa15.1■□□□□ 0.01
PITRM1-201ENST00000224949 TFIP11Q9UBB9 837 aaKnown RBP15.1■□□□□ 0.01
PITRM1-201ENST00000224949 RAD50Q92878 1312 aa15.1■□□□□ 0.01
PITRM1-201ENST00000224949 TRIM5Q9C035 493 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 USP44Q9H0E7 712 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 TTC21BQ7Z4L5 1316 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 ANXA1P04083 346 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 LRMPQ12912 555 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 STK3Q13188 491 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 ADCK5Q3MIX3 580 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 PLPPR3Q6T4P5 718 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 ACEP12821 1306 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 LARP1BQ659C4 914 aaKnown RBP15.09■□□□□ 0.01
PITRM1-201ENST00000224949 CCDC186Q7Z3E2 898 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 KIAA1524Q8TCG1 905 aa15.09■□□□□ 0.01
PITRM1-201ENST00000224949 SOS1Q07889 1333 aaPredicted RBP15.08■□□□□ 0.01
PITRM1-201ENST00000224949 PRR36Q9H6K5 1346 aa15.08■□□□□ 0.01
PITRM1-201ENST00000224949 NUP62CLQ9H1M0 184 aa15.08■□□□□ 0
PITRM1-201ENST00000224949 STAP2Q9UGK3 403 aa15.08■□□□□ 0
PITRM1-201ENST00000224949 C14orf37Q86TY3 774 aa15.08■□□□□ 0
PITRM1-201ENST00000224949 METP08581 1390 aa15.08■□□□□ 0
PITRM1-201ENST00000224949 PTH1RQ03431 593 aa15.07■□□□□ 0
PITRM1-201ENST00000224949 MTMR6Q9Y217 621 aa15.07■□□□□ 0
PITRM1-201ENST00000224949 CYP46A1Q9Y6A2 500 aa15.07■□□□□ 0
PITRM1-201ENST00000224949 MAP3K11Q16584 847 aa15.07■□□□□ 0
PITRM1-201ENST00000224949 LSG1Q9H089 658 aaKnown RBP15.07■□□□□ 0
PITRM1-201ENST00000224949 TNMDQ9H2S6 317 aa15.07■□□□□ 0
PITRM1-201ENST00000224949 NRBP1Q9UHY1 535 aa15.07■□□□□ 0
PITRM1-201ENST00000224949 LIG1P18858 919 aa15.07■□□□□ 0
PITRM1-201ENST00000224949 FOSBP53539 338 aa15.07■□□□□ 0
PITRM1-201ENST00000224949 TMEM87AQ8NBN3 555 aa15.07■□□□□ 0
PITRM1-201ENST00000224949 SSH2Q76I76 1423 aa15.07■□□□□ 0
PITRM1-201ENST00000224949 NBPF7P0C2Y1 421 aaPredicted RBP15.06■□□□□ 0
PITRM1-201ENST00000224949 TTC14Q96N46 770 aa15.06■□□□□ 0
PITRM1-201ENST00000224949 SPTLC3Q9NUV7 552 aa15.06■□□□□ 0
PITRM1-201ENST00000224949 CRB1P82279 1406 aa15.06■□□□□ 0
PITRM1-201ENST00000224949 NAA30Q147X3 362 aaPredicted RBP15.06■□□□□ 0
PITRM1-201ENST00000224949 ZNF771Q7L3S4 317 aaPredicted RBP15.06■□□□□ 0
PITRM1-201ENST00000224949 BICD2Q8TD16 824 aa15.06■□□□□ 0
PITRM1-201ENST00000224949 FBXW7Q969H0 707 aa15.06■□□□□ 0
PITRM1-201ENST00000224949 KRT85P78386 507 aa15.05■□□□□ 0
PITRM1-201ENST00000224949 ANO6Q4KMQ2 910 aa15.05■□□□□ 0
PITRM1-201ENST00000224949 PI4K2BQ8TCG2 481 aa15.05■□□□□ 0
PITRM1-201ENST00000224949 KIF1BPQ96EK5 621 aa15.05■□□□□ 0
PITRM1-201ENST00000224949 DACT1Q9NYF0 836 aa15.05■□□□□ 0
PITRM1-201ENST00000224949 CLTCQ00610 1675 aaKnown RBP15.05■□□□□ -0
PITRM1-201ENST00000224949 CEBPZQ03701 1054 aaKnown RBP15.05■□□□□ -0
PITRM1-201ENST00000224949 TYRO3Q06418 890 aa15.05■□□□□ -0
PITRM1-201ENST00000224949 USHBP1Q8N6Y0 703 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms