RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 FEZ2Q9UHY8 353 aaPredicted RBP7.93□□□□□ -1.14
RBM28-201ENST00000223073 LRRC23Q53EV4 343 aaPredicted RBP7.93□□□□□ -1.14
RBM28-201ENST00000223073 ARMC9Q7Z3E5 817 aa7.93□□□□□ -1.14
RBM28-201ENST00000223073 HDGFL2Q7Z4V5 671 aaPredicted RBP7.93□□□□□ -1.14
RBM28-201ENST00000223073 MED4Q9NPJ6 270 aa7.93□□□□□ -1.14
RBM28-201ENST00000223073 TRIM7Q9C029 511 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 RAB3GAP1Q15042 981 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 KIF27Q86VH2 1401 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 YEATS4O95619 227 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 MMS22LQ6ZRQ5 1243 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 CACNA2D3Q8IZS8 1091 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 CCDC174Q6PII3 467 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.92□□□□□ -1.14
RBM28-201ENST00000223073 CCDC6Q16204 474 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 GBP5Q96PP8 586 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 PCK1P35558 622 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 PPFIBP2Q8ND30 876 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 MAP3K9P80192 1104 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 KRT32Q14532 448 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 ME1P48163 572 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 PPFIA1Q13136 1202 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 CROCCP2Q86T23 111 aa7.92□□□□□ -1.14
RBM28-201ENST00000223073 FSD2A1L4K1 749 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 DDX27Q96GQ7 796 aaKnown RBP7.91□□□□□ -1.14
RBM28-201ENST00000223073 SUFUQ9UMX1 484 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 KIF4AO95239 1232 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 MAGEA9P43362 315 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 PPFIA2O75334 1257 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 CASTP20810 708 aaKnown RBP7.91□□□□□ -1.14
RBM28-201ENST00000223073 GNG11P61952 73 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 THEGQ9P2T0 379 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 SRGAP3O43295 1099 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 MPNDQ8N594 471 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 HYPKQ9NX55 129 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 CCDC152Q4G0S7 254 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 PANK2Q9BZ23 570 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 IFIT2P09913 472 aaKnown RBP7.91□□□□□ -1.14
RBM28-201ENST00000223073 KIF2CQ99661 725 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 SAMD15Q9P1V8 674 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 PANK1Q8TE04 598 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 A0A087WUV0 522 aaPredicted RBP7.91□□□□□ -1.14
RBM28-201ENST00000223073 SETDB1Q15047 1291 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 ACRBPQ8NEB7 543 aa7.91□□□□□ -1.14
RBM28-201ENST00000223073 STK38Q15208 465 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 VPS18Q9P253 973 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 CCDC158Q5M9N0 1113 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 CHD1LQ86WJ1 897 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 LNPKQ9C0E8 428 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 MYO1BO43795 1136 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 IGSF3O75054 1194 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 CCDC155Q8N6L0 562 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 NOL3O60936 208 aaKnown RBP7.9□□□□□ -1.14
RBM28-201ENST00000223073 CFAP100Q494V2 611 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 PFDN1O60925 122 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 RAI14Q9P0K7 980 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 ZNF165P49910 485 aa7.9□□□□□ -1.14
RBM28-201ENST00000223073 VCX3BQ9H321 246 aa7.9□□□□□ -1.15
RBM28-201ENST00000223073 USP47Q96K76 1375 aa7.9□□□□□ -1.15
RBM28-201ENST00000223073 CDKL5O76039 1030 aa7.9□□□□□ -1.15
RBM28-201ENST00000223073 FGFR1OPO95684 399 aaKnown RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 ALDH3A1P30838 453 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 IFI16Q16666 785 aaKnown RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 CACNA2D4Q7Z3S7 1137 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 TBC1D31Q96DN5 1066 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 SF3B2Q13435 895 aaKnown RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 PHLDB2Q86SQ0 1253 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 GPR161Q8N6U8 529 aaKnown RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 EXOC4Q96A65 974 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 NAP1L3Q99457 506 aaPredicted RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 FOSBP53539 338 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 DYNC1I2Q13409 638 aaKnown RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 VPS36Q86VN1 386 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 RABEP2Q9H5N1 569 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 CCDC129Q6ZRS4 1044 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 PYM1Q9BRP8 204 aaKnown RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 HSP90AA5PQ58FG0 334 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.89□□□□□ -1.153e-7■■■□□ 16.8
RBM28-201ENST00000223073 PLEKHH2Q8IVE3 1493 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 MARCH6O60337 910 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 VAV2P52735 878 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 CWC25Q9NXE8 425 aaPredicted RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 APAF1O14727 1248 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 CHCHD3Q9NX63 227 aaKnown RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 MVPQ14764 893 aaKnown RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 FBXW7Q969H0 707 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 CABS1Q96KC9 395 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 VCX3AQ9NNX9 186 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 RNF8O76064 485 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 PKD2Q13563 968 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 SNCBQ16143 134 aa7.89□□□□□ -1.15
RBM28-201ENST00000223073 NAA16Q6N069 864 aaPredicted RBP7.89□□□□□ -1.15
RBM28-201ENST00000223073 LRRD1A4D1F6 860 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 CTAGE1Q96RT6 745 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 ZRANB2O95218 330 aaKnown RBP eCLIP7.88□□□□□ -1.15
RBM28-201ENST00000223073 RASSF2P50749 326 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 RPAP2Q8IXW5 612 aaPredicted RBP7.88□□□□□ -1.15
RBM28-201ENST00000223073 ATRIPQ8WXE1 791 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 ODF2LQ9ULJ1 636 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 HOOK3Q86VS8 718 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 CCDC110Q8TBZ0 833 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms