RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 IFIT5Q13325 482 aaKnown RBP20.78■□□□□ 0.92
EXTL3-201ENST00000220562 LARP6Q9BRS8 491 aaKnown RBP20.78■□□□□ 0.92
EXTL3-201ENST00000220562 SCAND2PQ9GZW5 306 aaPredicted RBP20.78■□□□□ 0.92
EXTL3-201ENST00000220562 ZNF213O14771 459 aa20.78■□□□□ 0.92
EXTL3-201ENST00000220562 RANBP6O60518 1105 aaKnown RBP20.78■□□□□ 0.92
EXTL3-201ENST00000220562 CCDC82Q8N4S0 544 aa20.78■□□□□ 0.92
EXTL3-201ENST00000220562 EMILIN1Q9Y6C2 1016 aa20.78■□□□□ 0.92
EXTL3-201ENST00000220562 ZSCAN12O43309 604 aa20.78■□□□□ 0.92
EXTL3-201ENST00000220562 SLC5A1P13866 664 aa20.77■□□□□ 0.92
EXTL3-201ENST00000220562 MAP3K12Q12852 859 aa20.77■□□□□ 0.92
EXTL3-201ENST00000220562 AMOTQ4VCS5 1084 aa20.77■□□□□ 0.92
EXTL3-201ENST00000220562 CLIP2Q9UDT6 1046 aa20.77■□□□□ 0.92
EXTL3-201ENST00000220562 POTEJP0CG39 1038 aa20.77■□□□□ 0.92
EXTL3-201ENST00000220562 DNAAF4Q8WXU2 420 aa20.77■□□□□ 0.92
EXTL3-201ENST00000220562 UBA5Q9GZZ9 404 aa20.77■□□□□ 0.91
EXTL3-201ENST00000220562 CCDC196A0A1B0GTZ2 297 aa20.76■□□□□ 0.91
EXTL3-201ENST00000220562 TOP1P11387 765 aaKnown RBP20.76■□□□□ 0.91
EXTL3-201ENST00000220562 CTCFLQ8NI51 663 aaPredicted RBP20.76■□□□□ 0.91
EXTL3-201ENST00000220562 PHAXQ9H814 394 aaKnown RBP20.76■□□□□ 0.91
EXTL3-201ENST00000220562 KIF5CO60282 957 aa20.75■□□□□ 0.91
EXTL3-201ENST00000220562 EZRP15311 586 aaKnown RBP20.75■□□□□ 0.91
EXTL3-201ENST00000220562 CCT2P78371 535 aaKnown RBP20.75■□□□□ 0.91
EXTL3-201ENST00000220562 CACNA2D4Q7Z3S7 1137 aa20.75■□□□□ 0.91
EXTL3-201ENST00000220562 TMX1Q9H3N1 280 aa20.75■□□□□ 0.91
EXTL3-201ENST00000220562 TMCO3Q6UWJ1 677 aa20.75■□□□□ 0.91
EXTL3-201ENST00000220562 GOLGA8AA7E2F4 631 aa20.75■□□□□ 0.91
EXTL3-201ENST00000220562 GOLGA8BA8MQT2 603 aa20.75■□□□□ 0.91
EXTL3-201ENST00000220562 LIMCH1Q9UPQ0 1083 aa20.75■□□□□ 0.91
EXTL3-201ENST00000220562 TRMT112Q9UI30 125 aaKnown RBP20.75■□□□□ 0.91
EXTL3-201ENST00000220562 CCDC96Q2M329 555 aa20.74■□□□□ 0.91
EXTL3-201ENST00000220562 ZNF444Q8N0Y2 327 aaPredicted RBP20.74■□□□□ 0.91
EXTL3-201ENST00000220562 CKAP2LQ8IYA6 745 aa20.74■□□□□ 0.91
EXTL3-201ENST00000220562 HYPKQ9NX55 129 aa20.74■□□□□ 0.91
EXTL3-201ENST00000220562 KIF14Q15058 1648 aa20.74■□□□□ 0.91
EXTL3-201ENST00000220562 TNPO1Q92973 898 aaKnown RBP20.73■□□□□ 0.91
EXTL3-201ENST00000220562 CRACR2AQ9BSW2 395 aa20.73■□□□□ 0.91
EXTL3-201ENST00000220562 ANKRD18BA2A2Z9 1011 aa20.73■□□□□ 0.91
EXTL3-201ENST00000220562 CCDC178Q5BJE1 867 aa20.73■□□□□ 0.91
EXTL3-201ENST00000220562 C11orf95C9JLR9 678 aaPredicted RBP20.73■□□□□ 0.91
EXTL3-201ENST00000220562 KIF2AO00139 706 aaPredicted RBP20.73■□□□□ 0.91
EXTL3-201ENST00000220562 NLRP5P59047 1200 aa20.73■□□□□ 0.91
EXTL3-201ENST00000220562 CNNM3Q8NE01 707 aa20.73■□□□□ 0.91
EXTL3-201ENST00000220562 GJB2P29033 226 aa20.73■□□□□ 0.91
EXTL3-201ENST00000220562 NUP88Q99567 741 aaPredicted RBP20.73■□□□□ 0.91
EXTL3-201ENST00000220562 PTPRCP08575 1304 aa20.73■□□□□ 0.91
EXTL3-201ENST00000220562 IFIT3O14879 490 aaKnown RBP20.72■□□□□ 0.91
EXTL3-201ENST00000220562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.72■□□□□ 0.91
EXTL3-201ENST00000220562 GBP3Q9H0R5 595 aa20.72■□□□□ 0.91
EXTL3-201ENST00000220562 IQCA1Q86XH1 822 aa20.72■□□□□ 0.91
EXTL3-201ENST00000220562 MAP3K2Q9Y2U5 619 aa20.72■□□□□ 0.91
EXTL3-201ENST00000220562 LRPPRCP42704 1394 aaKnown RBP20.72■□□□□ 0.91
EXTL3-201ENST00000220562 URI1O94763 535 aaPredicted RBP20.72■□□□□ 0.91
EXTL3-201ENST00000220562 EVI5LQ96CN4 794 aa20.72■□□□□ 0.91
EXTL3-201ENST00000220562 TBC1D2Q9BYX2 928 aa20.72■□□□□ 0.91
EXTL3-201ENST00000220562 MAGI1Q96QZ7 1491 aaPredicted RBP20.72■□□□□ 0.91
EXTL3-201ENST00000220562 TRIM27P14373 513 aa20.72■□□□□ 0.91
EXTL3-201ENST00000220562 TMEM266Q2M3C6 531 aa20.72■□□□□ 0.91
EXTL3-201ENST00000220562 CPLX3Q8WVH0 158 aa20.71■□□□□ 0.91
EXTL3-201ENST00000220562 CCDC113Q9H0I3 377 aa20.71■□□□□ 0.91
EXTL3-201ENST00000220562 KIF4BQ2VIQ3 1234 aa20.71■□□□□ 0.91
EXTL3-201ENST00000220562 DNMBPQ6XZF7 1577 aa20.71■□□□□ 0.91
EXTL3-201ENST00000220562 CTAGE5O15320 804 aa20.71■□□□□ 0.91
EXTL3-201ENST00000220562 TRIM21P19474 475 aaKnown RBP20.71■□□□□ 0.91
EXTL3-201ENST00000220562 CCDC144CPQ8IYA2 1237 aa20.71■□□□□ 0.91
EXTL3-201ENST00000220562 FSIP1Q8NA03 581 aa20.71■□□□□ 0.91
EXTL3-201ENST00000220562 KIF18AQ8NI77 898 aa20.7■□□□□ 0.9
EXTL3-201ENST00000220562 CUL5Q93034 780 aa20.7■□□□□ 0.9
EXTL3-201ENST00000220562 DNA2P51530 1060 aa20.7■□□□□ 0.9
EXTL3-201ENST00000220562 SCLT1Q96NL6 688 aa20.7■□□□□ 0.9
EXTL3-201ENST00000220562 CETN2P41208 172 aa20.7■□□□□ 0.9
EXTL3-201ENST00000220562 A0A087WZG4 1122 aa20.7■□□□□ 0.9
EXTL3-201ENST00000220562 PPP4R3AQ6IN85 833 aa20.7■□□□□ 0.9
EXTL3-201ENST00000220562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.7■□□□□ 0.9
EXTL3-201ENST00000220562 RNF41Q9H4P4 317 aaPredicted RBP20.7■□□□□ 0.9
EXTL3-201ENST00000220562 IQGAP2Q13576 1575 aa20.69■□□□□ 0.9
EXTL3-201ENST00000220562 CHMP4BP1P59074 171 aa20.69■□□□□ 0.9
EXTL3-201ENST00000220562 CATIPQ7Z7H3 387 aa20.69■□□□□ 0.9
EXTL3-201ENST00000220562 GOPCQ9HD26 462 aa20.69■□□□□ 0.9
EXTL3-201ENST00000220562 DBF4Q9UBU7 674 aaPredicted RBP20.69■□□□□ 0.9
EXTL3-201ENST00000220562 CC2D2AQ9P2K1 1620 aa20.69■□□□□ 0.9
EXTL3-201ENST00000220562 DYDC1Q8WWB3 177 aa20.69■□□□□ 0.9
EXTL3-201ENST00000220562 FGFR1OPO95684 399 aaKnown RBP20.69■□□□□ 0.9
EXTL3-201ENST00000220562 FLIIQ13045 1269 aa20.69■□□□□ 0.9
EXTL3-201ENST00000220562 USP25Q9UHP3 1055 aa20.69■□□□□ 0.9
EXTL3-201ENST00000220562 CCDC194A0A1B0GVG4 234 aa20.69■□□□□ 0.9
EXTL3-201ENST00000220562 RAB34Q9BZG1 259 aa20.69■□□□□ 0.9
EXTL3-201ENST00000220562 TRMT1Q9NXH9 659 aaKnown RBP20.69■□□□□ 0.9
EXTL3-201ENST00000220562 GOLIM4O00461 696 aa20.68■□□□□ 0.9
EXTL3-201ENST00000220562 TBC1D9Q6ZT07 1266 aa20.68■□□□□ 0.9
EXTL3-201ENST00000220562 GDPD2Q9HCC8 539 aa20.68■□□□□ 0.9
EXTL3-201ENST00000220562 RPGRQ92834 1020 aaKnown RBP20.68■□□□□ 0.9
EXTL3-201ENST00000220562 GPTP24298 496 aa20.68■□□□□ 0.9
EXTL3-201ENST00000220562 MAP9Q49MG5 647 aa20.68■□□□□ 0.9
EXTL3-201ENST00000220562 VPS36Q86VN1 386 aa20.68■□□□□ 0.9
EXTL3-201ENST00000220562 WASLO00401 505 aaPredicted RBP20.67■□□□□ 0.9
EXTL3-201ENST00000220562 ADGRF5Q8IZF2 1346 aa20.67■□□□□ 0.9
EXTL3-201ENST00000220562 MAP2K1Q02750 393 aaPredicted RBP20.67■□□□□ 0.9
EXTL3-201ENST00000220562 LUZP1Q86V48 1076 aa20.67■□□□□ 0.9
EXTL3-201ENST00000220562 ZBTB3Q9H5J0 574 aa20.67■□□□□ 0.9
EXTL3-201ENST00000220562 RRP9O43818 475 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms