RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 STARD3NLO95772 234 aa35.1■■■■□ 3.21
CHMP4B-201ENST00000217402 TCERG1O14776 1098 aaKnown RBP35.09■■■■□ 3.21
CHMP4B-201ENST00000217402 CYP19A1P11511 503 aaPredicted RBP35.09■■■■□ 3.21
CHMP4B-201ENST00000217402 COL5A3P25940 1745 aaPredicted RBP35.08■■■■□ 3.21
CHMP4B-201ENST00000217402 CT47B1P0C2W7 299 aaPredicted RBP35.06■■■■□ 3.2
CHMP4B-201ENST00000217402 PIP4K2AP48426 406 aaPredicted RBP35.06■■■■□ 3.2
CHMP4B-201ENST00000217402 TAF1LQ8IZX4 1826 aa35.05■■■■□ 3.2
CHMP4B-201ENST00000217402 A1BGP04217 495 aa35.05■■■■□ 3.2
CHMP4B-201ENST00000217402 CRKLP46109 303 aaKnown RBP35.05■■■■□ 3.2
CHMP4B-201ENST00000217402 CCDC30Q5VVM6 783 aa35.04■■■■□ 3.2
CHMP4B-201ENST00000217402 CHPF2Q9P2E5 772 aa35.03■■■■□ 3.2
CHMP4B-201ENST00000217402 BCL2L13Q9BXK5 485 aa35.02■■■■□ 3.2
CHMP4B-201ENST00000217402 CCDC87Q9NVE4 849 aa35.02■■■■□ 3.2
CHMP4B-201ENST00000217402 RREB1Q92766 1687 aa35.02■■■■□ 3.2
CHMP4B-201ENST00000217402 C4BP0C0L5 1744 aa35.02■■■■□ 3.2
CHMP4B-201ENST00000217402 ZBTB1Q9Y2K1 713 aa35.01■■■■□ 3.19
CHMP4B-201ENST00000217402 ANXA1P04083 346 aa35■■■■□ 3.19
CHMP4B-201ENST00000217402 STK31Q9BXU1 1019 aa35■■■■□ 3.19
CHMP4B-201ENST00000217402 CHMP4AQ9BY43 222 aa35■■■■□ 3.19
CHMP4B-201ENST00000217402 CNTNAP4Q9C0A0 1308 aa34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 CANXP27824 592 aaKnown RBP34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 INTS5Q6P9B9 1019 aaKnown RBP34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 ZNF428Q96B54 188 aa34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 NBPF26B4DH59 902 aa34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 MYL6BP14649 208 aa34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 PROSER3Q2NL68 480 aa34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 NBPF14Q5TI25 921 aa34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 NBPF10Q6P3W6 841 aaKnown RBP34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 NBPF15Q8N660 670 aa34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 SSH1Q8WYL5 1049 aa34.99■■■■□ 3.19
CHMP4B-201ENST00000217402 RARSP54136 660 aaKnown RBP34.98■■■■□ 3.19
CHMP4B-201ENST00000217402 DBF4Q9UBU7 674 aaPredicted RBP34.98■■■■□ 3.19
CHMP4B-201ENST00000217402 PDIA6Q15084 440 aa34.97■■■■□ 3.19
CHMP4B-201ENST00000217402 SMC4Q9NTJ3 1288 aa34.97■■■■□ 3.19
CHMP4B-201ENST00000217402 ERBB4Q15303 1308 aa34.96■■■■□ 3.19
CHMP4B-201ENST00000217402 NUP188Q5SRE5 1749 aa34.96■■■■□ 3.19
CHMP4B-201ENST00000217402 AK7Q96M32 723 aa34.96■■■■□ 3.19
CHMP4B-201ENST00000217402 RCAN3Q9UKA8 241 aa34.96■■■■□ 3.19
CHMP4B-201ENST00000217402 ZNF330Q9Y3S2 320 aaPredicted RBP34.96■■■■□ 3.19
CHMP4B-201ENST00000217402 MYH14Q7Z406 1995 aaKnown RBP34.96■■■■□ 3.19
CHMP4B-201ENST00000217402 DDX21Q9NR30 783 aaKnown RBP eCLIP34.95■■■■□ 3.19
CHMP4B-201ENST00000217402 GNPATO15228 680 aa34.95■■■■□ 3.18
CHMP4B-201ENST00000217402 SLC4A2P04920 1241 aa34.95■■■■□ 3.18
CHMP4B-201ENST00000217402 ALDH1L2Q3SY69 923 aa34.95■■■■□ 3.18
CHMP4B-201ENST00000217402 RC3H1Q5TC82 1133 aaKnown RBP34.95■■■■□ 3.18
CHMP4B-201ENST00000217402 HMGB2P26583 209 aaKnown RBP34.93■■■■□ 3.18
CHMP4B-201ENST00000217402 ZNF827Q17R98 1081 aa34.93■■■■□ 3.18
CHMP4B-201ENST00000217402 BCAR3O75815 825 aa34.92■■■■□ 3.18
CHMP4B-201ENST00000217402 MRPL50Q8N5N7 158 aaKnown RBP34.91■■■■□ 3.18
CHMP4B-201ENST00000217402 ANO8Q9HCE9 1232 aaPredicted RBP34.91■■■■□ 3.18
CHMP4B-201ENST00000217402 SMIM5Q71RC9 77 aa34.9■■■■□ 3.18
CHMP4B-201ENST00000217402 IL6STP40189 918 aaPredicted RBP34.89■■■■□ 3.18
CHMP4B-201ENST00000217402 AKT1S1Q96B36 256 aa34.89■■■■□ 3.18
CHMP4B-201ENST00000217402 PHAXQ9H814 394 aaKnown RBP34.89■■■■□ 3.18
CHMP4B-201ENST00000217402 HYPKQ9NX55 129 aa34.89■■■■□ 3.18
CHMP4B-201ENST00000217402 CENPBP07199 599 aaPredicted RBP34.88■■■■□ 3.17
CHMP4B-201ENST00000217402 LRP10Q7Z4F1 713 aa34.88■■■■□ 3.17
CHMP4B-201ENST00000217402 AMIGO3Q86WK7 504 aa34.88■■■■□ 3.17
CHMP4B-201ENST00000217402 RPS6KA4O75676 772 aa34.88■■■■□ 3.17
CHMP4B-201ENST00000217402 PHF14O94880 888 aa34.88■■■■□ 3.17
CHMP4B-201ENST00000217402 G2E3Q7L622 706 aa34.88■■■■□ 3.17
CHMP4B-201ENST00000217402 RTCBQ9Y3I0 505 aaKnown RBP34.88■■■■□ 3.17
CHMP4B-201ENST00000217402 AIMP1Q12904 312 aaKnown RBP34.86■■■■□ 3.17
CHMP4B-201ENST00000217402 NPM2Q86SE8 214 aaKnown RBP34.86■■■■□ 3.17
CHMP4B-201ENST00000217402 TFCP2L1Q9NZI6 479 aa34.86■■■■□ 3.17
CHMP4B-201ENST00000217402 EIF5P55010 431 aaKnown RBP34.85■■■■□ 3.17
CHMP4B-201ENST00000217402 XAGE3Q8WTP9 111 aa34.85■■■■□ 3.17
CHMP4B-201ENST00000217402 STK32BQ9NY57 414 aa34.85■■■■□ 3.17
CHMP4B-201ENST00000217402 COL15A1P39059 1388 aa34.85■■■■□ 3.17
CHMP4B-201ENST00000217402 ARXQ96QS3 562 aa34.84■■■■□ 3.17
CHMP4B-201ENST00000217402 UBR3Q6ZT12 1888 aa34.83■■■■□ 3.17
CHMP4B-201ENST00000217402 FLIIQ13045 1269 aa34.83■■■■□ 3.17
CHMP4B-201ENST00000217402 COPS6Q7L5N1 327 aa34.83■■■■□ 3.17
CHMP4B-201ENST00000217402 SLC15A2Q16348 729 aa34.82■■■■□ 3.16
CHMP4B-201ENST00000217402 TTLL7Q6ZT98 887 aa34.81■■■■□ 3.16
CHMP4B-201ENST00000217402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.81■■■■□ 3.16
CHMP4B-201ENST00000217402 FRAT1Q92837 279 aaPredicted RBP34.81■■■■□ 3.16
CHMP4B-201ENST00000217402 KIF16BQ96L93 1317 aa34.8■■■■□ 3.16
CHMP4B-201ENST00000217402 NOB1Q9ULX3 412 aaKnown RBP34.8■■■■□ 3.16
CHMP4B-201ENST00000217402 TUBGCP6Q96RT7 1819 aa34.8■■■■□ 3.16
CHMP4B-201ENST00000217402 CACNA1FO60840 1977 aa34.79■■■■□ 3.16
CHMP4B-201ENST00000217402 SSFA2P28290 1259 aa34.79■■■■□ 3.16
CHMP4B-201ENST00000217402 BRPF1P55201 1214 aaPredicted RBP34.79■■■■□ 3.16
CHMP4B-201ENST00000217402 FKBP5Q13451 457 aaPredicted RBP34.79■■■■□ 3.16
CHMP4B-201ENST00000217402 TBC1D2BQ9UPU7 963 aa34.79■■■■□ 3.16
CHMP4B-201ENST00000217402 TRAPPC3LQ5T215 181 aa34.78■■■■□ 3.16
CHMP4B-201ENST00000217402 DZIP3Q86Y13 1208 aaKnown RBP34.78■■■■□ 3.16
CHMP4B-201ENST00000217402 KIF6Q6ZMV9 814 aa34.77■■■■□ 3.16
CHMP4B-201ENST00000217402 ARHGEF1Q92888 912 aaKnown RBP34.77■■■■□ 3.16
CHMP4B-201ENST00000217402 A0A087WZG4 1122 aa34.76■■■■□ 3.15
CHMP4B-201ENST00000217402 ADRA2BP18089 450 aa34.76■■■■□ 3.15
CHMP4B-201ENST00000217402 ZBTB3Q9H5J0 574 aa34.75■■■■□ 3.15
CHMP4B-201ENST00000217402 PNPLA7Q6ZV29 1317 aa34.75■■■■□ 3.15
CHMP4B-201ENST00000217402 C4AP0C0L4 1744 aa34.74■■■■□ 3.15
CHMP4B-201ENST00000217402 PTPRCP08575 1304 aa34.74■■■■□ 3.15
CHMP4B-201ENST00000217402 DDX58O95786 925 aaKnown RBP34.73■■■■□ 3.15
CHMP4B-201ENST00000217402 RFC4P35249 363 aa34.73■■■■□ 3.15
CHMP4B-201ENST00000217402 MSH5O43196 834 aa34.73■■■■□ 3.15
CHMP4B-201ENST00000217402 ANKRD13DQ6ZTN6 518 aa34.72■■■■□ 3.15
CHMP4B-201ENST00000217402 SRP68Q9UHB9 627 aaKnown RBP34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms