RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 AMOTQ4VCS5 1084 aa11.68□□□□□ -0.54
CSTF1-201ENST00000217109 BLOC1S2Q6QNY1 142 aa11.68□□□□□ -0.54
CSTF1-201ENST00000217109 SYTL4Q96C24 671 aaPredicted RBP11.68□□□□□ -0.54
CSTF1-201ENST00000217109 CCDC85AQ96PX6 553 aaPredicted RBP11.68□□□□□ -0.54
CSTF1-201ENST00000217109 SBNO1A3KN83 1393 aa11.68□□□□□ -0.54
CSTF1-201ENST00000217109 ATP7BP35670 1465 aa11.68□□□□□ -0.54
CSTF1-201ENST00000217109 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
CSTF1-201ENST00000217109 CABP4P57796 275 aa11.68□□□□□ -0.54
CSTF1-201ENST00000217109 MAP3K5Q99683 1374 aa11.68□□□□□ -0.54
CSTF1-201ENST00000217109 KCNQ3O43525 872 aa11.68□□□□□ -0.54
CSTF1-201ENST00000217109 ZSCAN30Q86W11 494 aa11.68□□□□□ -0.54
CSTF1-201ENST00000217109 GAS2L3Q86XJ1 694 aa11.68□□□□□ -0.54
CSTF1-201ENST00000217109 IQSEC2Q5JU85 1478 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 ATP5J2-PTCD1G3V325 749 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
CSTF1-201ENST00000217109 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.67□□□□□ -0.54
CSTF1-201ENST00000217109 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 USP44Q9H0E7 712 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 TOMM22Q9NS69 142 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 LIMCH1Q9UPQ0 1083 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 TSPOAP1O95153 1857 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 WASHC4Q2M389 1173 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 SOS1Q07889 1333 aaPredicted RBP11.67□□□□□ -0.54
CSTF1-201ENST00000217109 ALKQ9UM73 1620 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 CHRNA2Q15822 529 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 A2ML1A8K2U0 1454 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 KIAA0232Q92628 1395 aa11.67□□□□□ -0.54
CSTF1-201ENST00000217109 SIRT1Q96EB6 747 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 STRN4Q9NRL3 753 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 CCDC39Q9UFE4 941 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 PTPRMP28827 1452 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 RBM10P98175 930 aaKnown RBP11.66□□□□□ -0.54
CSTF1-201ENST00000217109 KRT28Q7Z3Y7 464 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 NECAB1Q8N987 351 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 GOLGA6L6A8MZA4 724 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 HIP1O00291 1037 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 APPP05067 770 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 SPC24Q8NBT2 197 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 DDX11Q96FC9 970 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 PALD1Q9ULE6 856 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 NEXMIFQ5QGS0 1516 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 VWDEQ8N2E2 1590 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 KDM4AO75164 1064 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 GCP02774 474 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 MROH2AA6NES4 1674 aa11.66□□□□□ -0.54
CSTF1-201ENST00000217109 LRRC7Q96NW7 1537 aa11.65□□□□□ -0.54
CSTF1-201ENST00000217109 PPFIA3O75145 1194 aa11.65□□□□□ -0.54
CSTF1-201ENST00000217109 LARP1Q6PKG0 1096 aaKnown RBP11.65□□□□□ -0.54
CSTF1-201ENST00000217109 ORAI2Q96SN7 254 aa11.65□□□□□ -0.54
CSTF1-201ENST00000217109 KIF3AQ9Y496 699 aa11.65□□□□□ -0.54
CSTF1-201ENST00000217109 KIAA1210Q9ULL0 1709 aa11.65□□□□□ -0.54
CSTF1-201ENST00000217109 BCL11BQ9C0K0 894 aaPredicted RBP11.65□□□□□ -0.54
CSTF1-201ENST00000217109 HYPKQ9NX55 129 aa11.65□□□□□ -0.54
CSTF1-201ENST00000217109 BECN2A8MW95 431 aa11.65□□□□□ -0.55
CSTF1-201ENST00000217109 PDCP20941 246 aa11.65□□□□□ -0.55
CSTF1-201ENST00000217109 TOM1L2Q6ZVM7 507 aa11.65□□□□□ -0.55
CSTF1-201ENST00000217109 UBE3BQ7Z3V4 1068 aa11.65□□□□□ -0.55
CSTF1-201ENST00000217109 IP6K1Q92551 441 aa11.65□□□□□ -0.55
CSTF1-201ENST00000217109 STX6O43752 255 aa11.64□□□□□ -0.55
CSTF1-201ENST00000217109 AKAP4Q5JQC9 854 aa11.64□□□□□ -0.55
CSTF1-201ENST00000217109 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
CSTF1-201ENST00000217109 GOLGA6L19H0YKK7 550 aa11.64□□□□□ -0.55
CSTF1-201ENST00000217109 CAMK4Q16566 473 aa11.64□□□□□ -0.55
CSTF1-201ENST00000217109 COPS6Q7L5N1 327 aa11.64□□□□□ -0.55
CSTF1-201ENST00000217109 ARHGEF40Q8TER5 1519 aa11.64□□□□□ -0.55
CSTF1-201ENST00000217109 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
CSTF1-201ENST00000217109 PTCH1Q13635 1447 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 A0A087WZG4 1122 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 GJB2P29033 226 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 CLCN1P35523 988 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 KRT85P78386 507 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 KLHDC4Q8TBB5 520 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 CPLX1O14810 134 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 NPHP1O15259 732 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 ANAPC15P60006 121 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 FKBP4Q02790 459 aaKnown RBP eCLIP11.63□□□□□ -0.55
CSTF1-201ENST00000217109 SASS6Q6UVJ0 657 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 KSR2Q6VAB6 950 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 USP48Q86UV5 1035 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 XAGE3Q8WTP9 111 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 TFIP11Q9UBB9 837 aaKnown RBP11.63□□□□□ -0.55
CSTF1-201ENST00000217109 USP25Q9UHP3 1055 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 CNPY2Q9Y2B0 182 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 CDK12Q9NYV4 1490 aaPredicted RBP11.63□□□□□ -0.55
CSTF1-201ENST00000217109 GRM8O00222 908 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 AK2P54819 239 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 VSIG10Q8N0Z9 540 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 NFATC2IPQ8NCF5 419 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 PRDM11Q9NQV5 511 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 EVI5LQ96CN4 794 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 KIF2CQ99661 725 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 DEPDC5O75140 1603 aa11.63□□□□□ -0.55
CSTF1-201ENST00000217109 USP6P35125 1406 aa11.62□□□□□ -0.55
CSTF1-201ENST00000217109 FAM177BA6PVY3 158 aa11.62□□□□□ -0.55
CSTF1-201ENST00000217109 ZSCAN31Q96LW9 406 aaPredicted RBP11.62□□□□□ -0.55
CSTF1-201ENST00000217109 LMBRD1Q9NUN5 540 aa11.62□□□□□ -0.55
CSTF1-201ENST00000217109 RBSNQ9H1K0 784 aa11.62□□□□□ -0.55
CSTF1-201ENST00000217109 CAMSAP1Q5T5Y3 1602 aa11.62□□□□□ -0.55
CSTF1-201ENST00000217109 MROH1Q8NDA8 1641 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms