RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CCDC87Q9NVE4 849 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 AEBP1Q8IUX7 1158 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 TRIM22Q8IYM9 498 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 H0YIN7 160 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 HLA-DOAP06340 250 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 PICALMQ13492 652 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 GSE1Q14687 1217 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
SIX4-201ENST00000216513 ATP7AQ04656 1500 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 COPS6Q7L5N1 327 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 BOLA2Q9H3K6 86 aa16.34■□□□□ 0.21
SIX4-201ENST00000216513 RANBP6O60518 1105 aaKnown RBP16.33■□□□□ 0.21
SIX4-201ENST00000216513 TTLL5Q6EMB2 1281 aa16.33■□□□□ 0.21
SIX4-201ENST00000216513 CWC27Q6UX04 472 aaKnown RBP16.33■□□□□ 0.21
SIX4-201ENST00000216513 ANKRD20A12PQ8NF67 263 aa16.33■□□□□ 0.21
SIX4-201ENST00000216513 RBM17Q96I25 401 aaKnown RBP16.33■□□□□ 0.21
SIX4-201ENST00000216513 NEO1Q92859 1461 aa16.33■□□□□ 0.2
SIX4-201ENST00000216513 LDHCP07864 332 aa16.33■□□□□ 0.2
SIX4-201ENST00000216513 TPM1P09493 284 aa16.32■□□□□ 0.2
SIX4-201ENST00000216513 GOLGA6L19H0YKK7 550 aa16.32■□□□□ 0.2
SIX4-201ENST00000216513 SNRKQ9NRH2 765 aa16.32■□□□□ 0.2
SIX4-201ENST00000216513 CT47A1Q5JQC4 288 aaPredicted RBP16.32■□□□□ 0.2
SIX4-201ENST00000216513 CHPF2Q9P2E5 772 aa16.32■□□□□ 0.2
SIX4-201ENST00000216513 PI4KAP2A4QPH2 592 aa16.32■□□□□ 0.2
SIX4-201ENST00000216513 BAG3O95817 575 aa16.32■□□□□ 0.2
SIX4-201ENST00000216513 EIF6P56537 245 aaKnown RBP16.32■□□□□ 0.2
SIX4-201ENST00000216513 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
SIX4-201ENST00000216513 PI4KAP1Q8N8J0 262 aa16.32■□□□□ 0.2
SIX4-201ENST00000216513 NAPBQ9H115 298 aa16.32■□□□□ 0.2
SIX4-201ENST00000216513 ABCC1P33527 1531 aa16.32■□□□□ 0.2
SIX4-201ENST00000216513 HOXC9P31274 260 aa16.32■□□□□ 0.2
SIX4-201ENST00000216513 DCAF5Q96JK2 942 aa16.31■□□□□ 0.2
SIX4-201ENST00000216513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.2
SIX4-201ENST00000216513 ZFYVE27Q5T4F4 411 aa16.31■□□□□ 0.2
SIX4-201ENST00000216513 SEC63Q9UGP8 760 aaKnown RBP16.31■□□□□ 0.2
SIX4-201ENST00000216513 NPHP4O75161 1426 aaPredicted RBP16.31■□□□□ 0.2
SIX4-201ENST00000216513 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
SIX4-201ENST00000216513 SSBP05455 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
SIX4-201ENST00000216513 C22orf23Q9BZE7 217 aa16.31■□□□□ 0.2
SIX4-201ENST00000216513 TMEM2Q9UHN6 1383 aa16.31■□□□□ 0.2
SIX4-201ENST00000216513 FLIIQ13045 1269 aa16.31■□□□□ 0.2
SIX4-201ENST00000216513 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
SIX4-201ENST00000216513 CA8P35219 290 aa16.3■□□□□ 0.2
SIX4-201ENST00000216513 SPTY2D1Q68D10 685 aaPredicted RBP16.3■□□□□ 0.2
SIX4-201ENST00000216513 ZNF804AQ7Z570 1209 aa16.3■□□□□ 0.2
SIX4-201ENST00000216513 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
SIX4-201ENST00000216513 JAG2Q9Y219 1238 aa16.3■□□□□ 0.2
SIX4-201ENST00000216513 IP6K1Q92551 441 aa16.3■□□□□ 0.2
SIX4-201ENST00000216513 GCC1Q96CN9 775 aa16.3■□□□□ 0.2
SIX4-201ENST00000216513 EYA3Q99504 573 aa16.3■□□□□ 0.2
SIX4-201ENST00000216513 ODF2Q5BJF6 829 aa16.3■□□□□ 0.2
SIX4-201ENST00000216513 YTHDC2Q9H6S0 1430 aaKnown RBP16.29■□□□□ 0.2
SIX4-201ENST00000216513 TRMT1LQ7Z2T5 733 aaKnown RBP16.29■□□□□ 0.2
SIX4-201ENST00000216513 KRT27Q7Z3Y8 459 aa16.29■□□□□ 0.2
SIX4-201ENST00000216513 TXLNAP40222 546 aa16.29■□□□□ 0.2
SIX4-201ENST00000216513 IMMTQ16891 758 aaKnown RBP16.29■□□□□ 0.2
SIX4-201ENST00000216513 PRKG1Q13976 671 aa16.29■□□□□ 0.2
SIX4-201ENST00000216513 LARGE2Q8N3Y3 721 aa16.29■□□□□ 0.2
SIX4-201ENST00000216513 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
SIX4-201ENST00000216513 CFAP65Q6ZU64 1925 aaKnown RBP16.28■□□□□ 0.2
SIX4-201ENST00000216513 KDM6BO15054 1643 aa16.28■□□□□ 0.2
SIX4-201ENST00000216513 PLS1Q14651 629 aa16.28■□□□□ 0.2
SIX4-201ENST00000216513 TNIP1Q15025 636 aa16.28■□□□□ 0.2
SIX4-201ENST00000216513 PDZRN3Q9UPQ7 1066 aa16.28■□□□□ 0.2
SIX4-201ENST00000216513 FLT4P35916 1363 aa16.28■□□□□ 0.2
SIX4-201ENST00000216513 ANKRD36BQ8N2N9 1353 aa16.28■□□□□ 0.2
SIX4-201ENST00000216513 TMEM57Q8N5G2 664 aa16.27■□□□□ 0.2
SIX4-201ENST00000216513 CERKQ8TCT0 537 aa16.27■□□□□ 0.2
SIX4-201ENST00000216513 CHD1O14646 1710 aa16.27■□□□□ 0.2
SIX4-201ENST00000216513 DDX11L8A8MPP1 907 aa16.27■□□□□ 0.2
SIX4-201ENST00000216513 CT47B1P0C2W7 299 aaPredicted RBP16.27■□□□□ 0.2
SIX4-201ENST00000216513 ABCA5Q8WWZ7 1642 aa16.27■□□□□ 0.19
SIX4-201ENST00000216513 CUL5Q93034 780 aa16.27■□□□□ 0.19
SIX4-201ENST00000216513 GSTO1P78417 241 aa16.26■□□□□ 0.19
SIX4-201ENST00000216513 SKIDA1Q1XH10 827 aa16.26■□□□□ 0.19
SIX4-201ENST00000216513 MTHFSDQ2M296 383 aaKnown RBP16.26■□□□□ 0.19
SIX4-201ENST00000216513 CCDC73Q6ZRK6 1079 aa16.26■□□□□ 0.19
SIX4-201ENST00000216513 KIF1BPQ96EK5 621 aa16.26■□□□□ 0.19
SIX4-201ENST00000216513 SMARCA5O60264 1052 aaPredicted RBP16.26■□□□□ 0.19
SIX4-201ENST00000216513 NSD2O96028 1365 aa16.26■□□□□ 0.19
SIX4-201ENST00000216513 EYA1Q99502 592 aa16.26■□□□□ 0.19
SIX4-201ENST00000216513 FAM13BQ9NYF5 915 aa16.25■□□□□ 0.19
SIX4-201ENST00000216513 MVPQ14764 893 aaKnown RBP16.25■□□□□ 0.19
SIX4-201ENST00000216513 IRS4O14654 1257 aaPredicted RBP16.25■□□□□ 0.19
SIX4-201ENST00000216513 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
SIX4-201ENST00000216513 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
SIX4-201ENST00000216513 NEK4P51957 841 aa16.24■□□□□ 0.19
SIX4-201ENST00000216513 DPY19L2Q6NUT2 758 aa16.24■□□□□ 0.19
SIX4-201ENST00000216513 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
SIX4-201ENST00000216513 CYP46A1Q9Y6A2 500 aa16.24■□□□□ 0.19
SIX4-201ENST00000216513 NFKBIBQ15653 356 aa16.24■□□□□ 0.19
SIX4-201ENST00000216513 LARP6Q9BRS8 491 aaKnown RBP16.23■□□□□ 0.19
SIX4-201ENST00000216513 MAP3K19Q56UN5 1328 aa16.23■□□□□ 0.19
SIX4-201ENST00000216513 CFAP74Q9C0B2 1584 aa16.23■□□□□ 0.19
SIX4-201ENST00000216513 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.23■□□□□ 0.19
SIX4-201ENST00000216513 FAM196AQ6ZSG2 479 aa16.23■□□□□ 0.19
SIX4-201ENST00000216513 GOLIM4O00461 696 aa16.23■□□□□ 0.19
SIX4-201ENST00000216513 AAMPQ13685 434 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms