RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 PALLDQ8WX93 1383 aa21.18■□□□□ 0.98
POLR2E-201ENST00000215587 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
POLR2E-201ENST00000215587 PRAMEF22A3QJZ6 481 aa21.17■□□□□ 0.98
POLR2E-201ENST00000215587 SLC4A2P04920 1241 aa21.17■□□□□ 0.98
POLR2E-201ENST00000215587 MS4A1P11836 297 aa21.17■□□□□ 0.98
POLR2E-201ENST00000215587 NOB1Q9ULX3 412 aaKnown RBP21.17■□□□□ 0.98
POLR2E-201ENST00000215587 TNS1Q9HBL0 1735 aaKnown RBP21.17■□□□□ 0.98
POLR2E-201ENST00000215587 IRX6P78412 446 aaPredicted RBP21.16■□□□□ 0.98
POLR2E-201ENST00000215587 BCL11BQ9C0K0 894 aaPredicted RBP21.16■□□□□ 0.98
POLR2E-201ENST00000215587 CHPF2Q9P2E5 772 aa21.16■□□□□ 0.98
POLR2E-201ENST00000215587 DBF4Q9UBU7 674 aaPredicted RBP21.16■□□□□ 0.98
POLR2E-201ENST00000215587 BTAF1O14981 1849 aa21.14■□□□□ 0.97
POLR2E-201ENST00000215587 SBF2Q86WG5 1849 aa21.14■□□□□ 0.97
POLR2E-201ENST00000215587 ATF7IPQ6VMQ6 1270 aa21.14■□□□□ 0.97
POLR2E-201ENST00000215587 ARHGAP45Q92619 1136 aa21.14■□□□□ 0.97
POLR2E-201ENST00000215587 USP16Q9Y5T5 823 aa21.14■□□□□ 0.97
POLR2E-201ENST00000215587 PTPRCP08575 1304 aa21.13■□□□□ 0.97
POLR2E-201ENST00000215587 ERBB4Q15303 1308 aa21.13■□□□□ 0.97
POLR2E-201ENST00000215587 FKBP8Q14318 412 aa21.13■□□□□ 0.97
POLR2E-201ENST00000215587 PDE3AQ14432 1141 aa21.13■□□□□ 0.97
POLR2E-201ENST00000215587 EZH2Q15910 746 aaKnown RBP21.13■□□□□ 0.97
POLR2E-201ENST00000215587 FTSJ3Q8IY81 847 aaKnown RBP21.13■□□□□ 0.97
POLR2E-201ENST00000215587 API5Q9BZZ5 524 aaKnown RBP21.13■□□□□ 0.97
POLR2E-201ENST00000215587 LOC102724428A0A0B4J2F2 783 aa21.12■□□□□ 0.97
POLR2E-201ENST00000215587 STARD3NLO95772 234 aa21.12■□□□□ 0.97
POLR2E-201ENST00000215587 SIK1P57059 783 aa21.12■□□□□ 0.97
POLR2E-201ENST00000215587 PTF1AQ7RTS3 328 aa21.12■□□□□ 0.97
POLR2E-201ENST00000215587 DNAJC10Q8IXB1 793 aa21.12■□□□□ 0.97
POLR2E-201ENST00000215587 DDX21Q9NR30 783 aaKnown RBP eCLIP21.12■□□□□ 0.97
POLR2E-201ENST00000215587 HYPKQ9NX55 129 aa21.12■□□□□ 0.97
POLR2E-201ENST00000215587 TRIM27P14373 513 aa21.11■□□□□ 0.97
POLR2E-201ENST00000215587 FLIIQ13045 1269 aa21.11■□□□□ 0.97
POLR2E-201ENST00000215587 DZIP1LQ8IYY4 767 aaKnown RBP21.11■□□□□ 0.97
POLR2E-201ENST00000215587 C20orf194Q5TEA3 1177 aa21.1■□□□□ 0.97
POLR2E-201ENST00000215587 CAMKK2Q96RR4 588 aa21.1■□□□□ 0.97
POLR2E-201ENST00000215587 GTF3C3Q9Y5Q9 886 aa21.1■□□□□ 0.97
POLR2E-201ENST00000215587 CICQ96RK0 1608 aaPredicted RBP21.09■□□□□ 0.97
POLR2E-201ENST00000215587 TRIM37O94972 964 aa21.09■□□□□ 0.97
POLR2E-201ENST00000215587 ATP6V1AP38606 617 aa21.09■□□□□ 0.97
POLR2E-201ENST00000215587 G2E3Q7L622 706 aa21.09■□□□□ 0.97
POLR2E-201ENST00000215587 CLUAP1Q96AJ1 413 aa21.09■□□□□ 0.97
POLR2E-201ENST00000215587 SLC4A9Q96Q91 983 aa21.09■□□□□ 0.97
POLR2E-201ENST00000215587 CACNA1FO60840 1977 aa21.08■□□□□ 0.97
POLR2E-201ENST00000215587 DCAF8L1A6NGE4 600 aa21.08■□□□□ 0.97
POLR2E-201ENST00000215587 ANXA1P04083 346 aa21.08■□□□□ 0.97
POLR2E-201ENST00000215587 TJP1Q07157 1748 aa21.08■□□□□ 0.97
POLR2E-201ENST00000215587 FKBP5Q13451 457 aaPredicted RBP21.08■□□□□ 0.97
POLR2E-201ENST00000215587 PROSER3Q2NL68 480 aa21.08■□□□□ 0.97
POLR2E-201ENST00000215587 ZNF831Q5JPB2 1677 aa21.08■□□□□ 0.96
POLR2E-201ENST00000215587 MYL6BP14649 208 aa21.07■□□□□ 0.96
POLR2E-201ENST00000215587 PDIA6Q15084 440 aa21.07■□□□□ 0.96
POLR2E-201ENST00000215587 PANK1Q8TE04 598 aa21.07■□□□□ 0.96
POLR2E-201ENST00000215587 PHAXQ9H814 394 aaKnown RBP21.07■□□□□ 0.96
POLR2E-201ENST00000215587 TNNQ9UQP3 1299 aa21.07■□□□□ 0.96
POLR2E-201ENST00000215587 CYP19A1P11511 503 aaPredicted RBP21.06■□□□□ 0.96
POLR2E-201ENST00000215587 ERICH6BQ5W0A0 696 aa21.06■□□□□ 0.96
POLR2E-201ENST00000215587 ABCC4O15439 1325 aa21.05■□□□□ 0.96
POLR2E-201ENST00000215587 DDX58O95786 925 aaKnown RBP21.05■□□□□ 0.96
POLR2E-201ENST00000215587 A1BGP04217 495 aa21.05■□□□□ 0.96
POLR2E-201ENST00000215587 RLBP1P12271 317 aa21.05■□□□□ 0.96
POLR2E-201ENST00000215587 CRBNQ96SW2 442 aa21.05■□□□□ 0.96
POLR2E-201ENST00000215587 PIP4K2AP48426 406 aaPredicted RBP21.04■□□□□ 0.96
POLR2E-201ENST00000215587 ITPK1Q13572 414 aa21.04■□□□□ 0.96
POLR2E-201ENST00000215587 CCNL1Q9UK58 526 aaPredicted RBP21.04■□□□□ 0.96
POLR2E-201ENST00000215587 RREB1Q92766 1687 aa21.03■□□□□ 0.96
POLR2E-201ENST00000215587 NBPF26B4DH59 902 aa21.03■□□□□ 0.96
POLR2E-201ENST00000215587 NBPF14Q5TI25 921 aa21.03■□□□□ 0.96
POLR2E-201ENST00000215587 NBPF10Q6P3W6 841 aaKnown RBP21.03■□□□□ 0.96
POLR2E-201ENST00000215587 NBPF15Q8N660 670 aa21.03■□□□□ 0.96
POLR2E-201ENST00000215587 XAGE3Q8WTP9 111 aa21.03■□□□□ 0.96
POLR2E-201ENST00000215587 CCDC87Q9NVE4 849 aa21.03■□□□□ 0.96
POLR2E-201ENST00000215587 PPP1R1BQ9UD71 204 aaPredicted RBP21.03■□□□□ 0.96
POLR2E-201ENST00000215587 COG6Q9Y2V7 657 aa21.03■□□□□ 0.96
POLR2E-201ENST00000215587 LY75O60449 1722 aa21.02■□□□□ 0.96
POLR2E-201ENST00000215587 AIMP1Q12904 312 aaKnown RBP21.02■□□□□ 0.96
POLR2E-201ENST00000215587 ITPRIPQ8IWB1 547 aa21.02■□□□□ 0.96
POLR2E-201ENST00000215587 TMEM57Q8N5G2 664 aa21.02■□□□□ 0.96
POLR2E-201ENST00000215587 EXOC6Q8TAG9 804 aa21.02■□□□□ 0.96
POLR2E-201ENST00000215587 APBA3O96018 575 aa21.01■□□□□ 0.95
POLR2E-201ENST00000215587 CRKLP46109 303 aaKnown RBP21.01■□□□□ 0.95
POLR2E-201ENST00000215587 MVPQ14764 893 aaKnown RBP21.01■□□□□ 0.95
POLR2E-201ENST00000215587 LRP10Q7Z4F1 713 aa21.01■□□□□ 0.95
POLR2E-201ENST00000215587 NPM2Q86SE8 214 aaKnown RBP21.01■□□□□ 0.95
POLR2E-201ENST00000215587 SPON1Q9HCB6 807 aa21.01■□□□□ 0.95
POLR2E-201ENST00000215587 PXDNLA1KZ92 1463 aa21.01■□□□□ 0.95
POLR2E-201ENST00000215587 F6X3S4 739 aa21■□□□□ 0.95
POLR2E-201ENST00000215587 SLC4A10Q6U841 1118 aa21■□□□□ 0.95
POLR2E-201ENST00000215587 COPS6Q7L5N1 327 aa21■□□□□ 0.95
POLR2E-201ENST00000215587 ZNF330Q9Y3S2 320 aaPredicted RBP21■□□□□ 0.95
POLR2E-201ENST00000215587 NUP188Q5SRE5 1749 aa21■□□□□ 0.95
POLR2E-201ENST00000215587 COL5A3P25940 1745 aaPredicted RBP20.99■□□□□ 0.95
POLR2E-201ENST00000215587 PI4KAP2A4QPH2 592 aa20.99■□□□□ 0.95
POLR2E-201ENST00000215587 HMGB2P26583 209 aaKnown RBP20.99■□□□□ 0.95
POLR2E-201ENST00000215587 CCT4P50991 539 aaKnown RBP20.99■□□□□ 0.95
POLR2E-201ENST00000215587 SLC27A3Q5K4L6 730 aa20.99■□□□□ 0.95
POLR2E-201ENST00000215587 KSR2Q6VAB6 950 aa20.99■□□□□ 0.95
POLR2E-201ENST00000215587 PI4KAP1Q8N8J0 262 aa20.99■□□□□ 0.95
POLR2E-201ENST00000215587 LINC00116Q8NCU8 138 aa20.99■□□□□ 0.95
POLR2E-201ENST00000215587 DDX19BQ9UMR2 479 aa20.99■□□□□ 0.95
POLR2E-201ENST00000215587 ZBTB1Q9Y2K1 713 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms