RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Brinp3Q499E0 766 aa16.36■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 EngaseQ8BX80 734 aa16.36■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Map3k2Q61083 619 aa16.36■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 RgmbQ7TQ33 436 aa16.36■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Mphosph10Q810V0 681 aaKnown RBP16.36■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Mrps27Q8BK72 415 aaKnown RBP16.36■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 GorabQ8BRM2 368 aa16.36■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Antxr1Q9CZ52 562 aa16.36■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Q9D2X8 372 aa16.36■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Shank2Q80Z38 1476 aa16.35■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Exoc6bA6H5Z3 810 aa16.35■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 ArxO35085 564 aa16.35■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Ddx17Q501J6 650 aaKnown RBP16.35■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Pde3bQ61409 1100 aa16.35■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 RestQ8VIG1 1082 aa16.35■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 VgfQ0VGU4 617 aa16.34■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Ccdc155Q80VJ8 648 aa16.34■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Pdia6Q922R8 440 aaKnown RBP16.34■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Asic4Q7TNS7 539 aa16.33■□□□□ 0.21
Pdlim5-208ENSMUST00000196220 Zpr1Q62384 459 aa16.33■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Irx6Q9ER75 438 aa16.33■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Abcc4E9Q236 1325 aa16.32■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Erbb4Q61527 1308 aa16.32■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Anapc15P60007 132 aa16.32■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 MccE9PWI3 1003 aa16.31■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Grm8P47743 908 aa16.31■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Cers3Q1A3B0 383 aa16.31■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Ppm1mQ8BU27 406 aa16.31■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Hmox1P14901 289 aa16.31■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Tlr7P58681 1050 aa16.3■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Pip4k2bQ80XI4 416 aa16.3■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Tjp1P39447 1745 aaKnown RBP16.3■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Kiaa0232Q80U59 1396 aaKnown RBP16.29■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Casq1O09165 405 aa16.29■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Flad1Q8R123 492 aa16.29■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Bicc1Q99MQ1 977 aaKnown RBP16.29■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Fam50bQ9WTJ8 334 aa16.29■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Slc4a10Q5DTL9 1118 aa16.28■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Ankle2Q6P1H6 964 aa16.28■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Slc5a1Q8C3K6 665 aa16.28■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 PtmsQ9D0J8 101 aaKnown RBP16.28■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Cdhr2E9Q7P9 1308 aa16.28■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Ddx60E9PZQ1 1711 aa16.28■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Tpx2A2APB8 745 aaKnown RBP16.28■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Bcl2l13P59017 434 aa16.28■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 Cnnm1Q0GA42 951 aa16.28■□□□□ 0.2
Pdlim5-208ENSMUST00000196220 AnlnQ8K298 1121 aaKnown RBP16.27■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Rfx1P48377 963 aa16.26■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Tgfb1i1Q62219 461 aa16.26■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 4933402E13RikQ9D4D2 429 aa16.26■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 LlphQ9D945 130 aaKnown RBP16.26■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Cyp27a1Q9DBG1 533 aa16.26■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Zfp142G5E869 1843 aa16.26■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Pard3Q99NH2 1333 aa16.26■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Gm21663A0A0G2JE01 267 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Zkscan16A2ALW2 728 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Gm7361D3Z6R1 267 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 5031410I06RikE9Q4E0 267 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Gm1979E9QAN3 267 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Gm5862K7N5V5 267 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Gm10220K7N660 267 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Ddx58Q6Q899 926 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Trim52Q8CDV4 233 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Nsfl1cQ9CZ44 370 aaKnown RBP16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Speer4bQ9D9F7 267 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Brpf1B2RRD7 1212 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Hsp90b1P08113 802 aaKnown RBP16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Map3k13Q1HKZ5 959 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Efcab2Q9CQ46 164 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Txnrd1Q9JMH6 613 aa16.25■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 AceP09470 1312 aa16.24■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Unc5clQ6R653 518 aa16.24■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Lmbr1lQ9D1E5 489 aa16.24■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Tbc1d4Q8BYJ6 1307 aa16.24■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Marf1Q8BJ34 1730 aaKnown RBP16.24■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Smarce1O54941 411 aaKnown RBP16.23■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Atp6v1dP57746 247 aa16.23■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Prkab2Q6PAM0 271 aa16.23■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Zkscan1Q8BGS3 561 aaKnown RBP16.23■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Zbtb3Q91X45 518 aa16.23■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 4933416C03RikQ3V063 378 aa16.22■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Nlrp9bQ66X22 1003 aa16.22■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Tiam2Q6ZPF3 1715 aa16.22■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Tmem87bQ8BKU8 555 aa16.22■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 MypnQ5DTJ9 1315 aa16.22■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Larp1Q6ZQ58 1072 aaKnown RBP16.21■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Ripor2Q80U16 1078 aa16.21■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Prune1Q8BIW1 454 aa16.21■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Sf3a1Q8K4Z5 791 aaKnown RBP16.21■□□□□ 0.19
Pdlim5-208ENSMUST00000196220 Gm21680A0A0G2JGR8 267 aa16.2■□□□□ 0.18
Pdlim5-208ENSMUST00000196220 Ddit3P35639 168 aa16.2■□□□□ 0.18
Pdlim5-208ENSMUST00000196220 Zbtb40Q6PCS8 1258 aa16.2■□□□□ 0.18
Pdlim5-208ENSMUST00000196220 Mylk2Q8VCR8 613 aa16.2■□□□□ 0.18
Pdlim5-208ENSMUST00000196220 Taf5lQ91WQ5 589 aa16.2■□□□□ 0.18
Pdlim5-208ENSMUST00000196220 PigbQ9JJQ0 542 aa16.2■□□□□ 0.18
Pdlim5-208ENSMUST00000196220 Rad50P70388 1312 aa16.19■□□□□ 0.18
Pdlim5-208ENSMUST00000196220 InsrrQ9WTL4 1300 aa16.19■□□□□ 0.18
Pdlim5-208ENSMUST00000196220 Isy1Q69ZQ2 285 aaKnown RBP16.19■□□□□ 0.18
Pdlim5-208ENSMUST00000196220 Ssh1Q76I79 1042 aa16.19■□□□□ 0.18
Pdlim5-208ENSMUST00000196220 Rhot2Q8JZN7 620 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms