RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Clcn1Q64347 994 aa12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Gtf3c5Q8R2T8 520 aa12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Stk3Q9JI10 497 aa12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Cdhr2E9Q7P9 1308 aa12.06□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Mcmdc2E9Q956 681 aa12.05□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Ppip5k2Q6ZQB6 1129 aa12.05□□□□□ -0.48
Rnf41-202ENSMUST00000171342 CenppQ9CZ92 286 aa12.05□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Brpf1B2RRD7 1212 aa12.05□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Igfbp6P47880 238 aa12.05□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Adgrb1Q3UHD1 1582 aa12.05□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Tgfb1i1Q62219 461 aa12.05□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Phlpp1Q8CHE4 1687 aa12.04□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Prune1Q8BIW1 454 aa12.04□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Tmem119Q8R138 280 aa12.04□□□□□ -0.48
Rnf41-202ENSMUST00000171342 ApobrQ8VBT6 942 aa12.04□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Chmp4cQ9D7F7 232 aa12.04□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Arfgef2A2A5R2 1792 aa12.04□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Flad1Q8R123 492 aa12.04□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Unc13bQ9Z1N9 1602 aa12.04□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Iqsec3Q3TES0 1195 aa12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Pdia6Q922R8 440 aaKnown RBP12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Adcy9P51830 1353 aa12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Spryd3E9Q9B3 442 aa12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Grm8P47743 908 aa12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Ccnl1Q52KE7 532 aaKnown RBP12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Smg7Q5RJH6 1138 aaKnown RBP12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Htatsf1Q8BGC0 757 aa12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Ppp6r3Q922D4 844 aa12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Kif2cQ922S8 721 aa12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Trpm3Q5F4S9 1721 aa12.03□□□□□ -0.48
Rnf41-202ENSMUST00000171342 AppP12023 770 aa12.02□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Zbtb45Q52KG4 520 aa12.02□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Atg3Q9CPX6 314 aa12.02□□□□□ -0.48
Rnf41-202ENSMUST00000171342 Nucb1Q02819 459 aaKnown RBP12.02□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Catsper2A2ARP9 588 aa12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Edc3Q8K2D3 508 aaKnown RBP12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 RestQ8VIG1 1082 aa12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Anapc15-psA0A140T8L6 141 aa12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Tpx2A2APB8 745 aaKnown RBP12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Neurod6P48986 337 aa12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Soga3Q6NZL0 945 aa12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Erc2Q6PH08 957 aa12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Eif3aP23116 1344 aaKnown RBP12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 NmiO35309 314 aa12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Col18a1P39061 1774 aa12.01□□□□□ -0.49
Rnf41-202ENSMUST00000171342 ScaperF8VQ70 1398 aaKnown RBP12□□□□□ -0.49
Rnf41-202ENSMUST00000171342 GpkowQ56A08 488 aa12□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Fkbp5Q64378 456 aa12□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Gm10093D3YYI8 482 aa12□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Hdac1O09106 482 aaKnown RBP12□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Q8C5K5 320 aa12□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Chmp3Q9CQ10 224 aa12□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Terf2O35144 541 aa11.99□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Ltbp4Q8K4G1 1666 aa11.99□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Pard3Q99NH2 1333 aa11.99□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Plcb2A3KGF7 1181 aa11.99□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Ets1P27577 440 aa11.99□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Ssfa2Q922B9 1252 aa11.99□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Elp1Q7TT37 1333 aaKnown RBP11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Ankle2Q6P1H6 964 aa11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Tshz3Q8CGV9 1081 aa11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Ints5Q8CHT3 1018 aa11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Phactr2B1AVP0 632 aa11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Qtrt2B8ZXI1 415 aa11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Cct4P80315 539 aaKnown RBP11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 BcanQ61361 883 aa11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Mum1Q6DID5 682 aa11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Brf1Q8CFK2 676 aa11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Zbtb3Q91X45 518 aa11.98□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Tet3Q8BG87 1668 aa11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 HellsQ60848 821 aa11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Ankib1Q6ZPS6 1085 aa11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Nsfl1cQ9CZ44 370 aaKnown RBP11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Robo1O89026 1612 aa11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 MccE9PWI3 1003 aa11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 DekQ7TNV0 380 aaKnown RBP11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Jakmip1Q8BVL9 626 aa11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Slc26a8Q8R0C3 999 aa11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Cap2Q9CYT6 476 aa11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Zeb2Q9R0G7 1215 aa11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Brwd3A2AHJ4 1799 aa11.97□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Vsig10D3YX43 558 aa11.96□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Igflr1Q3U4N7 345 aa11.96□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Flt4P35917 1363 aa11.96□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Adam1aQ60813 791 aa11.96□□□□□ -0.49
Rnf41-202ENSMUST00000171342 Pknox2Q8BG99 474 aa11.96□□□□□ -0.49
Rnf41-202ENSMUST00000171342 AceP09470 1312 aa11.96□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Atp10bB1AWN4 1474 aa11.96□□□□□ -0.5
Rnf41-202ENSMUST00000171342 1700010I14RikQ7TPG0 532 aa11.96□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Adora1Q60612 326 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Ddx58Q6Q899 926 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Slx1bQ8BX32 270 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Ttc19Q8CC21 365 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Stard3nlQ9DCI3 235 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 LratQ9JI60 231 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Tom1O88746 492 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 VgfQ0VGU4 617 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Exoc5Q3TPX4 708 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Ppm1mQ8BU27 406 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Syde2E9PUP1 1314 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 203.9 ms