RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Bms1Q6PGF5 1284 aaKnown RBP17.65■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Atp10dQ8K2X1 1416 aa17.65■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Prkar2bP31324 416 aa17.65■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 TxlnaQ6PAM1 554 aaKnown RBP17.65■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Fermt2Q8CIB5 680 aa17.65■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Cpa2Q504N0 417 aa17.65■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Il1rapl2Q9ERS6 686 aa17.65■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Trim11Q99PQ2 467 aa17.64■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Trim30cD3YVI9 513 aa17.64■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Pafah1b1P63005 410 aaKnown RBP17.64■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Tmem132eQ6IEE6 982 aa17.64■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Zbtb21E9Q444 1094 aa17.64■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Gtpbp6Q3U6U5 514 aa17.64■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Slc12a5Q91V14 1138 aa17.64■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Ppip5k1A2ARP1 1436 aa17.64■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Usp5P56399 858 aaKnown RBP17.64■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Ddb1Q3U1J4 1140 aaKnown RBP17.64■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Pmfbp1Q9WVQ0 1022 aa17.63■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Tut1Q8R3F9 869 aa17.63■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Ddx10Q80Y44 875 aaKnown RBP17.63■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Tfip11Q9ERA6 838 aaKnown RBP17.63■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Stx8O88983 236 aa17.63■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Gjb2Q00977 226 aa17.63■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Snx25Q3ZT31 840 aa17.63■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Gbp4Q61107 620 aa17.63■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Ppip5k2Q6ZQB6 1129 aa17.63■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Lman1Q9D0F3 517 aa17.63■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Znf219Q6IQX8 726 aa17.62■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Dydc2Q9D3X8 139 aa17.62■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Msl1Q6PDM1 616 aa17.62■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Brms1Q99N20 246 aa17.62■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Igflr1Q3U4N7 345 aa17.62■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Med4Q9CQA5 270 aa17.62■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Homer1Q9Z2Y3 366 aa17.62■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Cct2P80314 535 aaKnown RBP17.62■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 ScaperF8VQ70 1398 aaKnown RBP17.62■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Map4k4P97820 1233 aaKnown RBP17.62■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Tbc1d2bQ3U0J8 965 aa17.61■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Asxl1P59598 1514 aa17.61■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Ccdc102aQ3TMW1 549 aa17.61■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Atxn3Q9CVD2 355 aa17.61■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Gapvd1Q6PAR5 1458 aa17.61■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Epb41l2O70318 988 aaKnown RBP17.61■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Slu7Q8BHJ9 585 aa17.61■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Def6Q8C2K1 630 aa17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Ctnnbl1Q9CWL8 563 aaKnown RBP17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Sptbn5F6UCX4 1208 aa17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Znf653Q6YND2 615 aa17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Plekhm2Q80TQ5 1018 aa17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Ccdc181Q80ZU5 509 aa17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Triml1Q8BVP1 470 aa17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Rnf34Q99KR6 376 aa17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Tiam1Q60610 1591 aa17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Cfap53Q9D439 514 aa17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Letm1Q9Z2I0 738 aa17.6■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Map9Q3TRR0 646 aa17.59■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Hand2Q61039 217 aa17.59■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Tacc1Q6Y685 774 aa17.59■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Tpd52l2Q9CYZ2 220 aaKnown RBP17.59■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Slc1a4O35874 532 aa17.59■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Cwc15Q9JHS9 229 aaKnown RBP17.59■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Api5O35841 504 aaKnown RBP17.59■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Ncapg2Q6DFV1 1138 aa17.58■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Zbtb3Q91X45 518 aa17.58■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Smtnl1Q99LM3 459 aa17.58■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Mctp2Q5RJH2 878 aa17.58■□□□□ 0.41
Ccdc50-203ENSMUST00000100026 Kdm3aQ6PCM1 1323 aa17.58■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Tmx4Q8C0L0 335 aa17.58■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Mapkbp1Q6NS57 1503 aa17.58■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Gtf3c3Q3TMP1 882 aa17.58■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Frmd3Q8BHD4 595 aa17.58■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 2310002L09RikQ9D7L5 217 aa17.58■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Mrpl12Q9DB15 201 aaKnown RBP17.57■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 AI481877A2ALV5 1481 aa17.57■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Ctnna2Q61301 953 aa17.57■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Bcar3Q9QZK2 820 aa17.57■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Zfp42P22227 288 aa17.57■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Slc4a8Q8JZR6 1089 aa17.57■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Sde2Q8K1J5 448 aaKnown RBP17.57■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Xrcc4Q924T3 326 aa17.57■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 RtcbQ99LF4 505 aaKnown RBP17.57■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 SynmQ70IV5 1561 aa17.56■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Zmynd15Q8C0R7 736 aa17.56■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Palm3A2TJV2 734 aa17.56■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Fam170aQ66LM6 333 aa17.56■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Jade2Q6ZQF7 829 aa17.56■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 DlatQ8BMF4 642 aa17.56■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Tspyl3Q3UYP3 334 aa17.56■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Kiaa1524Q8BWY9 907 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Myl6bQ8CI43 207 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Abcc5Q9R1X5 1436 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Hs2st1Q8R3H7 356 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Nop53Q8BK35 484 aaKnown RBP17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Naip7Q9JIB3 1402 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Naip6Q9JIB6 1403 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Pik3r4Q8VD65 1358 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Amotl2Q8K371 772 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Dydc1Q9D9T0 175 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Ccdc85cE9Q6B2 420 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Neurog2P70447 263 aa17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms