RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Gpr162Q3UN16 588 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Scaf1Q5U4C3 1256 aaKnown RBP8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 DekQ7TNV0 380 aaKnown RBP8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Pank1Q8K4K6 548 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Stard3nlQ9DCI3 235 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Plagl1Q9JLQ4 704 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Dbndd1Q9CZ00 160 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Als2Q920R0 1651 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 CltaO08585 235 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Map3k2Q61083 619 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Nrxn1Q9CS84 1514 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Apba2P98084 750 aa8.62□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Soga3Q6NZL0 945 aa8.62□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Q8C6G1 249 aa8.62□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Zfp142G5E869 1843 aa8.62□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Trip6Q9Z1Y4 480 aa8.62□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Myd88P22366 296 aa8.62□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Triml2E9PW10 424 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Aox2Q5SGK3 1345 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Unc13bQ9Z1N9 1602 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Slc4a3P16283 1227 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Zap70P43404 618 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Dok7Q18PE0 504 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Nsd3Q6P2L6 1439 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 PtprvP70289 1705 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Stox1B2RQL2 990 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Aifm3Q3TY86 605 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Irf9Q61179 399 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Cyp7a1Q64505 503 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Plekhm2Q80TQ5 1018 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Hirip3Q8BLH7 601 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Usp21Q9QZL6 566 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Tbc1d8Q9Z1A9 1134 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Pnpla7A2AJ88 1352 aa8.61□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Gimap8Q75N62 688 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Plcd4Q8K3R3 807 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Prr5lA2AVJ5 370 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 AU015836B2RUM3 263 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 En2P09066 324 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Cyp2c67Q569X9 491 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Cyp2d12Q8BVD2 504 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Q8C5K5 320 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Smc4Q8CG47 1286 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Amhr2Q8K592 568 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Ssfa2Q922B9 1252 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Supt16hQ920B9 1047 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Cyp2c23E9Q5K4 494 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Neurod6P48986 337 aa8.6□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Igsf1Q7TQA1 1317 aa8.59□□□□□ -1.03
Bdnf-201ENSMUST00000053317 CastP51125 788 aa8.59□□□□□ -1.03
Bdnf-201ENSMUST00000053317 CpzQ8R4V4 654 aa8.59□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Magea1O89006 320 aa8.59□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Magea5O89009 320 aa8.59□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Ankle2Q6P1H6 964 aa8.59□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Bicc1Q99MQ1 977 aaKnown RBP8.59□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Magea2Q9R2A2 320 aa8.59□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Sipa1l1Q8C0T5 1782 aa8.58□□□□□ -1.04
Bdnf-201ENSMUST00000053317 NmiO35309 314 aa8.58□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Dbr1Q923B1 550 aa8.58□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Lmbr1lQ9D1E5 489 aa8.58□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Vamp4O70480 141 aa8.58□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Atf7ipQ7TT18 1306 aa8.58□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Slit1Q80TR4 1531 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Tnnt2P50752 301 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Arid3aQ62431 601 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 NexnQ7TPW1 607 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 N4bp2F8VQG7 1678 aaKnown RBP8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Cyp2c69E9PXC3 491 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Cyp2c40P56657 491 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 CpvlQ9D3S9 478 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Nhsl1Q8CAF4 1587 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Gm7347D3YYI9 267 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Speer4aF8VPX6 267 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Hmgb2P30681 210 aaKnown RBP8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Iqsec3Q3TES0 1195 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Q3UPC7 1272 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 1810065E05RikQ5NC41 235 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 St5Q924W7 1134 aa8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Foxp4Q9DBY0 795 aaKnown RBP8.57□□□□□ -1.04
Bdnf-201ENSMUST00000053317 GpkowQ56A08 488 aa8.56□□□□□ -1.04
Bdnf-201ENSMUST00000053317 IbspQ61711 324 aa8.56□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Trim34bJ3QNR8 485 aa8.56□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Gigyf1Q99MR1 1044 aaKnown RBP8.56□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Clstn1Q9EPL2 979 aa8.56□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Magea6O89010 325 aa8.56□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Magea3Q6T340 320 aa8.56□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Trpc5Q9QX29 975 aa8.56□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Rbm33Q9CXK9 1231 aaKnown RBP8.55□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Akap2O54931 893 aa8.55□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Trim30dE9PWL0 497 aa8.55□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Ptcd1Q8C2E4 695 aaKnown RBP8.55□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Mst1rQ62190 1378 aa8.55□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Glg1Q61543 1175 aaKnown RBP8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 KarsQ99MN1 595 aaKnown RBP8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Echdc1Q9D9V3 322 aa8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Cwc25Q9DBF7 416 aa8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Foxo3Q9WVH4 672 aa8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Sart3Q9JLI8 962 aaKnown RBP8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Ankrd50F7BE84 1390 aa8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Cops6O88545 324 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms