RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Trim27Q62158 513 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Phlpp2Q8BXA7 1320 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Tpm3P21107 285 aaKnown RBP14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Tbc1d9Q3UYK3 1264 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Lrrcc1Q69ZB0 1026 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Smc2Q8CG48 1191 aaKnown RBP14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Knl1Q66JQ7 1612 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Grm8P47743 908 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Ubxn4Q8VCH8 506 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Ginm1Q91WR6 327 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Stk38Q91VJ4 465 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Ripk4Q9ERK0 786 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Uggt1Q6P5E4 1551 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 MsnP26041 577 aaKnown RBP14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Golim4Q8BXA1 655 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Nup133Q8R0G9 1155 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Adgrl1Q80TR1 1466 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Becn1O88597 448 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Gjb2Q00977 226 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Cep131Q62036 1060 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Rufy2Q8R4C2 606 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Myom2Q14BI5 1463 aa14.06□□□□□ -0.16
Pcif1-201ENSMUST00000041643 FancaQ9JL70 1439 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Tnni2P13412 182 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Card10P58660 1021 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Fam13aQ8BGI4 693 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Atp8b2P98199 1209 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Gm32742A0A1B0GT42 1604 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Rrp12Q6P5B0 1295 aaKnown RBP14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 March6Q6ZQ89 909 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Gimap8Q75N62 688 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 FanclQ9CR14 375 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Ccdc43Q9CR29 222 aaKnown RBP14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Dip2cE9PWR4 1557 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 SympkQ80X82 1284 aa14.05□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Odf2A3KGV1 830 aaKnown RBP14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Cdkl5Q3UTQ8 938 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Rbm26Q6NZN0 1012 aaKnown RBP14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Cep57l1Q8VDS7 400 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Hmgn5Q9JL35 406 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Abca6Q8K441 1624 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Nsd3Q6P2L6 1439 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Pof1bQ8K4L4 587 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Tbc1d7Q9D0K0 293 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Plekho1Q9JIY0 408 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Kdm3aQ6PCM1 1323 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Ttc21aQ8C0S4 1314 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Uhrf1bp1lA2RSJ4 1457 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Mctp2Q5RJH2 878 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Prkab2Q6PAM0 271 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Bicc1Q99MQ1 977 aaKnown RBP14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Cdc45Q9Z1X9 566 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Kdm6aO70546 1401 aa14.04□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Slc14a2Q8R4T9 930 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Zscan20B2KFW1 1030 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 NapbP28663 298 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Cnnm3Q32NY4 713 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Phkg2Q9DB30 406 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Adgrb3Q80ZF8 1522 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 MycnP03966 462 aaKnown RBP14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Trim28Q62318 834 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Ddrgk1Q80WW9 315 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Speer4dL7N216 212 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Tmem67Q8BR76 992 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Rai14Q9EP71 979 aaKnown RBP14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Gm7347D3YYI9 267 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Speer4aF8VPX6 267 aa14.03□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Spg7Q3ULF4 781 aa14.02□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Rnf214Q8BFU3 668 aaKnown RBP14.02□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Fam213aQ9CYH2 218 aa14.02□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Pdzd9Q9D9M4 266 aa14.02□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Cep152A2AUM9 1736 aaKnown RBP14.02□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Calcoco2A2A6M5 331 aa14.02□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Polr3dQ91WD1 398 aa14.02□□□□□ -0.16
Pcif1-201ENSMUST00000041643 ParvgQ9ERD8 331 aa14.02□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Snap23O09044 210 aa14.02□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Trim30aP15533 496 aa14.02□□□□□ -0.17
Pcif1-201ENSMUST00000041643 St5Q924W7 1134 aa14.02□□□□□ -0.17
Pcif1-201ENSMUST00000041643 NsmfQ99NF2 532 aa14.02□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Kiaa0556Q8C753 1610 aa14.02□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Kif24Q6NWW5 1356 aa14.02□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Pa2g4P50580 394 aaKnown RBP14.02□□□□□ -0.17
Pcif1-201ENSMUST00000041643 PdcQ9QW08 244 aa14.02□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Ppp6r1Q7TSI3 856 aa14.01□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Ppp4r3bQ922R5 820 aa14.01□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Fam135bQ9DAI6 1403 aa14.01□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Prr29B1ARI9 187 aa14.01□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Kiaa0754Q69ZZ9 979 aa14.01□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Cep55Q8BT07 462 aa14.01□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Anapc15-psA0A140T8L6 141 aa14.01□□□□□ -0.17
Pcif1-201ENSMUST00000041643 LifrP42703 1092 aa14.01□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Cpa2Q504N0 417 aa14.01□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Mbd5B1AYB6 1498 aa14□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Tshz3Q8CGV9 1081 aa14□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Rims1Q99NE5 1463 aa14□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Krt85Q9Z2T6 507 aa14□□□□□ -0.17
Pcif1-201ENSMUST00000041643 AU019823E9PUQ3 292 aa14□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Ppp1r21Q3TDD9 780 aa14□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Prpf4bQ61136 1007 aaKnown RBP14□□□□□ -0.17
Pcif1-201ENSMUST00000041643 Aldh1l2Q8K009 923 aa14□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 189.2 ms