RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Klhl34A2AI76 644 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ercc3P49135 783 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 L1td1Q587J6 782 aaKnown RBP6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Fam13aQ8BGI4 693 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Nphp4P59240 1425 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Mdc1Q5PSV9 1707 aa6.71□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 1700019A02RikA0A087WPV9 146 aa6.71□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Anapc15P60007 132 aa6.71□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Lrrc8aQ80WG5 810 aa6.71□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Slu7Q8BHJ9 585 aa6.71□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ttc27Q8CD92 847 aa6.71□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ccdc83Q9D4V3 305 aa6.71□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Igbp1bQ9QZ29 343 aa6.71□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Bcar3Q9QZK2 820 aa6.71□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Kdm5aQ3UXZ9 1690 aa6.71□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Kansl3A2RSY1 903 aaKnown RBP6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Atp2b1G5E829 1220 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 GscQ02591 256 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ttll12Q3UDE2 639 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Cgref1Q8R1U2 281 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 NaspQ99MD9 773 aaKnown RBP6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Slx4ipQ9D7Y9 413 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Gm11983V9GXS8 105 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Gm42641I6L9G2 585 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Zkscan4Q5SZT6 480 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Recql4Q75NR7 1216 aaKnown RBP6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Tmco3Q8BH01 678 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 AtripQ8BMG1 785 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 CrebrfQ8CDG5 640 aaKnown RBP6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Vps18Q8R307 973 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Zcchc17Q9ESX4 241 aaKnown RBP6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Exosc9Q9JHI7 438 aaKnown RBP6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Naip7Q9JIB3 1402 aa6.71□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Rfc1P35601 1131 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Zbtb38Q3LR78 1197 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Utp18Q5SSI6 552 aaKnown RBP6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Pdzrn3Q69ZS0 1063 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ccdc66Q6NS45 935 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Def6Q8C2K1 630 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Usp16Q99LG0 825 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Cdc37l1Q9CZP7 335 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Alpk3Q924C5 1678 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Cfap74Q3UY96 1578 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Nsd3Q6P2L6 1439 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Speer4f2E9Q366 295 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Vamp4O70480 141 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 CalrP14211 416 aaKnown RBP6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Samsn1P57725 372 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Frat2Q8K025 231 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ndufa8Q9DCJ5 172 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Zeb2Q9R0G7 1215 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Spata31d1bE9QA57 1361 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Rnf17Q99MV7 1640 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ktn1Q61595 1327 aaKnown RBP6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Gnai1B2RSH2 354 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Actn3O88990 900 aaKnown RBP6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Nap1l1P28656 391 aaKnown RBP6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Arid5bQ8BM75 1188 aaKnown RBP6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Smc1aQ9CU62 1233 aaKnown RBP6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Lonp2Q9DBN5 852 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Gnai3Q9DC51 354 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Sart1Q9Z315 806 aaKnown RBP6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Iqsec2Q5DU25 1478 aa6.7□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ubn2Q80WC1 1314 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Arhgap5P97393 1501 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Zrsr2Q62377 462 aaKnown RBP6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Prune1Q8BIW1 454 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 AdgbG3UZ78 1657 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Pola1P33609 1465 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Kif24Q6NWW5 1356 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Jakmip2D3YXK0 820 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Znf568E9PYI1 671 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Gjb2Q00977 226 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Maats1Q8BRC6 783 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ubxn4Q8VCH8 506 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Tlcd1Q99JT6 247 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ssr1Q9CY50 286 aaKnown RBP6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Cnpy2Q9QXT0 182 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Sall3Q62255 1320 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Arid3cA6PWV5 409 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Elmsan1E9Q2I4 1089 aaKnown RBP6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Surf1P09925 306 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 H2afxP27661 143 aaKnown RBP6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Cd22P35329 862 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Esyt1Q3U7R1 1092 aaKnown RBP6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ptpdc1Q6NZK8 747 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ube2oQ6ZPJ3 1288 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Cnksr2Q80YA9 1032 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Hook1Q8BIL5 728 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ddx27Q921N6 760 aaKnown RBP6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Dpf1Q9QX66 387 aa6.69□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ssh2Q5SW75 1423 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Exoc6bA6H5Z3 810 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Evi5lH3BKQ3 813 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ano10Q8BH79 659 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Dnaaf2Q8BPI1 814 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Paf1Q8K2T8 535 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 RestQ8VIG1 1082 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Fam76aQ922G2 307 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Scaf11E9PZM7 1456 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms