RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Tmc2Q8R4P4 888 aa19.31■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Klhdc4Q921I2 584 aa19.31■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 LyarQ08288 388 aaKnown RBP19.31■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 MicalclQ9D5U9 680 aa19.31■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Ripk4Q9ERK0 786 aa19.31■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Def6Q8C2K1 630 aa19.31■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Frmpd2A0A140LI67 1392 aa19.31■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Atf7ipQ7TT18 1306 aa19.3■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Themis2Q91YX0 663 aa19.3■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Nap1l5Q9JJF0 156 aa19.3■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Slf2Q6P9P0 1278 aa19.3■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 LlphQ9D945 130 aaKnown RBP19.3■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Txndc16Q7TN22 820 aa19.3■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Ppfia1B2RXQ2 1266 aa19.29■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Hvcn1Q3U2S8 269 aa19.29■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Brms1Q99N20 246 aa19.29■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Pdia4P08003 638 aaKnown RBP19.29■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Trim25Q61510 634 aaKnown RBP19.29■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Camsap2Q8C1B1 1461 aa19.29■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Spag5Q7TME2 1165 aa19.29■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Cwc25Q9DBF7 416 aa19.29■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Hmg20bQ9Z104 317 aa19.28■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Rad23bP54728 416 aa19.28■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Ssr1Q9CY50 286 aaKnown RBP19.28■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Igbp1bQ9QZ29 343 aa19.28■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Kdm5bQ80Y84 1544 aa19.28■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Fam83gQ5SWY7 812 aa19.28■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Trim27Q62158 513 aa19.28■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 FanclQ9CR14 375 aa19.28■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 4931400O07RikQ9D4M5 137 aa19.27■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Nol7Q9D7Z3 254 aaKnown RBP19.27■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Mipol1Q9D9F8 279 aa19.27■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Zkscan7E9PVW1 718 aa19.27■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Luzp1Q8R4U7 1068 aaKnown RBP19.27■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Nkx1-2P42580 305 aa19.27■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Dmrt2Q8BG36 561 aa19.27■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 BC005561E9Q5E2 1589 aa19.27■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Trim30cD3YVI9 513 aa19.26■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Prm3Q62100 101 aa19.26■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Tmem132eQ6IEE6 982 aa19.26■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Nsfl1cQ9CZ44 370 aaKnown RBP19.26■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Znf653Q6YND2 615 aa19.26■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 GptQ8QZR5 496 aa19.26■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Ccar2Q8VDP4 922 aaKnown RBP19.26■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Trappc8E9PWG2 1437 aa19.26■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Ube2hP62257 183 aa19.26■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Zmym3Q9JLM4 1370 aa19.25■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 LifrP42703 1092 aa19.25■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Exoc5Q3TPX4 708 aa19.25■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Dzip1Q8BMD2 852 aa19.25■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Zbtb21E9Q444 1094 aa19.25■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Traf3ip1Q149C2 625 aa19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Stat1P42225 749 aa19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Ccdc158Q8CDI6 1109 aa19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Lrrfip2Q91WK0 415 aa19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Ankrd1Q9CR42 319 aa19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Mrpl44Q9CY73 333 aaKnown RBP19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 KdrP35918 1367 aa19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Tmem94Q7TSH8 1360 aa19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Speer4dL7N216 212 aa19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Cavin2Q63918 418 aaKnown RBP19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Bloc1s2Q9CWG9 143 aa19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Mybbp1aQ7TPV4 1344 aaKnown RBP19.24■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Ifit1bl2Q3U687 466 aa19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Krt25Q8VCW2 446 aa19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 MycnP03966 462 aaKnown RBP19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Hand2Q61039 217 aa19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Ccdc181Q80ZU5 509 aa19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Ampd3O08739 766 aa19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Ppp1r21Q3TDD9 780 aa19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Znf131Q8K3J5 619 aa19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Naip7Q9JIB3 1402 aa19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Naip6Q9JIB6 1403 aa19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Plekho1Q9JIY0 408 aa19.23■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Cers3Q1A3B0 383 aa19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Cyp7a1Q64505 503 aa19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Knop1Q9Z2Q2 478 aaKnown RBP19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Abcf1Q6P542 837 aaKnown RBP19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Kdm3aQ6PCM1 1323 aa19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Stx1aO35526 288 aa19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Api5O35841 504 aaKnown RBP19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Amotl2Q8K371 772 aa19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Adcy5P84309 1262 aa19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Spg7Q3ULF4 781 aa19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Liat1Q810M6 228 aa19.22■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Izumo3A6PWV3 263 aa19.21■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Atp8b2P98199 1209 aa19.21■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Tacc1Q6Y685 774 aa19.21■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Bin1O08539 588 aaKnown RBP19.21■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Tspyl3Q3UYP3 334 aa19.21■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Ddx46Q569Z5 1032 aaKnown RBP19.21■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Nap1l2P51860 460 aa19.21■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Tmem266Q8BZB3 538 aa19.21■□□□□ 0.67
Ubfd1-201ENSMUST00000033158 Fbln2P37889 1221 aa19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Igf2bp2Q5SF07 592 aaKnown RBP19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Bms1Q6PGF5 1284 aaKnown RBP19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Mtmr3Q8K296 1196 aa19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 CenppQ9CZ92 286 aa19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Rbbp8nlA2ABX0 614 aa19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Pet2A2AHY8 747 aa19.2■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms