RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Gsto1O09131 240 aa12.63□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Nxf2Q4ZGD8 691 aa12.63□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Unc93aQ710D3 458 aa12.63□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Tsr2Q8C8T8 191 aa12.63□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Ddx27Q921N6 760 aaKnown RBP12.63□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Ccdc171E9Q1U1 1324 aa12.63□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Myom1Q62234 1667 aaKnown RBP12.63□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Brf1Q8CFK2 676 aa12.63□□□□□ -0.39
Rnf40-201ENSMUST00000033088 BcanQ61361 883 aa12.63□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Card6E9PWH2 1175 aa12.62□□□□□ -0.39
Rnf40-201ENSMUST00000033088 L1td1Q587J6 782 aaKnown RBP12.62□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Uri1Q3TLD5 531 aa12.62□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Fam13aQ8BGI4 693 aa12.62□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Stx6Q9JKK1 255 aa12.62□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Kif13aQ9EQW7 1749 aa12.62□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Cct2P80314 535 aaKnown RBP12.62□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Znhit6Q3UFB2 460 aaKnown RBP12.62□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Top1mtQ8R4U6 593 aa12.62□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Usp25P57080 1055 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Frat1P70339 274 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Ddx11Q6AXC6 880 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Otud6bQ8K2H2 294 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 NaspQ99MD9 773 aaKnown RBP12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Gm16486A0A1D5RMD1 1434 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Lekr1B2RVN1 116 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Mtx1P47802 317 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Adamtsl3G3UXC7 1706 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Ercc6l2Q9JIM3 1537 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Gm42641I6L9G2 585 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 AtripQ8BMG1 785 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Zswim4Q8C7B8 1101 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Il1rapl2Q9ERS6 686 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Itsn1Q9Z0R4 1714 aa12.61□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Dnajc2P54103 621 aaKnown RBP12.6□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Dnajc5P60904 198 aa12.6□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Med14A2ABV5 1459 aaKnown RBP12.6□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Ttll12Q3UDE2 639 aa12.6□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Cep135Q6P5D4 1140 aa12.6□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Stk38Q91VJ4 465 aa12.6□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Ndufa8Q9DCJ5 172 aa12.6□□□□□ -0.39
Rnf40-201ENSMUST00000033088 SetQ9EQU5 289 aaKnown RBP12.6□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Krt85Q9Z2T6 507 aa12.6□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Fam184aE9PW83 1143 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Ubxn4Q8VCH8 506 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Rbm33Q9CXK9 1231 aaKnown RBP12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Tex13c2A0A0G2JGA3 530 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Ankrd44B2RXR6 993 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Pdcl2Q78Y63 240 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Slu7Q8BHJ9 585 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Med4Q9CQA5 270 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Zeb2Q9R0G7 1215 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 InsrP15208 1372 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Ranbp1P34022 203 aaKnown RBP12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Irx2P81066 474 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 CenpqQ9CPQ5 267 aa12.59□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Mcm2P97310 904 aa12.58□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Hdgfl1Q2VPR5 283 aa12.58□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Cyp27a1Q9DBG1 533 aa12.58□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Tbc1d8Q9Z1A9 1134 aa12.58□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Zkscan16A2ALW2 728 aa12.58□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Fam83gQ5SWY7 812 aa12.58□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Tpm1P58771 284 aa12.58□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Bach2P97303 839 aa12.58□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Nbr1P97432 988 aa12.58□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Nucb1Q02819 459 aaKnown RBP12.58□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Atp2b3Q0VF55 1220 aa12.58□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Ltv1Q6NSQ7 470 aaKnown RBP12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Fsd1Q7TPM6 496 aa12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Cdk19Q8BWD8 501 aa12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Nrbp1Q99J45 535 aa12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 MaddQ80U28 1577 aa12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Paxbp1P58501 919 aa12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Map4k4P97820 1233 aaKnown RBP12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Spag5Q7TME2 1165 aa12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Rnf20Q5DTM8 973 aa12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Wdr3Q8BHB4 942 aaKnown RBP12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Polr3dQ91WD1 398 aa12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Krt82Q99M74 516 aa12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Kdm5aQ3UXZ9 1690 aa12.57□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Zc3h13E9Q784 1729 aaKnown RBP12.56□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Abl1P00520 1123 aa12.56□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Nol11Q8BJW5 723 aaKnown RBP12.56□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Arhgef28P97433 1693 aa12.56□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Ift172Q6VH22 1749 aa12.56□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Bag1Q60739 355 aa12.56□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Mknk2Q8CDB0 459 aa12.56□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Syt10Q9R0N4 523 aa12.56□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Oas2E9Q9A9 742 aa12.56□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Nucb2P81117 420 aa12.56□□□□□ -0.4
Rnf40-201ENSMUST00000033088 TmpoQ61033 693 aaKnown RBP12.55□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Tex19.1Q99MV2 351 aa12.55□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Snap23O09044 210 aa12.55□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Prim1P20664 417 aa12.55□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Prpf4bQ61136 1007 aaKnown RBP12.55□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Ccar2Q8VDP4 922 aaKnown RBP12.55□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Eif2ak4Q9QZ05 1648 aa12.55□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Pcdh10E9PXQ7 1057 aa12.55□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Fam170aQ66LM6 333 aa12.55□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Psmb7P70195 277 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Wwc1Q5SXA9 1104 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 67.3 ms