RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 MccE9PWI3 1003 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Cap2Q9CYT6 476 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 LratQ9JI60 231 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Sh3bp5Q9Z131 463 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Kif20bQ80WE4 1774 aaKnown RBP9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Ankle2Q6P1H6 964 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Bend3Q6PAL0 825 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Dmrt2Q8BG36 561 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Rrs1Q9CYH6 365 aaKnown RBP9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Simc1E9Q6E9 1354 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Myd88P22366 296 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Ddb1Q3U1J4 1140 aaKnown RBP9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Tgfb1i1Q62219 461 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Ppip5k2Q6ZQB6 1129 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Jmjd4Q8BFT6 427 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 GptQ8QZR5 496 aa9.55□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Camta1A2A891 1682 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Pard3Q99NH2 1333 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Col16a1Q8BLX7 1580 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Syde2E9PUP1 1314 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Eif3aP23116 1344 aaKnown RBP9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Rimbp3Q3V0F0 1606 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Sptbn5F6UCX4 1208 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Mmp8O70138 465 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 NexnQ7TPW1 607 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Miga2Q8BK03 593 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Jakmip1Q8BVL9 626 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Mcmdc2E9Q956 681 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Hsp90aa1P07901 733 aaKnown RBP9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Hspa1lP16627 641 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Ets1P27577 440 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Gnl3lQ6PGG6 577 aaKnown RBP9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Bsdc1Q80Y55 427 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Htatsf1Q8BGC0 757 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Prune1Q8BIW1 454 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Brf1Q8CFK2 676 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Tshz3Q8CGV9 1081 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Klc3Q91W40 508 aa9.54□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Alpk3Q924C5 1678 aa9.53□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Zmym3Q9JLM4 1370 aa9.53□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Aldh8a1Q8BH00 487 aa9.53□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Kif1aP33173 1695 aa9.53□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 VeztQ3ZK22 780 aa9.53□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Lrrc59Q922Q8 307 aaKnown RBP9.53□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Il1rapl2Q9ERS6 686 aa9.53□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Sipa1l2Q80TE4 1722 aa9.53□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Igfbp6P47880 238 aa9.52□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Iqsec3Q3TES0 1195 aa9.52□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Tbc1d32Q3URV1 1296 aa9.52□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Erc2Q6PH08 957 aa9.52□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Pdia3P27773 505 aaKnown RBP9.52□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Sik1Q60670 779 aa9.52□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ddx58Q6Q899 926 aa9.52□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Pik3c2aQ61194 1686 aa9.52□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Arap3Q8R5G7 1538 aa9.52□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Rapgef4Q9EQZ6 1011 aa9.52□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Tpx2A2APB8 745 aaKnown RBP9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ppp1r9bQ6R891 817 aaKnown RBP9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Dhx38Q80X98 1228 aa9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Sgsm1Q8BPQ7 1093 aa9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Znf541Q0GGX2 1363 aa9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Mre11Q61216 706 aa9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Nlrp3Q8R4B8 1033 aa9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Zbtb3Q91X45 518 aa9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ybx3Q9JKB3 361 aaKnown RBP9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ltv1Q6NSQ7 470 aaKnown RBP9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Abcc12Q80WJ6 1366 aa9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Cwc25Q9DBF7 416 aa9.51□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Adora1Q60612 326 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Slf2Q6P9P0 1278 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Clstn1Q9EPL2 979 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Hdac6Q9Z2V5 1149 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 NalcnQ8BXR5 1738 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Gnat3Q3V3I2 354 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Dcaf5Q80T85 946 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ints5Q8CHT3 1018 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Tmem119Q8R138 280 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 C5P06684 1680 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 AceP09470 1312 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Stk36Q69ZM6 1316 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Cct4P80315 539 aaKnown RBP9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ccdc129Q14B48 1034 aa9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Pes1Q9EQ61 584 aaKnown RBP9.5□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 D430041D05RikF6ZGR6 1678 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 N4bp2F8VQG7 1678 aaKnown RBP9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Mum1Q6DID5 682 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 4930504O13RikQ8C5Z9 145 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 RestQ8VIG1 1082 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Chrna2Q91X60 512 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Nsfl1cQ9CZ44 370 aaKnown RBP9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 NgdnQ9DB96 315 aaKnown RBP9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Eva1cP58659 440 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Gm12185Q5NCB2 835 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Nol12Q8BG17 217 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Pdia6Q922R8 440 aaKnown RBP9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Pde3bQ61409 1100 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Trim34aQ99PP6 485 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 CenppQ9CZ92 286 aa9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Bag3Q9JLV1 577 aaKnown RBP9.49□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Sytl4Q9R0Q1 673 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms