RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 LETMD1Q6P1Q0 360 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 CRTC1Q6UUV9 634 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 GPSM1Q86YR5 675 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 GPR156Q8NFN8 814 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 ADAMTS14Q8WXS8 1223 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 OPALINQ96PE5 141 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 YIPF4Q9BSR8 244 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 ADGRE3Q9BY15 652 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 ZFP14Q9HCL3 533 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 AGPAT4Q9NRZ5 378 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 AHSPQ9NZD4 102 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 KLQ9UEF7 1012 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 FXYD6-FXYD2A0A087WZ82 144 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 VNN1O95497 513 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 CKMP06732 381 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 SRPRAP08240 638 aaKnown RBP8.03□□□□□ -1.12
NECAP1-227ENST00000640648 GSTM3P21266 225 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 DDX6P26196 483 aaKnown RBP eCLIP8.03□□□□□ -1.12
NECAP1-227ENST00000640648 ALDH4A1P30038 563 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 CHI3L1P36222 383 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-227ENST00000640648 APLP1P51693 650 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 SLC16A1P53985 500 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 NAE1Q13564 534 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 GPRIN3Q6ZVF9 776 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 ZSWIM9Q86XI8 627 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 MOGAT1Q96PD6 335 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 FXYD6Q9H0Q3 95 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 ABCB9Q9NP78 766 aa8.03□□□□□ -1.12
NECAP1-227ENST00000640648 CNOT2Q9NZN8 540 aaKnown RBP8.03□□□□□ -1.12
NECAP1-227ENST00000640648 COL1A1P02452 1464 aaPredicted RBP8.02□□□□□ -1.12
NECAP1-227ENST00000640648 ACADMP11310 421 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 ATP5C1P36542 298 aaKnown RBP8.02□□□□□ -1.12
NECAP1-227ENST00000640648 GSK3BP49841 420 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 BOP1Q14137 746 aaKnown RBP8.02□□□□□ -1.12
NECAP1-227ENST00000640648 SLC39A12Q504Y0 691 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 C10orf62Q5T681 223 aaPredicted RBP8.02□□□□□ -1.12
NECAP1-227ENST00000640648 SYT6Q5T7P8 510 aaPredicted RBP8.02□□□□□ -1.12
NECAP1-227ENST00000640648 SLC22A25Q6T423 547 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 LCLAT1Q6UWP7 414 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 SLAIN1Q8ND83 568 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 OR52L1Q8NGH7 329 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 SLC35B2Q8TB61 432 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 ST7LQ8TDW4 575 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 CNOT9Q92600 299 aaKnown RBP8.02□□□□□ -1.12
NECAP1-227ENST00000640648 KCTD12Q96CX2 325 aaKnown RBP8.02□□□□□ -1.12
NECAP1-227ENST00000640648 SAP130Q9H0E3 1048 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 IL1RAPQ9NPH3 570 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 IL37Q9NZH6 218 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 ASH2LQ9UBL3 628 aa8.02□□□□□ -1.12
NECAP1-227ENST00000640648 UBR1Q8IWV7 1749 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 AKAP12Q02952 1782 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 SMCO3A2RU48 225 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 GPR25O00155 361 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 CDK2AP1O14519 115 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 NIPSNAP2O75323 286 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 STAU1O95793 577 aaKnown RBP8.02□□□□□ -1.13
NECAP1-227ENST00000640648 JUNP05412 331 aaKnown RBP8.02□□□□□ -1.13
NECAP1-227ENST00000640648 ETFAP13804 333 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 PCSK6P29122 969 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 CA5AP35218 305 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 MRPS5P82675 430 aaKnown RBP8.02□□□□□ -1.13
NECAP1-227ENST00000640648 GRM3Q14832 879 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 MEP1AQ16819 746 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 MSS51Q4VC12 460 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 STEAP3Q658P3 488 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 ABLIM2Q6H8Q1 611 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 CGB2Q6NT52 195 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 ZNF621Q6ZSS3 439 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 MFSD6LQ8IWD5 586 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 KLHL36Q8N4N3 616 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 PCDH19Q8TAB3 1148 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 GTF3C2Q8WUA4 911 aaPredicted RBP8.02□□□□□ -1.13
NECAP1-227ENST00000640648 RIT1Q92963 219 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 TMEM248Q9NWD8 314 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 ZSCAN32Q9NX65 697 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 MARK1Q9P0L2 795 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 MYEF2Q9P2K5 600 aaKnown RBP8.02□□□□□ -1.13
NECAP1-227ENST00000640648 GMPR2Q9P2T1 348 aaKnown RBP8.02□□□□□ -1.13
NECAP1-227ENST00000640648 COPS3Q9UNS2 423 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 SNED1Q8TER0 1413 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 TRAV20A0A0B4J274 112 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 FAM221BA6H8Z2 402 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 AGAP14A8MT82 685 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 CXorf49A8MYA2 514 aaPredicted RBP8.02□□□□□ -1.13
NECAP1-227ENST00000640648 CCL22O00626 93 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 SIGLEC6O43699 453 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 ALDH1A1P00352 501 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 HK1P19367 917 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 SDHAF4Q5VUM1 108 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 GCNT7Q6ZNI0 430 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 GAREM2Q75VX8 874 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 LDB1Q86U70 411 aaPredicted RBP8.02□□□□□ -1.13
NECAP1-227ENST00000640648 CD163Q86VB7 1156 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 LINC00518Q8N0U6 118 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 CLDN22Q8N7P3 220 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 DCBLD1Q8N8Z6 715 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 C11orf65Q8NCR3 313 aa8.02□□□□□ -1.13
NECAP1-227ENST00000640648 ZNF548Q8NEK5 533 aaPredicted RBP8.02□□□□□ -1.13
NECAP1-227ENST00000640648 CPNE4Q96A23 557 aaPredicted RBP8.02□□□□□ -1.13
NECAP1-227ENST00000640648 BIRC7Q96CA5 298 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms