RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 DUS3LQ96G46 650 aaKnown RBP11.1□□□□□ -0.63
CLN6-217ENST00000636964 PPP3R2Q96LZ3 170 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 FOPNLQ96NB1 174 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 TMEM74Q96NL1 305 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 NELL2Q99435 816 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 ZCCHC2Q9C0B9 1178 aaKnown RBP11.1□□□□□ -0.63
CLN6-217ENST00000636964 EMC3Q9P0I2 261 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 CD300AQ9UGN4 299 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 EGFL7Q9UHF1 273 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 CFAP20Q9Y6A4 193 aaKnown RBP11.1□□□□□ -0.63
CLN6-217ENST00000636964 BBIP1A8MTZ0 92 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 E7EQ34 232 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 SLC28A1O00337 649 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 CD22P20273 847 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 ATP6V1B2P21281 511 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 MAT2AP31153 395 aaKnown RBP11.1□□□□□ -0.63
CLN6-217ENST00000636964 GRSF1Q12849 480 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLN6-217ENST00000636964 PRKG2Q13237 762 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 INPP5AQ14642 412 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 STARD3Q14849 445 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 PON2Q15165 354 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 IER5LQ5T953 404 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 C8orf82Q6P1X6 216 aaPredicted RBP11.1□□□□□ -0.63
CLN6-217ENST00000636964 SUSD1Q6UWL2 747 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 ZNF765Q7L2R6 523 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 MFSD2AQ8NA29 543 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 USP7Q93009 1102 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 ROPN1LQ96C74 230 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 OR4K3Q96R72 315 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.1□□□□□ -0.63
CLN6-217ENST00000636964 ADNPQ9H2P0 1102 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 C12orf10Q9HB07 376 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 WASH6PQ9NQA3 447 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 HEBP1Q9NRV9 189 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 SLC23A2Q9UGH3 650 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 EDARQ9UNE0 448 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 NPC1O15118 1278 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SCAMP1O15126 338 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 BMP2P12643 396 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 IGFBP4P22692 258 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 TGM1P22735 817 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SLC6A2P23975 617 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 IMPA1P29218 277 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
CLN6-217ENST00000636964 MERTKQ12866 999 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 CAMK2GQ13555 558 aaPredicted RBP11.09□□□□□ -0.63
CLN6-217ENST00000636964 DNASE1L3Q13609 305 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SF1Q15637 639 aaKnown RBP11.09□□□□□ -0.63
CLN6-217ENST00000636964 PGS1Q32NB8 556 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 ADNP2Q6IQ32 1131 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 TRIM46Q7Z4K8 759 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SYTL1Q8IYJ3 562 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 OR14C36Q8NHC7 312 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SNX19Q92543 992 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 RAB7BQ96AH8 199 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 CCDC138Q96M89 665 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 MTERF1Q99551 399 aaKnown RBP11.09□□□□□ -0.63
CLN6-217ENST00000636964 MRPL40Q9NQ50 206 aaKnown RBP11.09□□□□□ -0.63
CLN6-217ENST00000636964 CMTM6Q9NX76 183 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 FBXL12Q9NXK8 326 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 ZIM2Q9NZV7 527 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 PLAGL1Q9UM63 463 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 ERVK-11Q9UQG0 969 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 EIF3LQ9Y262 564 aaKnown RBP11.09□□□□□ -0.63
CLN6-217ENST00000636964 TICRRQ7Z2Z1 1910 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 KCNE1BA0A087WTH5 132 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 FAM234BA2RU67 622 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 ACOX3O15254 700 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 CLPXO76031 633 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 C1orf105O95561 183 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 EGFP01133 1207 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 FGL2Q14314 439 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SPCS2Q15005 226 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 TMEM196Q5HYL7 178 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 XAF1Q6GPH4 301 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 METTL2BQ6P1Q9 378 aaKnown RBP11.09□□□□□ -0.63
CLN6-217ENST00000636964 FAM124AQ86V42 546 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 ABHD11Q8NFV4 315 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SIRT5Q9NXA8 310 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 IL20Q9NYY1 176 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 ANKRD28O15084 1053 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 LATO43561 262 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 CPNE6O95741 557 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 NAGAP17050 411 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 POLR2GP62487 172 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLN6-217ENST00000636964 CDK3Q00526 305 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 DOC2AQ14183 400 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 C21orf62-AS1Q17RA5 79 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 ZNF658BQ4V348 819 aaPredicted RBP11.09□□□□□ -0.63
CLN6-217ENST00000636964 BCL7AQ4VC05 210 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SAMD4BQ5PRF9 694 aaKnown RBP11.09□□□□□ -0.63
CLN6-217ENST00000636964 HACD2Q6Y1H2 254 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 ZFAND4Q86XD8 727 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 RASGRP3Q8IV61 690 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 ATL1Q8WXF7 558 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SH3YL1Q96HL8 342 aaPredicted RBP11.09□□□□□ -0.63
CLN6-217ENST00000636964 C1orf109Q9NX04 203 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 BCAP29Q9UHQ4 241 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SNX6Q9UNH7 406 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 ZFR2Q9UPR6 939 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms