RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 FAM25EA8MYX2 175 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 ZNF182P17025 639 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-219ENST00000636466 ZNF24P17028 368 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 SLC6A4P31645 630 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 STAT5AP42229 794 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 ACADVLP49748 655 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 MLLT10P55197 1068 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 TLR1Q15399 786 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 DPY19L2P1Q6NXN4 242 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 SLC39A5Q6ZMH5 540 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 LRRC17Q8N6Y2 441 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 OR5M3Q8NGP4 307 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 GEMIN6Q8WXD5 167 aaKnown RBP13.73□□□□□ -0.21
GABRB3-219ENST00000636466 ZNF641Q96N77 438 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-219ENST00000636466 RACGAP1Q9H0H5 632 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 CLCA3PQ9Y6N3 262 aa13.73□□□□□ -0.21
GABRB3-219ENST00000636466 DAPL1A0PJW8 107 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 CFIP05156 583 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 FPR1P21462 350 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 GCAP28676 217 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 ALDH3A2P51648 485 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 DHCR24Q15392 516 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 CLECL1Q8IZS7 167 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 ALPK1Q96QP1 1244 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 PDCD10Q9BUL8 212 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 RNF38Q9H0F5 515 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 FAM120CQ9NX05 1096 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 ALKBH4Q9NXW9 302 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 OR1A2Q9Y585 309 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 FEZF1A0PJY2 475 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 SLC16A8O95907 504 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 RPLP0P05388 317 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 GIMD1P0DJR0 217 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 CAPN3P20807 821 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 MC1RQ01726 317 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 SUZ12Q15022 739 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 TMC8Q8IU68 726 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 ENDOVQ8N8Q3 282 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 KLHDC9Q8NEP7 349 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 CNIH3Q8TBE1 160 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 TSEN15Q8WW01 171 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 NKD1Q969G9 470 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 AIG1Q9NVV5 245 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 HEPACAM2A8MVW5 462 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 ARHGEF33A8MVX0 844 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 KMOO15229 486 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 IL3P08700 152 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 NFE2L1Q14494 772 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 SLC22A15Q8IZD6 547 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 TCEANCQ8N8B7 351 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 RFKQ969G6 155 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 SLC22A18Q96BI1 424 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 GPER1Q99527 375 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 C20orf27Q9GZN8 174 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 DCSTAMPQ9H295 470 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 NECTIN3Q9NQS3 549 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 MKS1Q9NXB0 559 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 NPIPB15A6NHN6 443 aaPredicted RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 KHNYNO15037 678 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 ARSAP15289 507 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 GRK6P43250 576 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 TBPL1P62380 186 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 DEFB134Q4QY38 66 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 PDCD4Q53EL6 469 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 AKIRIN2Q53H80 203 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 DNAJB8Q8NHS0 232 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 NCSTNQ92542 709 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 C12orf43Q96C57 262 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 BARD1Q99728 777 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 ELAC1Q9H777 363 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 MRTO4Q9UKD2 239 aaKnown RBP13.72□□□□□ -0.21
GABRB3-219ENST00000636466 TMED5Q9Y3A6 229 aa13.72□□□□□ -0.21
GABRB3-219ENST00000636466 TIAM2Q8IVF5 1701 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 TLR4O00206 839 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 PSMD9O00233 223 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 BLKP51451 505 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 ZBED5Q49AG3 693 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 LETMD1Q6P1Q0 360 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 NCEH1Q6PIU2 408 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 ARL9Q6T311 187 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 CRTC1Q6UUV9 634 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 VTCN1Q7Z7D3 282 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 LMNTD1Q8N9Z9 388 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 DMRTB1Q96MA1 342 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 SATB2Q9UPW6 733 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 PMF1-BGLAPU3KQ54 211 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 CBLP22681 906 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 CLCN7P51798 805 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 MLIPQ5VWP3 458 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 FAM92BQ6ZTR7 304 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 SPNS2Q8IVW8 549 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 MAL2Q969L2 176 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 HSPBAP1Q96EW2 488 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 MYH4Q9Y623 1939 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 EVPLQ92817 2033 aa13.71□□□□□ -0.21
GABRB3-219ENST00000636466 DUXAA6NLW8 204 aa13.71□□□□□ -0.22
GABRB3-219ENST00000636466 TMEM150CB9EJG8 249 aa13.71□□□□□ -0.22
GABRB3-219ENST00000636466 KAT7O95251 611 aa13.71□□□□□ -0.22
GABRB3-219ENST00000636466 SRCP12931 536 aa13.71□□□□□ -0.22
GABRB3-219ENST00000636466 EPCAMP16422 314 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms