RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 KCNA7Q96RP8 456 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 CD244Q9BZW8 370 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 CAPN10Q9HC96 672 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 GIMAP4Q9NUV9 329 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 KLHL42Q9P2K6 505 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 ABCD2Q9UBJ2 740 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 TMPRSS11EQ9UL52 423 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 AP4S1Q9Y587 144 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 PRUNE2Q8WUY3 3088 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 HOXD12P35452 270 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 GRB7Q14451 532 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 HMBOX1Q6NT76 420 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 IYDQ6PHW0 289 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 LRRC70Q7Z2Q7 622 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 TSPEARQ8WU66 669 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 DPYSL5Q9BPU6 564 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 KCTD14Q9BQ13 255 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 MIEF1Q9NQG6 463 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 NDUFA13Q9P0J0 144 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 PCDHGA11Q9Y5H2 935 aa11.98□□□□□ -0.49
SYNGAP1-207ENST00000628646 SLC5A10A0PJK1 596 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 PIP5K1BO14986 540 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 SIGLEC6O43699 453 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 RPLP0P05388 317 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 OR1D5P58170 312 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 PDK3Q15120 406 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 RBM12BQ8IXT5 1001 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 ARL10Q8N8L6 244 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 OR6C4Q8NGE1 309 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 OR5K2Q8NHB8 316 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 CLIP3Q96DZ5 547 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 COX14Q96I36 57 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 PDE7BQ9NP56 450 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 WDR37Q9Y2I8 494 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 ASB1Q9Y576 335 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 PCDHGA5Q9Y5G8 931 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 EME2A4GXA9 379 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 FAM221BA6H8Z2 402 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 ASPDHA6ND91 283 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 GPR37L1O60883 481 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 WNT1P04628 370 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 PVRP15151 417 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 EPHA8P29322 1005 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 DEFB110Q30KQ9 67 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 CCSMST1Q4G0I0 132 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 DNASE2BQ8WZ79 361 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 SLC45A3Q96JT2 553 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 EFCAB11Q9BUY7 163 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 THUMPD3Q9BV44 507 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 ACTR10Q9NZ32 417 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 SH3BP4Q9P0V3 963 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 PILRBQ9UKJ0 227 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 DGKBQ9Y6T7 804 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 CAPN5O15484 640 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 SLCO2B1O94956 709 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 RPS17P08708 135 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 MAGP20916 626 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 FASP25445 335 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 MRPL19P49406 292 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 SIM1P81133 766 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 LAPTM5Q13571 262 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 NEK10Q6ZWH5 1172 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 GOLGA7Q7Z5G4 137 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 TRIML2Q8N7C3 387 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 SLC39A3Q9BRY0 314 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 SPATA7Q9P0W8 599 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 KIF26AQ9ULI4 1882 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 PRAMEF33A0A0G2JMD5 474 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 C7orf72A4D263 438 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 SAP18O00422 153 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 CAPN3P20807 821 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 MYBPC1Q00872 1141 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 TRAP1Q12931 704 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 NDUFA9Q16795 377 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 TMIGD1Q6UXZ0 262 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 ZNF547Q8IVP9 402 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 TTC29Q8NA56 475 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 ADCY4Q8NFM4 1077 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 ZNF480Q8WV37 535 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 CCDC74AQ96AQ1 378 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 NSMCE2Q96MF7 247 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 PRMT8Q9NR22 394 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 SNX13Q9Y5W8 968 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 SLCO1B1Q9Y6L6 691 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 ASXL3Q9C0F0 2248 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 PLXNB3Q9ULL4 1909 aa11.97□□□□□ -0.49
SYNGAP1-207ENST00000628646 NDUFS4O43181 175 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 TNNI3P19429 210 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 PSMB5P28074 263 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 PRDX3P30048 256 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 RHDQ02161 417 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 CHRNB3Q05901 458 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 ADRM1Q16186 407 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 GALNT4Q8N4A0 578 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 APOLD1Q96LR9 279 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 OR6C2Q9NZP2 312 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 CNOT11Q9UKZ1 510 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 BTN3A3O00478 584 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 SGTAO43765 313 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 TGFB1P01137 390 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms