RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 GPR153Q6NV75 609 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 TRIM73Q86UV7 250 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 OR4N5Q8IXE1 308 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 OR7A2PQ8NGA2 310 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 OR5AR1Q8NGP9 310 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 ZDHHC1Q8WTX9 485 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 ZNF570Q96NI8 536 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 FCRL4Q96PJ5 515 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 IFT27Q9BW83 186 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 POLR2J3Q9H1A7 115 aaKnown RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 H3BNC9 293 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 COQ9O75208 318 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 RNH1P13489 461 aaKnown RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 MAGP20916 626 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 RBMS1P29558 406 aaKnown RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 CSNK1EP49674 416 aaKnown RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 ARF5P84085 180 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 PKDCCQ504Y2 493 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 RABL3Q5HYI8 236 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 CRB2Q5IJ48 1285 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 ZNF311Q5JNZ3 666 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 FIGLAQ6QHK4 219 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 RSPO2Q6UXX9 243 aaPredicted RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 OAFQ86UD1 273 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 LINC01465Q8N7H1 131 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 ZNF527Q8NB42 609 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 RNASE11Q8TAA1 199 aaKnown RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 SNX33Q8WV41 574 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 C10orf82Q8WW14 230 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 KLHL6Q8WZ60 621 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 SLC39A13Q96H72 371 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 ZNF382Q96SR6 550 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 CADM1Q9BY67 442 aaKnown RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 LDAHQ9H6V9 325 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 S100A14Q9HCY8 104 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 NEUROD4Q9HD90 331 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 MKKSQ9NPJ1 570 aaPredicted RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 PAK6Q9NQU5 681 aaPredicted RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 PAPOLBQ9NRJ5 636 aaKnown RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 ZIM2Q9NZV7 527 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 TMED5Q9Y3A6 229 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 IRAK3Q9Y616 596 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 MYH4Q9Y623 1939 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 IQCMA0A1B0GVH7 501 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 CENPXA8MT69 81 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 BHMG1C9JSJ3 638 aaPredicted RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 MATN2O00339 956 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 PRKD3O94806 890 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 CCNB2O95067 398 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 THRBP10828 461 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 ALOX12P18054 663 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 PTNP21246 168 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 CD38P28907 300 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 CTHP32929 405 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 ACTR3P61158 418 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 FOLH1Q04609 750 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 SLAMF1Q13291 335 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 SIX1Q15475 284 aaPredicted RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 PPP1R3AQ16821 1122 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 GFOD2Q3B7J2 385 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 EIPR1Q53HC9 387 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 NADSYN1Q6IA69 706 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 ANKRD54Q6NXT1 300 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 ZNF433Q8N7K0 673 aaPredicted RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 GATSQ8NAP1 163 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 OR8K5Q8NH50 307 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 LRTOMTQ8WZ04 291 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 EFHD2Q96C19 240 aaPredicted RBP8.92□□□□□ -0.98
GGA3-223ENST00000621870 GPER1Q99527 375 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 GORASP1Q9BQQ3 440 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 RDH14Q9HBH5 336 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 POPDC3Q9HBV1 291 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 CMTM6Q9NX76 183 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 TVP23BQ9NYZ1 205 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 MYH15Q9Y2K3 1946 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 TTC28Q96AY4 2481 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 MYH8P13535 1937 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 BCKDKO14874 412 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 DIRAS1O95057 198 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 TIMP2P16035 220 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 HOXB6P17509 224 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 RCVRNP35243 200 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 CHN2P52757 468 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 SIM1P81133 766 aaPredicted RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 EMX2Q04743 252 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 CLEC12AQ5QGZ9 265 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 PARM1Q6UWI2 310 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 KRT77Q7Z794 578 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 VN1R2Q8NFZ6 395 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 RHEBL1Q8TAI7 183 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 TRNT1Q96Q11 434 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 GPATCH1Q9BRR8 931 aaKnown RBP8.91□□□□□ -0.98
GGA3-223ENST00000621870 C11orf16Q9NQ32 467 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 MS4A12Q9NXJ0 267 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 HSFX1Q9UBD0 423 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 CACNA1SQ13698 1873 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 ZCWPW2A0A1B0GU75 182 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 CKMT2P17540 419 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 IVDP26440 423 aa8.91□□□□□ -0.98
GGA3-223ENST00000621870 CTGFP29279 349 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms