RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 VPS13AQ96RL7 3174 aa10.55□□□□□ -0.72
SNORD3D-201ENST00000619178 GPR179Q6PRD1 2367 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 EP300Q09472 2414 aaPredicted RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 MAGEB17A8MXT2 336 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 TMEM233B4DJY2 109 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 KIF1CO43896 1103 aaKnown RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 PRAMEF4O60810 478 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 CCDC22O60826 627 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 SEC22BO75396 215 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 DCTN3O75935 186 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 OR2B3O76000 313 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 EIF2S1P05198 315 aaKnown RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 LINC00032P0C843 101 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 ACPPP15309 386 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 SERPINB3P29508 390 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 BCL6P41182 706 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 NOVA1P51513 510 aaKnown RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 FOXA1P55317 472 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 ITGA1P56199 1179 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 VSX2P58304 361 aaPredicted RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 RAB15P59190 212 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 STX1BP61266 288 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 PPP1CAP62136 330 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 RPS13P62277 151 aaKnown RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 ZFP36L1Q07352 338 aaKnown RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 TUBB3Q13509 450 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 ABRAXAS2Q15018 415 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 HERC3Q15034 1050 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 RPS6KA2Q15349 733 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 MUM1Q2TAK8 710 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 DEPDC1Q5TB30 811 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 TMEM164Q5U3C3 297 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 PRAMEF9Q5VWM5 478 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 CES4AQ5XG92 561 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 FBXO42Q6P3S6 717 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 EPGNQ6UW88 154 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 NUDT13Q86X67 352 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 SLITRK4Q8IW52 837 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 FAM20CQ8IXL6 584 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 CACNA2D3Q8IZS8 1091 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 DNAJC22Q8N4W6 341 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 CSNK1A1LQ8N752 337 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 ANKRD53Q8N9V6 530 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 ZNF740Q8NDX6 193 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 OR2L5Q8NG80 312 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 LIN37Q96GY3 246 aaPredicted RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 ZPBPQ9BS86 351 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 TBCDQ9BTW9 1192 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 NDC1Q9BTX1 674 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 REXO4Q9GZR2 422 aaKnown RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 RABEP2Q9H5N1 569 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 CLK4Q9HAZ1 481 aaKnown RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 LRTM1Q9HBL6 345 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 FGF21Q9NSA1 209 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 NOP53Q9NZM5 478 aaKnown RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 CCDC88CQ9P219 2028 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 DCTN4Q9UJW0 460 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 ADAM29Q9UKF5 820 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 RARRES3Q9UL19 164 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 CDC14AQ9UNH5 594 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 CLCA2Q9UQC9 943 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 WBP11Q9Y2W2 641 aaKnown RBP10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 ARL2BPQ9Y2Y0 163 aa10.54□□□□□ -0.72
SNORD3D-201ENST00000619178 CCDC187A0A096LP49 1063 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 LRIT2A6NDA9 550 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 TMEM150CB9EJG8 249 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 H0YGG7 62 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 LCMT2O60294 686 aaKnown RBP10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 SNX3O60493 162 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 CTSVO60911 334 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 TGFB1P01137 390 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 FTH1P19P0C7X4 201 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 PIM1P11309 404 aaPredicted RBP10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 PRPS2P11908 318 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 HOXB3P14651 431 aaPredicted RBP10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 DRD4P21917 467 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 RPL3P39023 403 aaKnown RBP10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 ASMTP46597 345 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 AVPR1BP47901 424 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 LSSP48449 732 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 ARF3P61204 181 aaPredicted RBP10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 ERVK-8P63133 956 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 CYP4F2P78329 520 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 SIM1P81133 766 aaPredicted RBP10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 CFHR1Q03591 330 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 FOXM1Q08050 763 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 FAM53BQ14153 422 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 GSTA3Q16772 222 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 GALNTL6Q49A17 601 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 XKR7Q5GH72 579 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 TOR1AIP1Q5JTV8 583 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 WASHC2DQ5SRD0 308 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 OGFOD2Q6N063 350 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 CYP20A1Q6UW02 462 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 CEACAM20Q6UY09 585 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 TMPRSS12Q86WS5 348 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 ZFAND4Q86XD8 727 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 PPP1R3BQ86XI6 285 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 PLD3Q8IV08 490 aa10.53□□□□□ -0.72
SNORD3D-201ENST00000619178 FNDC5Q8NAU1 212 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms