RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 TFCP2L1Q9NZI6 479 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 EPHA6Q9UF33 1036 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SLC12A6Q9UHW9 1150 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SLCO3A1Q9UIG8 710 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 PADI1Q9ULC6 663 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SPEF2Q9C093 1822 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 TRABD2BA6NFA1 517 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MAGEB17A8MXT2 336 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NEDD8-MDP1E9PL57 170 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 RNF225M0QZC1 329 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 PDE9AO76083 593 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 UPP2O95045 317 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SERPINB2P05120 415 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 EPHX1P07099 455 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 HOXD4P09016 255 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 RBP1P09455 135 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NBEAP1P0C6P0 100 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 CYP2C8P10632 490 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ESRRAP11474 423 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 TYRP14679 529 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 GRK4P32298 578 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 FRKP42685 505 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SLC1A2P43004 574 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 CACNA2D1P54289 1103 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ZNF91Q05481 1191 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 RIPPLY1Q0D2K3 151 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MMRN1Q13201 1228 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 TOP3AQ13472 1001 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NAE1Q13564 534 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SLC17A1Q14916 467 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 EMC2Q15006 297 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MEDAGQ5VYS4 303 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ZBTB49Q6ZSB9 765 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 RTN4RL2Q86UN3 420 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 KLBQ86Z14 1044 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SPNS2Q8IVW8 549 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 TDHQ8IZJ6 230 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 C17orf78Q8N4C9 275 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 FRMD1Q8N878 549 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 CYB561A3Q8NBI2 242 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 TP53I13Q8NBR0 393 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 PAPD5Q8NDF8 572 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NFKBIDQ8NI38 313 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NUDT11Q96G61 164 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ZNF597Q96LX8 424 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ZNF285Q96NJ3 590 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 OR5M11Q96RB7 305 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MMP19Q99542 508 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SLC30A3Q99726 388 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 P2RY12Q9H244 342 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 COG4Q9H9E3 785 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NECTIN3Q9NQS3 549 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NLGN3Q9NZ94 848 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ADAM22Q9P0K1 906 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 PTGFRNQ9P2B2 879 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 RBPJLQ9UBG7 517 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NDRG3Q9UGV2 375 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 GPN3Q9UHW5 284 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ARL2BPQ9Y2Y0 163 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NEU2Q9Y3R4 380 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 TRAF6Q9Y4K3 522 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 LIPGQ9Y5X9 500 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ABCC4O15439 1325 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ARHGAP42A6NI28 874 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 BECN2A8MW95 431 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 K7EQM0 130 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SURF4O15260 269 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 LANCL1O43813 399 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 RGS9O75916 674 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 DFFBO76075 338 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 B3GAT3O94766 335 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MBD3O95983 291 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MELTFP08582 738 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SBK2P0C263 348 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 THRAP10827 490 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SLC2A1P11166 492 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ITPKAP23677 461 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 POU1F1P28069 291 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 OTX1P32242 354 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 BSGP35613 385 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ETV4P43268 484 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NAMPTP43490 491 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 CDH13P55290 713 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SNU13P55769 128 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SIM1P81133 766 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MRPS11P82912 194 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 CNTN2Q02246 1040 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 AIMP2Q13155 320 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 CST9LP1Q5W188 147 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 CERS6Q6ZMG9 384 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 UNC5AQ6ZN44 842 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 TRIM46Q7Z4K8 759 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 POLNQ7Z5Q5 900 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MYPOPQ86VE0 399 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 PI4KAP1Q8N8J0 262 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 POC5Q8NA72 575 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 GRAPLQ8TC17 118 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 LRRC20Q8TCA0 184 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms