RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FETUBQ9UGM5 382 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 INTUQ9ULD6 942 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 SLC39A10Q9ULF5 831 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 TDRKHQ9Y2W6 561 aaKnown RBP4.26□□□□□ -1.73
SNCA-213ENST00000618500 PRSS21Q9Y6M0 314 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 NDC80O14777 642 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 MAN1A2O60476 641 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 LOXP28300 417 aaPredicted RBP4.26□□□□□ -1.73
SNCA-213ENST00000618500 SSR4P51571 173 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 HERC3Q15034 1050 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 ACSF3Q4G176 576 aaPredicted RBP4.26□□□□□ -1.73
SNCA-213ENST00000618500 ICE2Q659A1 982 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 HMBOX1Q6NT76 420 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 ARHGEF18Q6ZSZ5 1173 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 LANCL3Q6ZV70 420 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 SEM1Q6ZVN7 128 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 P3H2Q8IVL5 708 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 KATNAL2Q8IYT4 538 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 ULK2Q8IYT8 1036 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 MEIOBQ8N635 442 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 CAMKVQ8NCB2 501 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 IPMKQ8NFU5 416 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 OR13C4Q8NGS5 318 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 VMP1Q96GC9 406 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 Q96MF0 132 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 SFXN3Q9BWM7 321 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 NPLQ9BXD5 320 aaPredicted RBP4.26□□□□□ -1.73
SNCA-213ENST00000618500 LRRC40Q9H9A6 602 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 MRPS30Q9NP92 439 aaKnown RBP4.26□□□□□ -1.73
SNCA-213ENST00000618500 PRDM9Q9NQV7 894 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 KIAA1549Q9HCM3 1950 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 SETD2Q9BYW2 2564 aaPredicted RBP4.26□□□□□ -1.73
SNCA-213ENST00000618500 EML6Q6ZMW3 1958 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 ERI2A8K979 691 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 PES1O00541 588 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 DDX3YO15523 660 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 P2RX6O15547 441 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 CRHP06850 196 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 FAM157CP0CG43 387 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 MPC1LP0DKB6 136 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 CTSSP25774 331 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 GSTM2P28161 218 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 SLC6A12P48065 614 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 PTH2RP49190 550 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 OR4D2P58180 307 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 PPIAP62937 165 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 PWP1Q13610 501 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 MAPKAPK3Q16644 382 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 ZNF468Q5VIY5 522 aaPredicted RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 E4F1Q66K89 784 aaPredicted RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 TMEM81Q6P7N7 255 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 LRRC8BQ6P9F7 803 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 BBS12Q6ZW61 710 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 SCUBE1Q8IWY4 988 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 RHOT2Q8IXI1 618 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 CYP4Z2PQ8N1L4 340 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 RPRMLQ8N4K4 120 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 SLC25A41Q8N5S1 370 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 MFSD9Q8NBP5 474 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 OR52N2Q8NGI0 321 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 OR9A1PQ8NGU1 263 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 GTPBP3Q969Y2 492 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 ZMYND19Q96E35 227 aaPredicted RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 SGCZQ96LD1 299 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 ACBD3Q9H3P7 528 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 PLAGL1Q9UM63 463 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 SVILO95425 2214 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 MDC1Q14676 2089 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 ANKRD33BA6NCL7 494 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 TMCO5BA8MYB1 307 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 APOC4-APOC2K7ER74 178 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 STK10O94804 968 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 AGTP01019 485 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 APOC2P02655 101 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 FHP07954 510 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 CRYGSP22914 178 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 CCND1P24385 295 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 PCSK6P29122 969 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 RPA3P35244 121 aaPredicted RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 MAN2A2P49641 1150 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 GPR143P51810 404 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 FGFBP1Q14512 234 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 HKDC1Q2TB90 917 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 ANKRD20A4Q4UJ75 823 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 ANKRD20A2Q5SQ80 823 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 RNF187Q5TA31 235 aaPredicted RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 ANKRD20A1Q5TYW2 823 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 ANKRD20A3Q5VUR7 823 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 ADAM5Q6NVV9 412 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 C16orf47Q6ZP98 133 aaPredicted RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 LINC00523Q86TU6 105 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 RFX6Q8HWS3 928 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 PIANPQ8IYJ0 282 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 LRRC25Q8N386 305 aaPredicted RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 METTL27Q8N6F8 245 aaPredicted RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 APCDD1LQ8NCL9 501 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 PSD4Q8NDX1 1056 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 B3GNT7Q8NFL0 401 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms