RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 PARS2Q7L3T8 475 aaKnown RBP11.65□□□□□ -0.54
SRRT-216ENST00000618262 DPPA2Q7Z7J5 298 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.65□□□□□ -0.54
SRRT-216ENST00000618262 MDGA1Q8NFP4 955 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 RFKQ969G6 155 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 ZNF599Q96NL3 588 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 EDEM2Q9BV94 578 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 AP4B1Q9Y6B7 739 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 A0A1B0GV90 55 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 ANKRD66B4E2M5 251 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 CLDN25C9JDP6 229 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 NOL3O60936 208 aaKnown RBP11.65□□□□□ -0.54
SRRT-216ENST00000618262 PCDH8O95206 1070 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 OPN1MWP04001 364 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 ATXN1LP0C7T5 689 aaKnown RBP11.65□□□□□ -0.54
SRRT-216ENST00000618262 OPN1MW2P0DN77 364 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 OPN1MW3P0DN78 364 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 MAPK3P27361 379 aaPredicted RBP11.65□□□□□ -0.54
SRRT-216ENST00000618262 PIK3R1P27986 724 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 GEMP55040 296 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 MTAPQ13126 283 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 KCNAB1Q14722 419 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 STARD3Q14849 445 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 MLC1Q15049 377 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 KCTD11Q693B1 232 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 ESRP1Q6NXG1 681 aaKnown RBP11.65□□□□□ -0.54
SRRT-216ENST00000618262 ATG14Q6ZNE5 492 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 HDDC3Q8N4P3 179 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 NANPQ8TBE9 248 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 WFIKKN2Q8TEU8 576 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 C10orf82Q8WW14 230 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 ARRDC3Q96B67 414 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 TXLNGYQ9BZA5 131 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 LTB4R2Q9NPC1 389 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 FZD3Q9NPG1 666 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 GSN-AS1Q9NRJ2 163 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 PCDHGB4Q9UN71 923 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 DOCK9Q9BZ29 2069 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 TRBV23-1A0A0A0MS06 115 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 TMX2-CTNND1H3BSU7 103 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 H7C0S8 307 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 CBR3O75828 277 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 ERVK-10P10266 1014 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 CD247P20963 164 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 DRD1P21728 446 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 DHPSP49366 369 aaPredicted RBP11.64□□□□□ -0.55
SRRT-216ENST00000618262 PPP1R3AQ16821 1122 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 ZFP69Q49AA0 526 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 SLC25A24Q6NUK1 477 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 HDDC2Q7Z4H3 204 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 MTDHQ86UE4 582 aaKnown RBP11.64□□□□□ -0.55
SRRT-216ENST00000618262 TIGD4Q8IY51 512 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 PCDH20Q8N6Y1 951 aaKnown RBP11.64□□□□□ -0.55
SRRT-216ENST00000618262 OR14C36Q8NHC7 312 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 DNASE1L2Q92874 299 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 EID2BQ96D98 161 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 ELP4Q96EB1 424 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 OMDQ99983 421 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 PARD6GQ9BYG4 376 aaPredicted RBP11.64□□□□□ -0.55
SRRT-216ENST00000618262 ACTR6Q9GZN1 396 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 CDC42EP4Q9H3Q1 356 aaKnown RBP11.64□□□□□ -0.55
SRRT-216ENST00000618262 LRRC40Q9H9A6 602 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 HMG20AQ9NP66 347 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 SLC2A4RGQ9NR83 387 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 ARL8BQ9NVJ2 186 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 WHRNQ9P202 907 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 PHTF1Q9UMS5 762 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 SIT1Q9Y3P8 196 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 MMP20O60882 483 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 FAM155BO75949 473 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 GNSP15586 552 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 CYP2A7P20853 494 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 SAT1P21673 171 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 ARL4CP56559 192 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 GLO1Q04760 184 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 ELAVL3Q14576 367 aaKnown RBP11.64□□□□□ -0.55
SRRT-216ENST00000618262 EIF4HQ15056 248 aaKnown RBP11.64□□□□□ -0.55
SRRT-216ENST00000618262 FGD3Q5JSP0 725 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 TMEM65Q6PI78 240 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 GLT6D1Q7Z4J2 308 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 PRSS42Q7Z5A4 293 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 PTAR1Q7Z6K3 402 aaPredicted RBP11.64□□□□□ -0.55
SRRT-216ENST00000618262 ARMC8Q8IUR7 673 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 PRSS58Q8IYP2 241 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 LIX1Q8N485 282 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 ARL14Q8N4G2 192 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 TTC29Q8NA56 475 aaPredicted RBP11.64□□□□□ -0.55
SRRT-216ENST00000618262 CHAC2Q8WUX2 184 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 OR8D1Q8WZ84 308 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 SCAMP4Q969E2 229 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 APOPT1Q96IL0 206 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 FCRL3Q96P31 734 aaPredicted RBP11.64□□□□□ -0.55
SRRT-216ENST00000618262 GPR63Q9BZJ6 419 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 DYRK4Q9NR20 520 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 FBXL12Q9NXK8 326 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 NKIRAS1Q9NYS0 192 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 ADAMTS6Q9UKP5 1117 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 GPR179Q6PRD1 2367 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 ABCA7Q8IZY2 2146 aa11.64□□□□□ -0.55
SRRT-216ENST00000618262 EDDM13A0A1B0GTR0 161 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms