RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 C3orf18Q9UK00 162 aa23.59■■□□□ 1.37
PMS1-220ENST00000618056 G3BP2Q9UN86 482 aaKnown RBP23.59■■□□□ 1.37
PMS1-220ENST00000618056 SYCE1LA8MT33 242 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 DYNC1I1O14576 645 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 FFAR3O14843 346 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 GPR42O15529 346 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 KRT38O76015 456 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 KLHL2O95198 593 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 PDGFAP04085 211 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 PLA2G2AP14555 144 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 NR1D1P20393 614 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 MSH2P43246 934 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 PGDP52209 483 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 SYT16Q17RD7 645 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 FBXO48Q5FWF7 155 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 ZC3H7AQ8IWR0 971 aaKnown RBP23.58■■□□□ 1.37
PMS1-220ENST00000618056 PRSS58Q8IYP2 241 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 UBTD2Q8WUN7 234 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 DCAKDQ8WVC6 231 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 EXT2Q93063 718 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 ESAMQ96AP7 390 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 CD244Q9BZW8 370 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 ATP13A2Q9NQ11 1180 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 GPR83Q9NYM4 423 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 FBXL4Q9UKA2 621 aa23.58■■□□□ 1.37
PMS1-220ENST00000618056 IDSB3KWA1 339 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 UBXN8O00124 270 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 PCDH17O14917 1159 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 H2AFYO75367 372 aaKnown RBP23.57■■□□□ 1.36
PMS1-220ENST00000618056 BMP10O95393 424 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 MTHFD2P13995 350 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 MAT1AQ00266 395 aaKnown RBP23.57■■□□□ 1.36
PMS1-220ENST00000618056 PDK4Q16654 411 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 NIPAL1Q6NVV3 410 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 LRRC70Q7Z2Q7 622 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 PDSS2Q86YH6 399 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 GALNT16Q8N428 558 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 TTLQ8NG68 377 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 OR11G2Q8NGC1 345 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 WDR34Q96EX3 536 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 SEC16BQ96JE7 1060 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 GPR78Q96P69 363 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 TXLNGYQ9BZA5 131 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 NT5DC2Q9H857 520 aa23.57■■□□□ 1.36
PMS1-220ENST00000618056 SUPT3HB4E1H0 165 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 POC1B-GALNT4F8VUJ3 575 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 SLC28A2O43868 658 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 SUPT3HO75486 399 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 GSTM2P28161 218 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 EMP2P54851 167 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 SKP1P63208 163 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 KLRB1Q12918 225 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 AIMP2Q13155 320 aaKnown RBP23.56■■□□□ 1.36
PMS1-220ENST00000618056 RBBP5Q15291 538 aaKnown RBP23.56■■□□□ 1.36
PMS1-220ENST00000618056 TUBB8Q3ZCM7 444 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 KLC3Q6P597 504 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 TMIGD1Q6UXZ0 262 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 ATG14Q6ZNE5 492 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 UHMK1Q8TAS1 419 aaKnown RBP23.56■■□□□ 1.36
PMS1-220ENST00000618056 CREB3L4Q8TEY5 395 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 SMAD5Q99717 465 aaKnown RBP23.56■■□□□ 1.36
PMS1-220ENST00000618056 NUDT9Q9BW91 350 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 SLC6A16Q9GZN6 736 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 NAALAD2Q9Y3Q0 740 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 ZNF451Q9Y4E5 1061 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 RP1L1Q8IWN7 2480 aaPredicted RBP23.56■■□□□ 1.36
PMS1-220ENST00000618056 EXOC1LA0A1B0GW35 172 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 A0A1W2PQ72 361 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 URADA6NGE7 173 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 A6NL46 340 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 SGK494L7N484 410 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 MAP2K7O14733 419 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 CLGNO14967 610 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 RIPK2O43353 540 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 KLHL18O94889 574 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 SLU7O95391 586 aaKnown RBP23.56■■□□□ 1.36
PMS1-220ENST00000618056 SERPIND1P05546 499 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 SERPINA6P08185 405 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 CYC1P08574 325 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 FAM153BP0C7A2 387 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 ALOX12P18054 663 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 HYAL2Q12891 473 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 E2F2Q14209 437 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 SLBPQ14493 270 aaKnown RBP eCLIP23.56■■□□□ 1.36
PMS1-220ENST00000618056 MYBPC3Q14896 1274 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 FAM153CQ494X1 144 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 ABHD13Q7L211 337 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 PRICKLE2Q7Z3G6 844 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 KRT78Q8N1N4 520 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 SNX31Q8N9S9 440 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 ASB1Q9Y576 335 aa23.56■■□□□ 1.36
PMS1-220ENST00000618056 MYO18BQ8IUG5 2567 aa23.55■■□□□ 1.36
PMS1-220ENST00000618056 CTIFO43310 598 aaKnown RBP23.55■■□□□ 1.36
PMS1-220ENST00000618056 CCNT2O60583 730 aaKnown RBP23.55■■□□□ 1.36
PMS1-220ENST00000618056 KLHL41O60662 606 aa23.55■■□□□ 1.36
PMS1-220ENST00000618056 GALR3O60755 368 aaPredicted RBP23.55■■□□□ 1.36
PMS1-220ENST00000618056 PRAMEF4O60810 478 aa23.55■■□□□ 1.36
PMS1-220ENST00000618056 HEXBP07686 556 aa23.55■■□□□ 1.36
PMS1-220ENST00000618056 ACPPP15309 386 aa23.55■■□□□ 1.36
PMS1-220ENST00000618056 GLRBP48167 497 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms