RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 FAM149AA5PLN7 773 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 NPIPB15A6NHN6 443 aaPredicted RBP12.62□□□□□ -0.39
FOXN3-219ENST00000615335 LEUTXA8MZ59 168 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 SUPT3HB4E1H0 165 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 VPS4BO75351 444 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 CRCPO75575 148 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 ICAM2P13598 275 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 TIMP2P16035 220 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 ERP29P30040 261 aaKnown RBP12.62□□□□□ -0.39
FOXN3-219ENST00000615335 PRKCDQ05655 676 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 FAM46CQ5VWP2 391 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 LCN8Q6JVE9 175 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 PARS2Q7L3T8 475 aaKnown RBP12.62□□□□□ -0.39
FOXN3-219ENST00000615335 PLD3Q8IV08 490 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 LIX1LQ8IVB5 337 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 OR4L1Q8NH43 312 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 ZFAND1Q8TCF1 268 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 SGCDQ92629 289 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 LRRC58Q96CX6 371 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 RSPH9Q9H1X1 276 aaPredicted RBP12.62□□□□□ -0.39
FOXN3-219ENST00000615335 IFT22Q9H7X7 185 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 ACTR3BQ9P1U1 418 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 EIF3KQ9UBQ5 218 aaKnown RBP12.62□□□□□ -0.39
FOXN3-219ENST00000615335 MUTYHQ9UIF7 546 aa12.62□□□□□ -0.39
FOXN3-219ENST00000615335 A0A0C4DFX4 3053 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 PABPN1LA6NDY0 278 aaKnown RBP12.61□□□□□ -0.39
FOXN3-219ENST00000615335 UPK3BL1B0FP48 263 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 UPK3BL2E5RIL1 263 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 FXYD1O00168 92 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 STK25O00506 426 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 CAPN5O15484 640 aaPredicted RBP12.61□□□□□ -0.39
FOXN3-219ENST00000615335 CLDN7O95471 211 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 PCMT1P22061 227 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 LPOP22079 712 aaPredicted RBP12.61□□□□□ -0.39
FOXN3-219ENST00000615335 ITGB7P26010 798 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 FOXM1Q08050 763 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 SNTA1Q13424 505 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 SPATS1Q496A3 300 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 EOGTQ5NDL2 527 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 TTC23Q5W5X9 447 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 PRR23BQ6ZRT6 265 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 UTS2BQ765I0 119 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 UBALD2Q8IYN6 164 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 TBC1D21Q8IYX1 336 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 FBXO39Q8N4B4 442 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 OR4K2Q8NGD2 314 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 STAG3L4Q8TBR4 150 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 RDH12Q96NR8 316 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 ZNF300Q96RE9 604 aaPredicted RBP12.61□□□□□ -0.39
FOXN3-219ENST00000615335 MCCC1Q96RQ3 725 aaPredicted RBP12.61□□□□□ -0.39
FOXN3-219ENST00000615335 NODALQ96S42 347 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 APOL4Q9BPW4 351 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 LMAN1LQ9HAT1 526 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 BPIFA1Q9NP55 256 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 ZC4H2Q9NQZ6 224 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 RNF112Q9ULX5 631 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 PPIL1Q9Y3C6 166 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 A0A1W2PQF6 199 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 TSPAN11A1L157 253 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 KRT87PA6NCN2 255 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 STX7O15400 261 aaKnown RBP12.61□□□□□ -0.39
FOXN3-219ENST00000615335 KERAO60938 352 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 RHOBTB1O94844 696 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 PDGFAP04085 211 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 IFNA16P05015 189 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 SLC6A2P23975 617 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 SHMT2P34897 504 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 STC1P52823 247 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 EPS8Q12929 822 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 LCP2Q13094 533 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 CST6Q15828 149 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 TBRG1Q3YBR2 411 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 ZNF404Q494X3 552 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 COQ5Q5HYK3 327 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 C6orf141Q5SZD1 244 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 BLOC1S3Q6QNY0 202 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 CRTC1Q6UUV9 634 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 Q6ZS52 159 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 TSPAN33Q86UF1 283 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 KIAA1191Q96A73 305 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 ARRDC3Q96B67 414 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 YIPF6Q96EC8 236 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 DMRTB1Q96MA1 342 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 LYSMD1Q96S90 227 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 MUC13Q9H3R2 512 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 SEMA4BQ9NPR2 832 aaPredicted RBP12.61□□□□□ -0.39
FOXN3-219ENST00000615335 GLTPQ9NZD2 209 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 B4GALT6Q9UBX8 382 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 FNDC3AQ9Y2H6 1198 aaKnown RBP12.61□□□□□ -0.39
FOXN3-219ENST00000615335 PKP3Q9Y446 797 aa12.61□□□□□ -0.39
FOXN3-219ENST00000615335 UBA6A0AVT1 1052 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 ARPC2O15144 300 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 MID1O15344 667 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 TPST1O60507 370 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 NCOR1O75376 2440 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 INMTO95050 263 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 LDLRP01130 860 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 HTR1AP08908 422 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 ITGA2P17301 1181 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 CHRM3P20309 590 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms