RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 PLCL1Q15111 1095 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 TMEM31Q5JXX7 168 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 PRAMEF14Q5SWL7 426 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 PRAMEF13Q5VWM6 474 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 TBC1D3GQ6DHY5 549 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 TBC1D3CQ6IPX1 549 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 ARMCX6Q7L4S7 300 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 LAS2Q8IYD9 372 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 TBC1D3Q8IZP1 549 aaPredicted RBP18.37■□□□□ 0.53
MMP28-204ENST00000615136 NCLNQ969V3 563 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 ISOC1Q96CN7 298 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 OR51B5Q9H339 312 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 UTS2RQ9UKP6 389 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 MTCH2Q9Y6C9 303 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 SLC31A1O15431 190 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 LAMP1P11279 417 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 MYCLP1P12525 358 aaPredicted RBP18.37■□□□□ 0.53
MMP28-204ENST00000615136 PRPS1L1P21108 318 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 KELP23276 732 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 SHMT2P34897 504 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 KIR3DL1P43629 444 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 MYBPC3Q14896 1274 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 MLF2Q15773 248 aaPredicted RBP18.37■□□□□ 0.53
MMP28-204ENST00000615136 DPY19L1Q2PZI1 675 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 HKDC1Q2TB90 917 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 ZIK1Q3SY52 487 aaPredicted RBP18.37■□□□□ 0.53
MMP28-204ENST00000615136 VN1R5Q7Z5H4 357 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 CLVS1Q8IUQ0 354 aaPredicted RBP18.37■□□□□ 0.53
MMP28-204ENST00000615136 CLECL1Q8IZS7 167 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 ZCCHC7Q8N3Z6 543 aaKnown RBP18.37■□□□□ 0.53
MMP28-204ENST00000615136 INSM2Q96T92 566 aaPredicted RBP18.37■□□□□ 0.53
MMP28-204ENST00000615136 OSGEPL1Q9H4B0 414 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 DMRT3Q9NQL9 472 aa18.37■□□□□ 0.53
MMP28-204ENST00000615136 PHPT1Q9NRX4 125 aaPredicted RBP18.37■□□□□ 0.53
MMP28-204ENST00000615136 IFT80Q9P2H3 777 aaPredicted RBP18.37■□□□□ 0.53
MMP28-204ENST00000615136 EXO1Q9UQ84 846 aaKnown RBP18.37■□□□□ 0.53
MMP28-204ENST00000615136 PRMT3O60678 531 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 ANXA4P09525 319 aaPredicted RBP18.36■□□□□ 0.53
MMP28-204ENST00000615136 ERGP11308 486 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 COX7A2P14406 83 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 IST1P53990 364 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 CTBSQ01459 385 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 TFF2Q03403 129 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 SDE2Q6IQ49 451 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 NETO1Q8TDF5 533 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 NELL1Q92832 810 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 RBM4BQ9BQ04 359 aaKnown RBP18.36■□□□□ 0.53
MMP28-204ENST00000615136 EFCAB11Q9BUY7 163 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 RBM4Q9BWF3 364 aaKnown RBP18.36■□□□□ 0.53
MMP28-204ENST00000615136 TOR3AQ9H497 397 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 CUEDC1Q9NWM3 386 aaPredicted RBP18.36■□□□□ 0.53
MMP28-204ENST00000615136 TAC3Q9UHF0 121 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 CA5BQ9Y2D0 317 aa18.36■□□□□ 0.53
MMP28-204ENST00000615136 PRAMEF33A0A0G2JMD5 474 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 C2CD4DB7Z1M9 353 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 RFXANKO14593 260 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 PI15O43692 258 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 KLHL18O94889 574 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 CPNE6O95741 557 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 SERPINA1P01009 418 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 PMS2P3Q13401 168 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 TTC23Q5W5X9 447 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 HORMAD1Q86X24 394 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 ADHFE1Q8IWW8 467 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 WDR48Q8TAF3 677 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 ZNF420Q8TAQ5 688 aaPredicted RBP18.35■□□□□ 0.53
MMP28-204ENST00000615136 MBOAT4Q96T53 435 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 DOK1Q99704 481 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 MOSPD1Q9UJG1 213 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 DNMT3AQ9Y6K1 912 aaPredicted RBP18.35■□□□□ 0.53
MMP28-204ENST00000615136 GABRR3A8MPY1 467 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 SLC35G4P0C7Q5 338 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 CDK4P11802 303 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 TEAD1P28347 426 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 MAGEA2P43356 314 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 TRPC1P48995 793 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 C21orf58P58505 322 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 LAPTM5Q13571 262 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 RAB39AQ14964 217 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 KIAA1161Q6NSJ0 714 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 ZNF773Q6PK81 442 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 LCTLQ6UWM7 567 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 TMEM92Q6UXU6 159 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 SERPINA11Q86U17 422 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 FAM129CQ86XR2 697 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 LINC01555Q8NAE3 123 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 OR5K1Q8NHB7 308 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 EHD1Q9H4M9 534 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 POLR1BQ9H9Y6 1135 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 LIN28AQ9H9Z2 209 aaKnown RBP18.35■□□□□ 0.53
MMP28-204ENST00000615136 EBF1Q9UH73 591 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 SLC17A4Q9Y2C5 497 aa18.35■□□□□ 0.53
MMP28-204ENST00000615136 A0A1W2PPV9 198 aa18.34■□□□□ 0.53
MMP28-204ENST00000615136 POM121BA6NF01 834 aa18.34■□□□□ 0.53
MMP28-204ENST00000615136 SCAMP2O15127 329 aaKnown RBP18.34■□□□□ 0.53
MMP28-204ENST00000615136 TBX6O95947 436 aaPredicted RBP18.34■□□□□ 0.53
MMP28-204ENST00000615136 DCKP27707 260 aa18.34■□□□□ 0.53
MMP28-204ENST00000615136 ELK4P28324 431 aa18.34■□□□□ 0.53
MMP28-204ENST00000615136 TIA1P31483 386 aaKnown RBP eCLIP18.34■□□□□ 0.53
MMP28-204ENST00000615136 YAP1P46937 504 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms