RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 FBXO5Q9UKT4 447 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 SCML1Q9UN30 329 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 PLLPQ9Y342 182 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 PCDHGC4Q9Y5F7 938 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 CROCCQ5TZA2 2017 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 PQLC2LA1A4F0 135 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 TARM1B6A8C7 271 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 F5H423 210 aaPredicted RBP8.51□□□□□ -1.05
VPS11-206ENST00000614944 GLRA3O75311 464 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 GJB3O75712 270 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 KAT7O95251 611 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 LDOC1O95751 146 aaPredicted RBP8.51□□□□□ -1.05
VPS11-206ENST00000614944 S1PR4O95977 384 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 PTTG1O95997 202 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 APOA1P02647 267 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 ERVK-10P10266 1014 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 IL7P13232 177 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 ETV4P43268 484 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 SLC15A1P46059 708 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 STK19P49842 368 aaPredicted RBP8.51□□□□□ -1.05
VPS11-206ENST00000614944 STC1P52823 247 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 PSMD4P55036 377 aaKnown RBP8.51□□□□□ -1.05
VPS11-206ENST00000614944 CASP9P55211 416 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 CASP6P55212 293 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 MRPS21P82921 87 aaKnown RBP8.51□□□□□ -1.05
VPS11-206ENST00000614944 FOXK1P85037 733 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 KRR1Q13601 381 aaKnown RBP8.51□□□□□ -1.05
VPS11-206ENST00000614944 GPR68Q15743 365 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 TMEM196Q5HYL7 178 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 FAM45BPQ6NSW5 357 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 FAM45AQ8TCE6 357 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 CSGALNACT1Q8TDX6 532 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 HEXDCQ8WVB3 486 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 ELP4Q96EB1 424 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 PPP1R16AQ96I34 528 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 ST6GAL2Q96JF0 529 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 CCM2Q9BSQ5 444 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 BDH2Q9BUT1 245 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 PAPOLGQ9BWT3 736 aaKnown RBP8.51□□□□□ -1.05
VPS11-206ENST00000614944 SEMA6AQ9H2E6 1030 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 GLRX2Q9NS18 164 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 CATSPERZQ9NTU4 200 aa8.51□□□□□ -1.05
VPS11-206ENST00000614944 CHTOPQ9Y3Y2 248 aaKnown RBP8.51□□□□□ -1.05
VPS11-206ENST00000614944 TRBV23OR9-2A0A075B6M9 112 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 UPK3BL1B0FP48 263 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 LOC730098B7Z3J9 87 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 TRIM49D1C9J1S8 452 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 UPK3BL2E5RIL1 263 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CRTAPO75718 401 aaPredicted RBP8.5□□□□□ -1.05
VPS11-206ENST00000614944 TIMP2P16035 220 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 PDHA2P29803 388 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 GDI1P31150 447 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 SLC1A2P43004 574 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 KIR2DL1P43626 348 aaPredicted RBP8.5□□□□□ -1.05
VPS11-206ENST00000614944 HTR3AP46098 478 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 SLC6A11P48066 632 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 TTPAP49638 278 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 KPNA2P52292 529 aaKnown RBP8.5□□□□□ -1.05
VPS11-206ENST00000614944 MAPK10P53779 464 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CARD18P57730 90 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 TBCCQ15814 346 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 SSX2Q16385 188 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 TXNDC11Q6PKC3 985 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 OR4M2Q8NGB6 313 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 NANPQ8TBE9 248 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ZFP90Q8TF47 636 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 SLC5A11Q8WWX8 675 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 TCEAL3Q969E4 200 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 MAGED4Q96JG8 741 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ZNF778Q96MU6 729 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 BCL7BQ9BQE9 202 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CAB39LQ9H9S4 337 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CDH22Q9UJ99 828 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 MID2Q9UJV3 735 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 PCDHB9Q9Y5E1 797 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 PCDHB1Q9Y5F3 818 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 PCDHGA9Q9Y5G4 932 aaKnown RBP8.5□□□□□ -1.05
VPS11-206ENST00000614944 IGLV3-16A0A075B6K0 115 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 C10orf142B7Z368 130 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CD3EAPO15446 510 aaKnown RBP8.5□□□□□ -1.05
VPS11-206ENST00000614944 VAPBO95292 243 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ALDOAP04075 364 aaKnown RBP8.5□□□□□ -1.05
VPS11-206ENST00000614944 JUPP14923 745 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CHMP24386 653 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 PTAFRP25105 342 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 PGDP52209 483 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 OR2B6P58173 313 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ELP6Q0PNE2 266 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ZNF234Q14588 700 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ZNF169Q14929 603 aaPredicted RBP8.5□□□□□ -1.05
VPS11-206ENST00000614944 TCTE1Q5JU00 501 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 FSTL4Q6MZW2 842 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CTAGE3PQ8IX95 158 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 LIX1Q8N485 282 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 OXR1Q8N573 874 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 SERAC1Q96JX3 654 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 RNF170Q96K19 258 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 P2RY13Q9BPV8 354 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 KXD1Q9BQD3 176 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ZNF251Q9BRH9 671 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms