RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 OR3A3P47888 321 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 PLCZ1Q86YW0 608 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 P3H2Q8IVL5 708 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 FAM217AQ8IXS0 508 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 CDYL2Q8N8U2 506 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 TRMT61BQ9BVS5 477 aaKnown RBP21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 DYRK4Q9NR20 520 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 SPHK2Q9NRA0 654 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 TMEM248Q9NWD8 314 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 MYO10Q9HD67 2058 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 SSX4O60224 188 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 CD72P21854 359 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 MLLT3P42568 568 aaPredicted RBP21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 GZMMP51124 257 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 RENBPP51606 427 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 AP2S1P53680 142 aaPredicted RBP21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 SEMA3AQ14563 771 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 TSNQ15631 228 aaKnown RBP21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 PUS10Q3MIT2 529 aaKnown RBP21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 GPAT3Q53EU6 434 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 CARD16Q5EG05 197 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 MSRB3Q8IXL7 192 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 CARNMT1Q8N4J0 409 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 APH1BQ8WW43 257 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 COL21A1Q96P44 957 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 FAM83CQ9BQN1 747 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 ATP13A2Q9NQ11 1180 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 CLEC4EQ9ULY5 219 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 GPSM3Q9Y4H4 160 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 NYNRINQ9P2P1 1898 aaKnown RBP21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 SLC9A3R1O14745 358 aaPredicted RBP21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 DPM1O60762 260 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 ERN1O75460 977 aaKnown RBP21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 RPP40O75818 363 aaKnown RBP21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 DHCR24Q15392 516 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 ARMCX4Q5H9R4 360 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 ARMC4Q5T2S8 1044 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 RNF165Q6ZSG1 346 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 FAM20CQ8IXL6 584 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 ZFAND1Q8TCF1 268 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 NETO1Q8TDF5 533 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 IRF7Q92985 503 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 DMRTB1Q96MA1 342 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 TTYH2Q9BSA4 534 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 BBS2Q9BXC9 721 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 IL1RAPQ9NPH3 570 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 KRT84Q9NSB2 600 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 SLC25A37Q9NYZ2 338 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 AASSQ9UDR5 926 aa21.16■□□□□ 0.98
POLR2J3-220ENST00000613744 E2F3O00716 465 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 RHOBTB1O94844 696 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 CYP17A1P05093 508 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 STC1P52823 247 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 NR6A1Q15406 480 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 AP5B1Q2VPB7 878 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 TIGD3Q6B0B8 471 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 FAHD1Q6P587 224 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 ZNF767PQ75MW2 155 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 CEP68Q76N32 757 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 CPXM2Q8N436 756 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 SLC44A3Q8N4M1 653 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 ZNF675Q8TD23 568 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 DNASE1L2Q92874 299 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 NACC2Q96BF6 587 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 FAM120BQ96EK7 910 aaKnown RBP21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 HRASLS5Q96KN8 279 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 TBATAQ96M53 351 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 GABARAPL3Q9BY60 117 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 IKZF5Q9H5V7 419 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 PLSCR3Q9NRY6 295 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 CATSPERZQ9NTU4 200 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 GALPQ9UBC7 116 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 BOLA1Q9Y3E2 137 aa21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 POLR3HQ9Y535 204 aaPredicted RBP21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 TCF20Q9UGU0 1960 aaKnown RBP21.15■□□□□ 0.98
POLR2J3-220ENST00000613744 TEX51A0A1B0GUA7 166 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 OR51F1A6NGY5 319 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 WASH4PA8MWX3 477 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 GFRA2O00451 464 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 ARHGEF9O43307 516 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 PCDHGA12O60330 932 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 TRIM3O75382 744 aaPredicted RBP21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 CCNDBP1O95273 360 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 CA5AP35218 305 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 RFX2P48378 723 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 PXNP49023 591 aaPredicted RBP21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 HSPA14Q0VDF9 509 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 EIF4HQ15056 248 aaKnown RBP21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 PAQR3Q6TCH7 311 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 ENTHD1Q8IYW4 607 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 TCTE3Q8IZS6 198 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 PGBD3Q8N328 593 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 WFDC5Q8TCV5 224 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 TADA1Q96BN2 335 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 CPPED1Q9BRF8 314 aaPredicted RBP21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 TBCDQ9BTW9 1192 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 BRD9Q9H8M2 597 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 ASIC5Q9NY37 505 aa21.14■□□□□ 0.98
POLR2J3-220ENST00000613744 TRIOO75962 3097 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms