RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 PCDHGB3Q9Y5G1 929 aa13.92□□□□□ -0.18
SMG9-211ENST00000601170 MKI67P46013 3256 aaKnown RBP13.92□□□□□ -0.18
SMG9-211ENST00000601170 SLC5A10A0PJK1 596 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 OR2A25A4D2G3 310 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 NPC1O15118 1278 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 CCL16O15467 120 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 ATG13O75143 517 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TYRP14679 529 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 CD36P16671 472 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TNFRSF1BP20333 461 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 PBLDP30039 288 aaPredicted RBP13.91□□□□□ -0.18
SMG9-211ENST00000601170 TGFBR2P37173 567 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 CRATP43155 626 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TLE2Q04725 743 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TEAD4Q15561 434 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 POM121L1PQ3SYA9 428 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 ZNF385BQ569K4 471 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TSEN54Q7Z6J9 526 aaKnown RBP13.91□□□□□ -0.18
SMG9-211ENST00000601170 P3H2Q8IVL5 708 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 KLHDC8AQ8IYD2 350 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 CYB5D2Q8WUJ1 264 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 SORCS1Q8WY21 1168 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 ITFG2Q969R8 447 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TAMM41Q96BW9 452 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 FAM83CQ9BQN1 747 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 NEURL2Q9BR09 285 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 BTBD2Q9BX70 525 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 MROQ9BYG7 248 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 FBXO8Q9NRD0 319 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TMEM184CQ9NVA4 438 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 GPATCH2Q9NW75 528 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 HCFC1R1Q9NWW0 138 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 MAPRE3Q9UPY8 281 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 EXO1Q9UQ84 846 aaKnown RBP13.91□□□□□ -0.18
SMG9-211ENST00000601170 RNF6Q9Y252 685 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 LYVE1Q9Y5Y7 322 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TMEM247A6NEH6 219 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 RNASET2O00584 256 aaKnown RBP13.91□□□□□ -0.18
SMG9-211ENST00000601170 VIPP01282 170 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 BMP4P12644 408 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TIMP2P16035 220 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 PDHA2P29803 388 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TGFBR1P36897 503 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 PRLHRP49683 370 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 SELENOWP63302 87 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 PCDH1Q08174 1060 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 INAQ16352 499 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TRIM60Q495X7 471 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 ZNF852Q6ZMS4 543 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 MFSD4AQ8N468 514 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 OR4K1Q8NGD4 311 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 OR6Q1Q8NGQ2 317 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 GLYATL1Q969I3 302 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 LGALS12Q96DT0 336 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 CCM2Q9BSQ5 444 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 ZBP1Q9H171 429 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 MTG2Q9H4K7 406 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 NDUFAF4Q9P032 175 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 AP1M2Q9Y6Q5 423 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 PCM1Q15154 2024 aa13.91□□□□□ -0.18
SMG9-211ENST00000601170 TTC34A8MYJ7 566 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 TNFRSF11BO00300 401 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 ETFAP13804 333 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 MVDP53602 400 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 IFITM3Q01628 133 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 TMEM115Q12893 351 aaPredicted RBP13.9□□□□□ -0.18
SMG9-211ENST00000601170 COX20Q5RI15 118 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 MED27Q6P2C8 311 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 PHF10Q8WUB8 498 aaKnown RBP13.9□□□□□ -0.18
SMG9-211ENST00000601170 IRF7Q92985 503 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 FOPNLQ96NB1 174 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 FEVQ99581 238 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 NFKBIL1Q9UBC1 381 aaPredicted RBP13.9□□□□□ -0.18
SMG9-211ENST00000601170 KCNE2Q9Y6J6 123 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 LTBP2Q14767 1821 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 CLDN24A6NM45 220 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 ZBBXA8MT70 800 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 ADAMDEC1O15204 470 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 GBAP04062 536 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 CTSLP07711 333 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 HLA-EP13747 358 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 XPAP23025 273 aaPredicted RBP13.9□□□□□ -0.18
SMG9-211ENST00000601170 GRK3P35626 688 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 HBA1P69905 142 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 PPIGQ13427 754 aaKnown RBP eCLIP13.9□□□□□ -0.184e-6■■□□□ 12.2
SMG9-211ENST00000601170 HIST2H2ACQ16777 129 aaPredicted RBP13.9□□□□□ -0.18
SMG9-211ENST00000601170 CATSPEREQ5SY80 951 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 UBE2UQ5VVX9 321 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 TMEM220Q6QAJ8 160 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 SLC39A5Q6ZMH5 540 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 SLCO4C1Q6ZQN7 724 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 CCDC149Q6ZUS6 474 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 OTOP2Q7RTS6 562 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 KREMEN2Q8NCW0 462 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 TCEAL4Q96EI5 215 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 VPS35Q96QK1 796 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 COPS4Q9BT78 406 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 ITPAQ9BY32 194 aa13.9□□□□□ -0.18
SMG9-211ENST00000601170 BHLHE41Q9C0J9 482 aaPredicted RBP13.9□□□□□ -0.18
SMG9-211ENST00000601170 SLIRPQ9GZT3 109 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms