RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 NAA30Q147X3 362 aaPredicted RBP14.92□□□□□ -0.02
RPS28-203ENST00000600659 SETDB1Q15047 1291 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 NDUFA9Q16795 377 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 FAM83EQ2M2I3 478 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 KIRREL2Q6UWL6 708 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 TIFABQ6ZNK6 161 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 SMIM10Q96HG1 83 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 AIF1LQ9BQI0 150 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 EHD1Q9H4M9 534 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 CNOT10Q9H9A5 744 aaKnown RBP14.92□□□□□ -0.02
RPS28-203ENST00000600659 P4HTMQ9NXG6 502 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 FETUBQ9UGM5 382 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 TP53TG5Q9Y2B4 290 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 A0A1W2PQ72 361 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 ESPNB1AK53 854 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 SGK494L7N484 410 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 JRKO75564 520 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 WFS1O76024 890 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 KLHL18O94889 574 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 SHBGP04278 402 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 SNRPAP09012 282 aaKnown RBP14.92□□□□□ -0.02
RPS28-203ENST00000600659 VSNL1P62760 191 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 NFATC3Q12968 1075 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 PDK4Q16654 411 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 MED25Q71SY5 747 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 PRSS58Q8IYP2 241 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 TMEM102Q8N9M5 508 aaPredicted RBP14.92□□□□□ -0.02
RPS28-203ENST00000600659 C9orf43Q8TAL5 461 aaPredicted RBP14.92□□□□□ -0.02
RPS28-203ENST00000600659 UTP15Q8TED0 518 aaKnown RBP14.92□□□□□ -0.02
RPS28-203ENST00000600659 NACC2Q96BF6 587 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 MIEF2Q96C03 454 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 CRB3Q9BUF7 120 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 KLHL31Q9H511 634 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 NT5DC2Q9H857 520 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 TRPC4Q9UBN4 977 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 ZNF490Q9ULM2 529 aaPredicted RBP14.92□□□□□ -0.02
RPS28-203ENST00000600659 PCDHGA9Q9Y5G4 932 aaKnown RBP14.92□□□□□ -0.02
RPS28-203ENST00000600659 SYCE1LA8MT33 242 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 K7EPI3 171 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 AGPSO00116 658 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 PRPF4O43172 522 aaKnown RBP eCLIP14.91□□□□□ -0.02
RPS28-203ENST00000600659 CCNT2O60583 730 aaKnown RBP14.91□□□□□ -0.02
RPS28-203ENST00000600659 GALR3O60755 368 aaPredicted RBP14.91□□□□□ -0.02
RPS28-203ENST00000600659 ALOX12BO75342 701 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 RDH16O75452 317 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 BMP10O95393 424 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 SFTPCP11686 197 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 HNRNPH1P31943 449 aaKnown RBP14.91□□□□□ -0.02
RPS28-203ENST00000600659 CASP2P42575 452 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 DOC2AQ14183 400 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 TBCCQ15814 346 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 DCAF10Q5QP82 559 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 TCTN3Q6NUS6 607 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 TAOK1Q7L7X3 1001 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 FDCSPQ8NFU4 85 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 OR11G2Q8NGC1 345 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 OR5T3Q8NGG3 340 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 IP6K3Q96PC2 410 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 NUDT9Q9BW91 350 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 CAPS2Q9BXY5 557 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 MKKSQ9NPJ1 570 aaPredicted RBP14.91□□□□□ -0.02
RPS28-203ENST00000600659 ZNF71Q9NQZ8 489 aaPredicted RBP14.91□□□□□ -0.02
RPS28-203ENST00000600659 SEMA3GQ9NS98 782 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 C14orf105Q9NVL8 296 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 HCN3Q9P1Z3 774 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 XPR1Q9UBH6 696 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 C3orf18Q9UK00 162 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 FBXL4Q9UKA2 621 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 NAALAD2Q9Y3Q0 740 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 IKBKGQ9Y6K9 419 aa14.91□□□□□ -0.02
RPS28-203ENST00000600659 CPAMD8Q8IZJ3 1885 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 ZNF860A6NHJ4 632 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 EIF4E1BA6NMX2 242 aaKnown RBP14.9□□□□□ -0.02
RPS28-203ENST00000600659 IDSB3KWA1 339 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 B8ZZF3 427 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 MKRN2OSH3BPM6 223 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 SIX3O95343 332 aaPredicted RBP14.9□□□□□ -0.02
RPS28-203ENST00000600659 S100BP04271 92 aaPredicted RBP14.9□□□□□ -0.02
RPS28-203ENST00000600659 SERPINA6P08185 405 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 ZNF888P0CJ79 500 aaPredicted RBP14.9□□□□□ -0.02
RPS28-203ENST00000600659 COL6A2P12110 1019 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 ALOX12P18054 663 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 AVPR1BP47901 424 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 CCL11P51671 97 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 OCA2Q04671 838 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 RBBP5Q15291 538 aaKnown RBP14.9□□□□□ -0.02
RPS28-203ENST00000600659 PCBP2Q15366 365 aaKnown RBP eCLIP14.9□□□□□ -0.02
RPS28-203ENST00000600659 PFKFB4Q16877 469 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 ADPRMQ3LIE5 342 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 TMIGD1Q6UXZ0 262 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 AMER2Q8N7J2 671 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 SNX31Q8N9S9 440 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 TRPV3Q8NET8 790 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 OR51Q1Q8NH59 317 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 PTCD3Q96EY7 689 aaKnown RBP14.9□□□□□ -0.02
RPS28-203ENST00000600659 PITHD1Q9GZP4 211 aaPredicted RBP14.9□□□□□ -0.02
RPS28-203ENST00000600659 ANKHQ9HCJ1 492 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 ACSS2Q9NR19 701 aa14.9□□□□□ -0.02
RPS28-203ENST00000600659 CNTRLQ7Z7A1 2325 aa14.89□□□□□ -0.03
RPS28-203ENST00000600659 E2F3O00716 465 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms